RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C MED11Q99278 115 aa1.78□□□□□ -2.12
RRP42YDL111C YBT1P32386 1661 aa1.77□□□□□ -2.13
RRP42YDL111C BEM2P39960 2167 aaKnown RBP1.77□□□□□ -2.13
RRP42YDL111C SWM2P40342 146 aa1.77□□□□□ -2.13
RRP42YDL111C MPC1P53157 130 aaKnown RBP1.77□□□□□ -2.13
RRP42YDL111C SAE3P89114 91 aa1.77□□□□□ -2.13
RRP42YDL111C FRQ1Q06389 190 aa1.77□□□□□ -2.13
RRP42YDL111C VAM10Q08474 114 aa1.77□□□□□ -2.13
RRP42YDL111C SEC7P11075 2009 aaKnown RBP1.77□□□□□ -2.13
RRP42YDL111C VAR1P02381 398 aa1.76□□□□□ -2.13
RRP42YDL111C YHR212W-AP0CX91 67 aa1.76□□□□□ -2.13
RRP42YDL111C QCR10P37299 77 aa1.76□□□□□ -2.13
RRP42YDL111C ATG8P38182 117 aaRIP-Chip data1.76□□□□□ -2.13not detected
RRP42YDL111C YBR027CP38220 110 aa1.76□□□□□ -2.13
RRP42YDL111C AIM36Q03798 255 aa1.76□□□□□ -2.13
RRP42YDL111C RIF1P29539 1916 aa1.76□□□□□ -2.13
RRP42YDL111C BCK1Q01389 1478 aa1.75□□□□□ -2.13
RRP42YDL111C TY2B-LR1P0C2J3 1770 aa1.75□□□□□ -2.13
RRP42YDL111C TY2B-FP0CX63 1770 aa1.75□□□□□ -2.13
RRP42YDL111C TY2B-GR2P0CX64 1770 aa1.75□□□□□ -2.13
RRP42YDL111C TY2B-CP25384 1770 aa1.75□□□□□ -2.13
RRP42YDL111C TY2B-DR2Q03494 1770 aa1.75□□□□□ -2.13
RRP42YDL111C TY1B-DR1Q03855 1755 aa1.75□□□□□ -2.13
RRP42YDL111C TY2B-DR3Q07791 1770 aaKnown RBP1.75□□□□□ -2.13
RRP42YDL111C TY2B-OR1Q12113 1770 aa1.75□□□□□ -2.13
RRP42YDL111C TY2B-DR1Q12472 1770 aa1.75□□□□□ -2.13
RRP42YDL111C TY2B-BQ12491 1770 aa1.75□□□□□ -2.13
RRP42YDL111C TY2B-OR2Q12501 1770 aa1.75□□□□□ -2.13
RRP42YDL111C TY1B-DR3Q99231 1755 aa1.75□□□□□ -2.13
RRP42YDL111C RPA190P10964 1664 aaKnown RBP1.75□□□□□ -2.13
RRP42YDL111C DOP1Q03921 1698 aa1.75□□□□□ -2.13
RRP42YDL111C SRB6P32570 121 aa1.75□□□□□ -2.13
RRP42YDL111C YGL149WP53116 101 aa1.75□□□□□ -2.13
RRP42YDL111C ERV14P53173 138 aa1.75□□□□□ -2.13
RRP42YDL111C ARL3Q02804 198 aa1.75□□□□□ -2.13
RRP42YDL111C YLR099W-AQ3E798 87 aa1.75□□□□□ -2.13
RRP42YDL111C ACC1Q00955 2233 aaKnown RBP1.75□□□□□ -2.13
RRP42YDL111C RPO21P04050 1733 aaKnown RBP1.74□□□□□ -2.13
RRP42YDL111C CHC1P22137 1653 aaKnown RBP1.74□□□□□ -2.13
RRP42YDL111C NTE1Q04958 1679 aa1.74□□□□□ -2.13
RRP42YDL111C YOR093CQ12275 1648 aa1.74□□□□□ -2.13
RRP42YDL111C FUN14P18411 198 aa1.74□□□□□ -2.13
RRP42YDL111C SFT2P38166 215 aa1.74□□□□□ -2.13
RRP42YDL111C YHL037CP38733 133 aa1.74□□□□□ -2.13
RRP42YDL111C HSP10P38910 106 aa1.74□□□□□ -2.13
RRP42YDL111C GNA1P43577 159 aaPredicted RBP1.74□□□□□ -2.13
RRP42YDL111C DCV1P43595 202 aa1.74□□□□□ -2.13
RRP42YDL111C AIM11P87275 137 aa1.74□□□□□ -2.13
RRP42YDL111C APS2Q00381 147 aa1.74□□□□□ -2.13
RRP42YDL111C YPL067CQ02754 198 aa1.74□□□□□ -2.13
RRP42YDL111C TY1B-HO13535 1793 aa1.74□□□□□ -2.13
RRP42YDL111C TY1B-DR5P0C2I2 1755 aa1.74□□□□□ -2.13
RRP42YDL111C TY1B-DR6P0C2I3 1755 aa1.74□□□□□ -2.13
RRP42YDL111C TY1B-LR2P0C2I5 1755 aa1.74□□□□□ -2.13
RRP42YDL111C TY1B-LR3P0C2I6 1755 aaKnown RBP1.74□□□□□ -2.13
RRP42YDL111C TY1B-PR1P0C2I9 1755 aaKnown RBP1.74□□□□□ -2.13
RRP42YDL111C TY1B-PR2P0C2J0 1756 aa1.74□□□□□ -2.13
RRP42YDL111C TY1B-PR3P0C2J1 1755 aaKnown RBP1.74□□□□□ -2.13
RRP42YDL111C URB1P34241 1764 aaKnown RBP1.74□□□□□ -2.13
RRP42YDL111C TY1B-JR1P47098 1755 aa1.74□□□□□ -2.13
RRP42YDL111C TY1B-ML2Q03434 1755 aaKnown RBP1.74□□□□□ -2.13
RRP42YDL111C TY1B-ER1Q03612 1755 aa1.74□□□□□ -2.13
RRP42YDL111C TY1B-ML1Q04711 1755 aaKnown RBP1.74□□□□□ -2.13
RRP42YDL111C TY1B-GR2Q12269 1755 aa1.74□□□□□ -2.13
RRP42YDL111C TY1B-OLQ12273 1755 aa1.74□□□□□ -2.13
RRP42YDL111C TY1B-PLQ12414 1755 aaKnown RBP1.74□□□□□ -2.13
RRP42YDL111C RRP5Q05022 1729 aaKnown RBP1.74□□□□□ -2.13
RRP42YDL111C DNF3Q12674 1656 aa1.74□□□□□ -2.13
RRP42YDL111C YCR101CP25607 182 aa1.73□□□□□ -2.13
RRP42YDL111C AIM18P38884 321 aa1.73□□□□□ -2.13
RRP42YDL111C RGI1P40043 161 aaPredicted RBP1.73□□□□□ -2.13
RRP42YDL111C RPS12P48589 143 aaKnown RBP1.73□□□□□ -2.13
RRP42YDL111C FYV7Q12247 151 aa1.73□□□□□ -2.13
RRP42YDL111C YLR118CQ12354 227 aa1.73□□□□□ -2.13
RRP42YDL111C BUD3P25558 1636 aa1.73□□□□□ -2.13
RRP42YDL111C UTP10P42945 1769 aaKnown RBP1.72□□□□□ -2.13
RRP42YDL111C APC1P53886 1748 aa1.72□□□□□ -2.13
RRP42YDL111C SPO14P36126 1683 aa1.72□□□□□ -2.13
RRP42YDL111C HAP3P13434 144 aa1.72□□□□□ -2.13
RRP42YDL111C YFL051CP43552 160 aa1.72□□□□□ -2.13
RRP42YDL111C PCC1Q3E833 88 aa1.72□□□□□ -2.13
RRP42YDL111C COA6Q3E846 104 aa1.72□□□□□ -2.13
RRP42YDL111C NUP192P47054 1683 aa1.71□□□□□ -2.14
RRP42YDL111C RPL33AP05744 107 aaKnown RBP1.71□□□□□ -2.14
RRP42YDL111C YFR010W-AP0C5N0 62 aa1.71□□□□□ -2.14
RRP42YDL111C PAU21P0CE86 164 aa1.71□□□□□ -2.14
RRP42YDL111C PAU22P0CE87 164 aa1.71□□□□□ -2.14
RRP42YDL111C LHP1P33399 275 aaKnown RBP1.71□□□□□ -2.14
RRP42YDL111C SSS1P35179 80 aa1.71□□□□□ -2.14
RRP42YDL111C SNN1P48232 102 aa1.71□□□□□ -2.14
RRP42YDL111C BRP1P53194 125 aa1.71□□□□□ -2.14
RRP42YDL111C SED1Q01589 338 aa1.71□□□□□ -2.14
RRP42YDL111C RUB1Q03919 77 aa1.71□□□□□ -2.14
RRP42YDL111C SEN15Q04675 128 aa1.71□□□□□ -2.14
RRP42YDL111C YOL131WQ08270 108 aa1.71□□□□□ -2.14
RRP42YDL111C MHF2Q3E829 80 aa1.71□□□□□ -2.14
RRP42YDL111C SUS1Q6WNK7 96 aa1.71□□□□□ -2.14
RRP42YDL111C TY1B-BRQ12193 1756 aa1.71□□□□□ -2.14
RRP42YDL111C TY1B-GR3Q12316 1755 aa1.71□□□□□ -2.14
RRP42YDL111C TY1B-ORQ92393 1755 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 106.4 ms