RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C RAF1Q06891 181 aa1.78□□□□□ -2.12
UBX3YDL091C YOR186WQ08560 144 aa1.78□□□□□ -2.12
UBX3YDL091C YOR268CQ08734 132 aa1.78□□□□□ -2.12
UBX3YDL091C VPS68Q12016 184 aa1.78□□□□□ -2.12
UBX3YDL091C YIL102C-AQ2V2P5 75 aa1.78□□□□□ -2.12
UBX3YDL091C MHF1Q3E835 90 aa1.78□□□□□ -2.12
UBX3YDL091C KSH1Q8TGJ3 72 aa1.78□□□□□ -2.12
UBX3YDL091C FKS3Q04952 1785 aa1.78□□□□□ -2.12
UBX3YDL091C YOL162WP0CF19 215 aa1.77□□□□□ -2.13
UBX3YDL091C TOM6P33448 61 aa1.77□□□□□ -2.13
UBX3YDL091C ATX1P38636 73 aa1.77□□□□□ -2.13
UBX3YDL091C YHL018WP38744 120 aaPredicted RBP1.77□□□□□ -2.13
UBX3YDL091C SVP26P38869 228 aa1.77□□□□□ -2.13
UBX3YDL091C NSA2P40078 261 aaKnown RBP1.77□□□□□ -2.13
UBX3YDL091C CCS1P40202 249 aaKnown RBP1.77□□□□□ -2.13
UBX3YDL091C GAT4P40569 121 aa1.77□□□□□ -2.13
UBX3YDL091C FIP1P45976 327 aa1.77□□□□□ -2.13
UBX3YDL091C EMC4P53073 190 aa1.77□□□□□ -2.13
UBX3YDL091C YGL193CP53097 103 aa1.77□□□□□ -2.13
UBX3YDL091C RSM19P53733 91 aaPredicted RBP1.77□□□□□ -2.13
UBX3YDL091C BUD25P85052 153 aa1.77□□□□□ -2.13
UBX3YDL091C YML079WQ03629 201 aa1.77□□□□□ -2.13
UBX3YDL091C YDL180WQ12301 547 aa1.77□□□□□ -2.13
UBX3YDL091C YLR363W-AQ3E747 85 aa1.77□□□□□ -2.13
UBX3YDL091C HTL1Q9URQ5 78 aa1.77□□□□□ -2.13
UBX3YDL091C MSB2P32334 1306 aa1.77□□□□□ -2.13
UBX3YDL091C UBC4P15731 148 aa1.76□□□□□ -2.13
UBX3YDL091C YGL010WP25338 174 aa1.76□□□□□ -2.13
UBX3YDL091C YCR099CP25657 155 aa1.76□□□□□ -2.13
UBX3YDL091C UMP1P38293 148 aa1.76□□□□□ -2.13
UBX3YDL091C EMC5P40540 141 aa1.76□□□□□ -2.13
UBX3YDL091C PHS1P40857 217 aa1.76□□□□□ -2.13
UBX3YDL091C CWP2P43497 92 aa1.76□□□□□ -2.13
UBX3YDL091C PAU5P43575 122 aa1.76□□□□□ -2.13
UBX3YDL091C YGL034CP53186 121 aa1.76□□□□□ -2.13
UBX3YDL091C COX12Q01519 83 aa1.76□□□□□ -2.13
UBX3YDL091C NMA1Q06178 401 aaKnown RBP1.76□□□□□ -2.13
UBX3YDL091C YOL160WQ08321 113 aa1.76□□□□□ -2.13
UBX3YDL091C YPL162CQ12042 273 aa1.76□□□□□ -2.13
UBX3YDL091C MPD1Q12404 318 aaKnown RBP1.76□□□□□ -2.13
UBX3YDL091C YKL023C-AQ2V2P3 75 aa1.76□□□□□ -2.13
UBX3YDL091C YDR119W-AQ2V2P9 66 aa1.76□□□□□ -2.13
UBX3YDL091C YFL041W-AQ3E817 63 aa1.76□□□□□ -2.13
UBX3YDL091C YOR020W-AQ3E824 90 aa1.76□□□□□ -2.13
UBX3YDL091C ATG40Q99325 256 aa1.76□□□□□ -2.13
UBX3YDL091C MOT1P32333 1867 aa1.76□□□□□ -2.13
UBX3YDL091C RIM15P43565 1770 aa1.76□□□□□ -2.13
UBX3YDL091C RIF1P29539 1916 aa1.76□□□□□ -2.13
UBX3YDL091C FKS1P38631 1876 aaKnown RBP1.75□□□□□ -2.13
UBX3YDL091C RPL40AP0CH08 128 aaKnown RBP1.75□□□□□ -2.13
UBX3YDL091C RPL40BP0CH09 128 aaKnown RBP1.75□□□□□ -2.13
UBX3YDL091C SPO13P23624 291 aa1.75□□□□□ -2.13
UBX3YDL091C YCR050CP25630 102 aa1.75□□□□□ -2.13
UBX3YDL091C APS1P35181 156 aa1.75□□□□□ -2.13
UBX3YDL091C PEP8P40335 379 aa1.75□□□□□ -2.13
UBX3YDL091C YLR296WQ05898 108 aa1.75□□□□□ -2.13
UBX3YDL091C YOR385WQ08909 290 aa1.75□□□□□ -2.13
UBX3YDL091C POC4Q12245 148 aaPredicted RBP1.75□□□□□ -2.13
UBX3YDL091C EMC6Q12431 108 aa1.75□□□□□ -2.13
UBX3YDL091C YMR175W-AQ3E766 64 aa1.75□□□□□ -2.13
UBX3YDL091C TSC3Q3E790 80 aa1.75□□□□□ -2.13
UBX3YDL091C Q0255P03881 472 aa1.74□□□□□ -2.13
UBX3YDL091C MDH2P22133 377 aa1.74□□□□□ -2.13
UBX3YDL091C RPL14AP36105 138 aaKnown RBP1.74□□□□□ -2.13
UBX3YDL091C PHO88P38264 188 aaPredicted RBP1.74□□□□□ -2.13
UBX3YDL091C YHR125WP38831 101 aa1.74□□□□□ -2.13
UBX3YDL091C SNF11P38956 169 aa1.74□□□□□ -2.13
UBX3YDL091C YAR029WP39549 74 aa1.74□□□□□ -2.13
UBX3YDL091C MPM1P40364 252 aa1.74□□□□□ -2.13
UBX3YDL091C MIC27P50945 234 aa1.74□□□□□ -2.13
UBX3YDL091C POP3P53833 195 aaPredicted RBP1.74□□□□□ -2.13
UBX3YDL091C MIX14Q04341 121 aa1.74□□□□□ -2.13
UBX3YDL091C COX19Q3E731 98 aa1.74□□□□□ -2.13
UBX3YDL091C GSC2P40989 1895 aa1.74□□□□□ -2.13
UBX3YDL091C SLH1P53327 1967 aaKnown RBP1.74□□□□□ -2.13
UBX3YDL091C MRS4P23500 304 aa1.73□□□□□ -2.13
UBX3YDL091C AHT1P29589 182 aa1.73□□□□□ -2.13
UBX3YDL091C MSA2P36157 363 aa1.73□□□□□ -2.13
UBX3YDL091C CSH1P38287 376 aa1.73□□□□□ -2.13
UBX3YDL091C YHL042WP38729 150 aa1.73□□□□□ -2.13
UBX3YDL091C YAR068WP39564 161 aa1.73□□□□□ -2.13
UBX3YDL091C YER134CP40081 178 aa1.73□□□□□ -2.13
UBX3YDL091C YJR146WP47174 117 aa1.73□□□□□ -2.13
UBX3YDL091C SPG1P50088 95 aa1.73□□□□□ -2.13
UBX3YDL091C KNH1P50112 268 aa1.73□□□□□ -2.13
UBX3YDL091C PET191Q02772 108 aa1.73□□□□□ -2.13
UBX3YDL091C ATG41Q12048 136 aa1.73□□□□□ -2.13
UBX3YDL091C YPL038W-AQ3E7B4 63 aa1.73□□□□□ -2.13
UBX3YDL091C YHR214C-EQ8TGK0 99 aa1.73□□□□□ -2.13
UBX3YDL091C ODC2Q99297 307 aa1.73□□□□□ -2.13
UBX3YDL091C APC1P53886 1748 aa1.73□□□□□ -2.13
UBX3YDL091C URA5P13298 226 aaKnown RBP1.72□□□□□ -2.13
UBX3YDL091C SEC11P15367 167 aa1.72□□□□□ -2.13
UBX3YDL091C NHP2P32495 156 aaPredicted RBP1.72□□□□□ -2.13
UBX3YDL091C YBR292CP38357 123 aa1.72□□□□□ -2.13
UBX3YDL091C YER181CP40097 107 aa1.72□□□□□ -2.13
UBX3YDL091C TOS8P53147 276 aa1.72□□□□□ -2.13
UBX3YDL091C YDR042CQ03205 200 aa1.72□□□□□ -2.13
UBX3YDL091C GPI19Q04082 140 aa1.72□□□□□ -2.13
UBX3YDL091C YMR252CQ04814 134 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 136 ms