RNA–Protein interactions for RNA: YCR077C

PAT1, Transcript of Deadenylation-dependent mRNA-decapping factor, yeast

Gene PAT1, Length 2,391 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAT1	YCR077C	RAF1	Q06891	181 aa		4.92	□□□□□ -1.62
PAT1	YCR077C	MSA1	Q08471	629 aa		4.92	□□□□□ -1.62
PAT1	YCR077C	YGL015C	P33199	130 aa		4.92	□□□□□ -1.62
PAT1	YCR077C	YAR068W	P39564	161 aa		4.92	□□□□□ -1.62
PAT1	YCR077C	YNR071C	P53757	342 aa		4.92	□□□□□ -1.62
PAT1	YCR077C	NCE102	Q12207	173 aa	RIP-Chip data	4.92	□□□□□ -1.62	not detected
PAT1	YCR077C	YCL021W-A	Q96VH3	125 aa		4.92	□□□□□ -1.62
PAT1	YCR077C	YAR029W	P39549	74 aa		4.91	□□□□□ -1.62
PAT1	YCR077C	PEX22	P39718	180 aa		4.91	□□□□□ -1.62
PAT1	YCR077C	YIL029C	P40538	142 aa		4.91	□□□□□ -1.62
PAT1	YCR077C	YLR296W	Q05898	108 aa		4.91	□□□□□ -1.62
PAT1	YCR077C	GLT1	Q12680	2145 aa	Known RBP	4.91	□□□□□ -1.62
PAT1	YCR077C	YGL258W-A	Q3E740	77 aa		4.91	□□□□□ -1.62
PAT1	YCR077C	TRP1	P00912	224 aa		4.91	□□□□□ -1.62
PAT1	YCR077C	RPL2A	P0CX45	254 aa	Known RBP	4.91	□□□□□ -1.62
PAT1	YCR077C	RPL2B	P0CX46	254 aa	Known RBP	4.91	□□□□□ -1.62
PAT1	YCR077C	MRS3	P10566	314 aa		4.91	□□□□□ -1.62
PAT1	YCR077C	RPA12	P32529	125 aa	Known RBP	4.91	□□□□□ -1.62
PAT1	YCR077C	YHR173C	P38864	112 aa		4.91	□□□□□ -1.62
PAT1	YCR077C	POP3	P53833	195 aa	Predicted RBP	4.91	□□□□□ -1.62
PAT1	YCR077C	MRX11	Q03079	207 aa		4.91	□□□□□ -1.62
PAT1	YCR077C	KSH1	Q8TGJ3	72 aa		4.91	□□□□□ -1.62
PAT1	YCR077C	YMR316C-A	I2HB70	103 aa		4.9	□□□□□ -1.62
PAT1	YCR077C	YCR006C	P25350	157 aa		4.9	□□□□□ -1.62
PAT1	YCR077C	YLR412C-A	Q3E742	68 aa		4.9	□□□□□ -1.62
PAT1	YCR077C	YNL277W-A	Q3E7Z0	62 aa		4.9	□□□□□ -1.62
PAT1	YCR077C	YFL041W-A	Q3E817	63 aa		4.9	□□□□□ -1.62
PAT1	YCR077C	OST1	P41543	476 aa	Known RBP	4.9	□□□□□ -1.63
PAT1	YCR077C	PGU1	P47180	361 aa		4.9	□□□□□ -1.63
PAT1	YCR077C	SDS23	P53172	527 aa		4.9	□□□□□ -1.63
PAT1	YCR077C	AYT1	Q12226	474 aa		4.9	□□□□□ -1.63
PAT1	YCR077C	YLR302C	O13544	120 aa		4.89	□□□□□ -1.63
PAT1	YCR077C	NRG2	P38082	220 aa		4.89	□□□□□ -1.63
PAT1	YCR077C	YBR126W-A	Q8TGU7	68 aa		4.89	□□□□□ -1.63
PAT1	YCR077C	RPL23A	P0CX41	137 aa	Known RBP	4.89	□□□□□ -1.63
PAT1	YCR077C	RPL23B	P0CX42	137 aa	Known RBP	4.89	□□□□□ -1.63
PAT1	YCR077C	IES6	P32617	166 aa		4.89	□□□□□ -1.63
PAT1	YCR077C	API2	Q04413	109 aa		4.89	□□□□□ -1.63
PAT1	YCR077C	RFM1	Q12192	310 aa		4.89	□□□□□ -1.63
PAT1	YCR077C	YIL046W-A	Q3E7Z4	54 aa		4.89	□□□□□ -1.63
PAT1	YCR077C	FPR2	P32472	135 aa		4.88	□□□□□ -1.63
PAT1	YCR077C	YHP1	Q04116	353 aa		4.88	□□□□□ -1.63
PAT1	YCR077C	GAT3	Q07928	141 aa		4.88	□□□□□ -1.63
PAT1	YCR077C	YHR214C-D	P0CX93	97 aa		4.87	□□□□□ -1.63
PAT1	YCR077C	FZF1	P32805	299 aa		4.87	□□□□□ -1.63
PAT1	YCR077C	UBC13	P52490	153 aa		4.87	□□□□□ -1.63
PAT1	YCR077C	YLR281C	Q05863	155 aa		4.87	□□□□□ -1.63
PAT1	YCR077C	FIT2	Q08906	153 aa		4.87	□□□□□ -1.63
PAT1	YCR077C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
PAT1	YCR077C	SMP1	P38128	452 aa		4.87	□□□□□ -1.63
PAT1	YCR077C	YPT10	P38146	199 aa		4.87	□□□□□ -1.63
PAT1	YCR077C	YBL081W	P38180	368 aa	Known RBP	4.87	□□□□□ -1.63
PAT1	YCR077C	GPI18	P38211	433 aa		4.87	□□□□□ -1.63
PAT1	YCR077C	REE1	P40893	198 aa		4.87	□□□□□ -1.63
PAT1	YCR077C	MST27	P53176	234 aa		4.87	□□□□□ -1.63
PAT1	YCR077C	HST4	P53688	370 aa		4.87	□□□□□ -1.63
PAT1	YCR077C	MRPL31	P14063	131 aa	Predicted RBP	4.86	□□□□□ -1.63
PAT1	YCR077C	HSP12	P22943	109 aa	Known RBP	4.86	□□□□□ -1.63
PAT1	YCR077C	TIM18	Q08749	192 aa		4.86	□□□□□ -1.63
PAT1	YCR077C	YKL023C-A	Q2V2P3	75 aa		4.86	□□□□□ -1.63
PAT1	YCR077C	PBI2	P0CT04	75 aa	Known RBP	4.86	□□□□□ -1.63
PAT1	YCR077C	YHL018W	P38744	120 aa	Predicted RBP	4.86	□□□□□ -1.63
PAT1	YCR077C	MBB1	P39534	108 aa		4.86	□□□□□ -1.63
PAT1	YCR077C	VPS55	P47111	140 aa		4.86	□□□□□ -1.63
PAT1	YCR077C	YIL014C-A	Q02598	104 aa		4.86	□□□□□ -1.63
PAT1	YCR077C	PIS1	P06197	220 aa	Known RBP	4.85	□□□□□ -1.63
PAT1	YCR077C	YHR140W	P38842	239 aa		4.85	□□□□□ -1.63
PAT1	YCR077C	YPL073C	P40323	161 aa		4.85	□□□□□ -1.63
PAT1	YCR077C	HUA1	P40325	198 aa		4.85	□□□□□ -1.63
PAT1	YCR077C	YPI1	P43587	155 aa		4.85	□□□□□ -1.63
PAT1	YCR077C	TOM7	P53507	60 aa		4.85	□□□□□ -1.63
PAT1	YCR077C	MIX17	Q03667	156 aa		4.85	□□□□□ -1.63
PAT1	YCR077C	IRC25	Q07951	179 aa		4.85	□□□□□ -1.63
PAT1	YCR077C	DFM1	Q12743	341 aa	Known RBP	4.85	□□□□□ -1.63
PAT1	YCR077C	RPL18A	P0CX49	186 aa	Known RBP	4.84	□□□□□ -1.63
PAT1	YCR077C	RPL18B	P0CX50	186 aa	Known RBP	4.84	□□□□□ -1.63
PAT1	YCR077C	YKL044W	P36092	106 aa		4.84	□□□□□ -1.63
PAT1	YCR077C	YHL042W	P38729	150 aa		4.84	□□□□□ -1.63
PAT1	YCR077C	RPL28	P02406	149 aa	Known RBP	4.84	□□□□□ -1.64
PAT1	YCR077C	TOM6	P33448	61 aa		4.84	□□□□□ -1.64
PAT1	YCR077C	YDR209C	Q03480	137 aa		4.84	□□□□□ -1.64
PAT1	YCR077C	HTL1	Q9URQ5	78 aa		4.84	□□□□□ -1.64
PAT1	YCR077C	SFT2	P38166	215 aa		4.83	□□□□□ -1.64
PAT1	YCR077C	PAU7	P39545	55 aa		4.83	□□□□□ -1.64
PAT1	YCR077C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
PAT1	YCR077C	RRT15	Q3E811	62 aa		4.83	□□□□□ -1.64
PAT1	YCR077C	YHR139C-A	O13536	103 aa		4.83	□□□□□ -1.64
PAT1	YCR077C	CSH1	P38287	376 aa		4.83	□□□□□ -1.64
PAT1	YCR077C	SVP26	P38869	228 aa		4.83	□□□□□ -1.64
PAT1	YCR077C	GLO1	P50107	326 aa		4.83	□□□□□ -1.64
PAT1	YCR077C	RRS1	Q08746	203 aa	Known RBP	4.83	□□□□□ -1.64
PAT1	YCR077C	YER181C	P40097	107 aa		4.82	□□□□□ -1.64
PAT1	YCR077C	YMR317W	Q04893	1140 aa		4.82	□□□□□ -1.64
PAT1	YCR077C	SPO24	Q3E752	67 aa		4.82	□□□□□ -1.64
PAT1	YCR077C	UTH1	P36135	365 aa		4.81	□□□□□ -1.64
PAT1	YCR077C	RRT13	P40042	185 aa		4.81	□□□□□ -1.64
PAT1	YCR077C	YGR018C	P53211	109 aa		4.81	□□□□□ -1.64
PAT1	YCR077C	YGR164W	P53291	111 aa		4.81	□□□□□ -1.64
PAT1	YCR077C	YMR175W-A	Q3E766	64 aa		4.81	□□□□□ -1.64
PAT1	YCR077C	YPL038W-A	Q3E7B4	63 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 74.4 ms