RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B DER1P38307 211 aa-1.78□□□□□ -2.69
HTL1YCR020W-B HPM1P40481 377 aa-1.78□□□□□ -2.69
HTL1YCR020W-B RIM15P43565 1770 aa-1.79□□□□□ -2.7
HTL1YCR020W-B YLR285C-AQ3E771 56 aa-1.79□□□□□ -2.7
HTL1YCR020W-B YFR009W-AP0C5M9 85 aa-1.8□□□□□ -2.7
HTL1YCR020W-B AME1P38313 324 aa-1.8□□□□□ -2.7
HTL1YCR020W-B YDR366CP87287 132 aa-1.8□□□□□ -2.7
HTL1YCR020W-B SHU1P38751 150 aa-1.81□□□□□ -2.7
HTL1YCR020W-B TRM732Q03496 1420 aa-1.82□□□□□ -2.7
HTL1YCR020W-B CYB5P40312 120 aa-1.82□□□□□ -2.7
HTL1YCR020W-B YIL086CP40503 102 aa-1.82□□□□□ -2.7
HTL1YCR020W-B YIL014C-AQ02598 104 aa-1.82□□□□□ -2.7
HTL1YCR020W-B SPC3Q12133 184 aa-1.82□□□□□ -2.7
HTL1YCR020W-B YNL198CP40166 100 aa-1.83□□□□□ -2.7
HTL1YCR020W-B GRX3Q03835 250 aa-1.83□□□□□ -2.7
HTL1YCR020W-B ARC19P33204 171 aaKnown RBP-1.84□□□□□ -2.7
HTL1YCR020W-B RUB1Q03919 77 aa-1.84□□□□□ -2.7
HTL1YCR020W-B ATG38Q05789 226 aaKnown RBP-1.84□□□□□ -2.7
HTL1YCR020W-B RPC19P28000 142 aaKnown RBP-1.85□□□□□ -2.71
HTL1YCR020W-B RPS11AP0CX47 156 aaKnown RBP-1.86□□□□□ -2.71
HTL1YCR020W-B RPS11BP0CX48 156 aaKnown RBP-1.86□□□□□ -2.71
HTL1YCR020W-B PKR1Q03880 122 aaKnown RBP-1.86□□□□□ -2.71
HTL1YCR020W-B YMR320WQ04897 101 aa-1.86□□□□□ -2.71
HTL1YCR020W-B SLO1Q3E784 85 aa-1.86□□□□□ -2.71
HTL1YCR020W-B ERV14P53173 138 aa-1.87□□□□□ -2.71
HTL1YCR020W-B YGR164WP53291 111 aa-1.87□□□□□ -2.71
HTL1YCR020W-B YCL048W-AQ2V2Q2 79 aa-1.87□□□□□ -2.71
HTL1YCR020W-B COX19Q3E731 98 aa-1.87□□□□□ -2.71
HTL1YCR020W-B SEN1Q00416 2231 aaKnown RBP-1.88□□□□□ -2.71
HTL1YCR020W-B MPC1P53157 130 aaKnown RBP-1.89□□□□□ -2.71
HTL1YCR020W-B YGR039WP53225 103 aa-1.89□□□□□ -2.71
HTL1YCR020W-B ELC1Q03071 99 aa-1.89□□□□□ -2.71
HTL1YCR020W-B CMC2Q3E7A4 109 aa-1.89□□□□□ -2.71
HTL1YCR020W-B SEC59P20048 519 aa-1.9□□□□□ -2.71
HTL1YCR020W-B RPL14AP36105 138 aaKnown RBP-1.91□□□□□ -2.72
HTL1YCR020W-B RPL14BP38754 138 aaKnown RBP-1.91□□□□□ -2.72
HTL1YCR020W-B COX23P38824 151 aa-1.91□□□□□ -2.72
HTL1YCR020W-B TOP2P06786 1428 aaKnown RBP-1.91□□□□□ -2.72
HTL1YCR020W-B PET54P10834 293 aa-1.92□□□□□ -2.72
HTL1YCR020W-B MPC2P38857 129 aa-1.92□□□□□ -2.72
HTL1YCR020W-B GAT4P40569 121 aa-1.93□□□□□ -2.72
HTL1YCR020W-B CNL1Q06333 122 aa-1.93□□□□□ -2.72
HTL1YCR020W-B YLR363W-AQ3E747 85 aa-1.93□□□□□ -2.72
HTL1YCR020W-B YOR1P53049 1477 aa-1.94□□□□□ -2.72
HTL1YCR020W-B TVP18Q04767 167 aa-1.95□□□□□ -2.72
HTL1YCR020W-B YKL044WP36092 106 aa-1.96□□□□□ -2.72
HTL1YCR020W-B YGR042WP53227 271 aa-1.96□□□□□ -2.72
HTL1YCR020W-B GPI19Q04082 140 aa-1.96□□□□□ -2.72
HTL1YCR020W-B DNA2P38859 1522 aa-1.96□□□□□ -2.72
HTL1YCR020W-B PAU12P53343 120 aa-1.97□□□□□ -2.72
HTL1YCR020W-B OST5Q92316 86 aa-1.97□□□□□ -2.72
HTL1YCR020W-B YCR108CQ3E819 63 aa-1.98□□□□□ -2.73
HTL1YCR020W-B YIR020CP40575 100 aa-1.99□□□□□ -2.73
HTL1YCR020W-B YRF1-2P40105 1681 aa-1.99□□□□□ -2.73
HTL1YCR020W-B TY1B-BLQ12490 1755 aa-2□□□□□ -2.73
HTL1YCR020W-B HMRA2P0CY13 119 aa-2□□□□□ -2.73
HTL1YCR020W-B RPC10P40422 70 aa-2□□□□□ -2.73
HTL1YCR020W-B YOR097CQ12274 175 aaPredicted RBP-2□□□□□ -2.73
HTL1YCR020W-B PCC1Q3E833 88 aa-2□□□□□ -2.73
HTL1YCR020W-B RAD50P12753 1312 aa-2□□□□□ -2.73
HTL1YCR020W-B CYC2P38909 366 aa-2.01□□□□□ -2.73
HTL1YCR020W-B RPL22BP56628 122 aaKnown RBP-2.01□□□□□ -2.73
HTL1YCR020W-B YDR210WQ03482 75 aa-2.01□□□□□ -2.73
HTL1YCR020W-B PAM16P42949 149 aa-2.02□□□□□ -2.73
HTL1YCR020W-B IMP2P46972 177 aa-2.02□□□□□ -2.73
HTL1YCR020W-B MOG1P47123 218 aa-2.02□□□□□ -2.73
HTL1YCR020W-B YPL261CQ08976 102 aa-2.02□□□□□ -2.73
HTL1YCR020W-B YIL134C-AQ45U18 67 aa-2.02□□□□□ -2.73
HTL1YCR020W-B ACP1P32463 125 aa-2.03□□□□□ -2.73
HTL1YCR020W-B TRS20P38334 175 aa-2.03□□□□□ -2.73
HTL1YCR020W-B RBL2P48606 106 aaKnown RBP-2.03□□□□□ -2.73
HTL1YCR020W-B YNL277W-AQ3E7Z0 62 aa-2.03□□□□□ -2.73
HTL1YCR020W-B HYM1P32464 399 aa-2.04□□□□□ -2.74
HTL1YCR020W-B CAT8P39113 1433 aa-2.06□□□□□ -2.74
HTL1YCR020W-B SNF11P38956 169 aa-2.06□□□□□ -2.74
HTL1YCR020W-B YCR101CP25607 182 aa-2.07□□□□□ -2.74
HTL1YCR020W-B YHR130CP38834 111 aa-2.07□□□□□ -2.74
HTL1YCR020W-B SNN1P48232 102 aa-2.07□□□□□ -2.74
HTL1YCR020W-B YOR376W-AQ3E805 51 aa-2.07□□□□□ -2.74
HTL1YCR020W-B LSM6Q06406 86 aaKnown RBP-2.08□□□□□ -2.74
HTL1YCR020W-B PAU24P38155 120 aa-2.09□□□□□ -2.74
HTL1YCR020W-B FRQ1Q06389 190 aa-2.09□□□□□ -2.74
HTL1YCR020W-B YOL118CQ08259 102 aa-2.09□□□□□ -2.74
HTL1YCR020W-B MRPL38P35996 138 aaPredicted RBP-2.1□□□□□ -2.75
HTL1YCR020W-B Q0144Q9ZZW2 109 aa-2.1□□□□□ -2.75
HTL1YCR020W-B CHD1P32657 1468 aa-2.11□□□□□ -2.75
HTL1YCR020W-B YER187WP40102 141 aa-2.11□□□□□ -2.75
HTL1YCR020W-B YPL038W-AQ3E7B4 63 aa-2.11□□□□□ -2.75
HTL1YCR020W-B TY1B-LR3P0C2I6 1755 aaKnown RBP-2.12□□□□□ -2.75
HTL1YCR020W-B TY1B-PR3P0C2J1 1755 aaKnown RBP-2.12□□□□□ -2.75
HTL1YCR020W-B YJR107C-AP0CT86 78 aa-2.12□□□□□ -2.75
HTL1YCR020W-B SFT1P43682 97 aa-2.12□□□□□ -2.75
HTL1YCR020W-B PAU2P32612 120 aa-2.13□□□□□ -2.75
HTL1YCR020W-B AIM11P87275 137 aa-2.13□□□□□ -2.75
HTL1YCR020W-B PMD1P32634 1753 aa-2.13□□□□□ -2.75
HTL1YCR020W-B POP7P38291 140 aa-2.15□□□□□ -2.75
HTL1YCR020W-B COX12Q01519 83 aa-2.15□□□□□ -2.75
HTL1YCR020W-B SSN2P38931 1420 aa-2.17□□□□□ -2.76
HTL1YCR020W-B DAD1Q12248 94 aa-2.17□□□□□ -2.76
HTL1YCR020W-B YDR246W-AQ3E763 66 aa-2.17□□□□□ -2.76
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms