RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W SIP18P50263 79 aa2.94□□□□□ -1.94
CKS1YBR135W YGL193CP53097 103 aa2.94□□□□□ -1.94
CKS1YBR135W RCE1Q03530 315 aa2.94□□□□□ -1.94
CKS1YBR135W MRPS8Q03799 155 aa2.94□□□□□ -1.94
CKS1YBR135W UIP4Q08926 304 aa2.94□□□□□ -1.94
CKS1YBR135W YLR412C-AQ3E742 68 aa2.94□□□□□ -1.94
CKS1YBR135W BPH1P25356 2167 aa2.94□□□□□ -1.94
CKS1YBR135W YFL051CP43552 160 aa2.93□□□□□ -1.94
CKS1YBR135W YJL027CP47063 138 aaPredicted RBP2.93□□□□□ -1.94
CKS1YBR135W YAE1P47118 141 aaPredicted RBP2.93□□□□□ -1.94
CKS1YBR135W YDR102CQ03864 110 aa2.93□□□□□ -1.94
CKS1YBR135W KTI11Q3E840 82 aa2.93□□□□□ -1.94
CKS1YBR135W URA2P07259 2214 aaKnown RBP2.92□□□□□ -1.94
CKS1YBR135W VAR1P02381 398 aa2.92□□□□□ -1.94
CKS1YBR135W SPS2P08459 502 aa2.92□□□□□ -1.94
CKS1YBR135W PDX3P38075 228 aaKnown RBP2.92□□□□□ -1.94
CKS1YBR135W GVP36P40531 326 aaKnown RBP2.92□□□□□ -1.94
CKS1YBR135W YJL218WP40892 196 aaKnown RBP2.92□□□□□ -1.94
CKS1YBR135W YFL019CP43576 117 aa2.92□□□□□ -1.94
CKS1YBR135W BUD25P85052 153 aa2.92□□□□□ -1.94
CKS1YBR135W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
CKS1YBR135W Q0297Q9ZZV8 51 aa2.92□□□□□ -1.94
CKS1YBR135W YRA2P36036 203 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
CKS1YBR135W RIO2P40160 425 aaKnown RBP2.91□□□□□ -1.94
CKS1YBR135W YNL200CP40165 246 aaKnown RBP2.91□□□□□ -1.94
CKS1YBR135W YKR005CQ02203 525 aa2.91□□□□□ -1.94
CKS1YBR135W NAT3Q06504 195 aa2.91□□□□□ -1.94
CKS1YBR135W FIT3Q08907 204 aa2.91□□□□□ -1.94
CKS1YBR135W HUT1Q12520 339 aa2.91□□□□□ -1.94
CKS1YBR135W ANB1P19211 157 aa2.9□□□□□ -1.95
CKS1YBR135W SEC59P20048 519 aa2.9□□□□□ -1.95
CKS1YBR135W ATP15P21306 62 aa2.9□□□□□ -1.95
CKS1YBR135W AHT1P29589 182 aa2.9□□□□□ -1.95
CKS1YBR135W RPL14AP36105 138 aaKnown RBP2.9□□□□□ -1.95
CKS1YBR135W RPL14BP38754 138 aaKnown RBP2.9□□□□□ -1.95
CKS1YBR135W HTD2P38790 280 aaKnown RBP2.9□□□□□ -1.95
CKS1YBR135W YGL230CP53074 147 aa2.9□□□□□ -1.95
CKS1YBR135W HSP12P22943 109 aaKnown RBP2.89□□□□□ -1.95
CKS1YBR135W NRG2P38082 220 aa2.89□□□□□ -1.95
CKS1YBR135W ERV15P38312 142 aa2.89□□□□□ -1.95
CKS1YBR135W RPB11P38902 120 aa2.89□□□□□ -1.95
CKS1YBR135W VTC1P40046 129 aaRIP-Chip data2.89□□□□□ -1.95not detected
CKS1YBR135W YER134CP40081 178 aa2.89□□□□□ -1.95
CKS1YBR135W SED1Q01589 338 aa2.89□□□□□ -1.95
CKS1YBR135W ELP6Q04868 273 aa2.89□□□□□ -1.95
CKS1YBR135W YLR042CQ07990 161 aa2.89□□□□□ -1.95
CKS1YBR135W YGL041W-AP0C5N3 154 aa2.88□□□□□ -1.95
CKS1YBR135W FYV4P38783 130 aaPredicted RBP2.88□□□□□ -1.95
CKS1YBR135W RPL33BP41056 107 aaKnown RBP2.88□□□□□ -1.95
CKS1YBR135W EST3Q03096 181 aa2.88□□□□□ -1.95
CKS1YBR135W FYV12Q08559 129 aa2.88□□□□□ -1.95
CKS1YBR135W YBR090CP38253 122 aa2.87□□□□□ -1.95
CKS1YBR135W FLX1P40464 311 aa2.87□□□□□ -1.95
CKS1YBR135W SBH1P52870 82 aa2.87□□□□□ -1.95
CKS1YBR135W TVP18Q04767 167 aa2.87□□□□□ -1.95
CKS1YBR135W YAR023CD6VPM8 179 aa2.86□□□□□ -1.95
CKS1YBR135W CCW14O13547 238 aa2.86□□□□□ -1.95
CKS1YBR135W MRS4P23500 304 aa2.86□□□□□ -1.95
CKS1YBR135W YEA6P39953 335 aa2.86□□□□□ -1.95
CKS1YBR135W TIR3P40552 269 aa2.86□□□□□ -1.95
CKS1YBR135W YIR020CP40575 100 aa2.86□□□□□ -1.95
CKS1YBR135W PHS1P40857 217 aa2.86□□□□□ -1.95
CKS1YBR135W DOC1P53068 250 aa2.86□□□□□ -1.95
CKS1YBR135W GEP7P53171 287 aa2.86□□□□□ -1.95
CKS1YBR135W ELC1Q03071 99 aa2.86□□□□□ -1.95
CKS1YBR135W GAL83Q04739 417 aa2.86□□□□□ -1.95
CKS1YBR135W RAD6P06104 172 aa2.85□□□□□ -1.95
CKS1YBR135W SFT2P38166 215 aa2.85□□□□□ -1.95
CKS1YBR135W IPT1P38954 527 aa2.85□□□□□ -1.95
CKS1YBR135W NSA2P40078 261 aaKnown RBP2.85□□□□□ -1.95
CKS1YBR135W GAT4P40569 121 aa2.85□□□□□ -1.95
CKS1YBR135W DIE2P50076 525 aa2.85□□□□□ -1.95
CKS1YBR135W SAY1P53324 424 aa2.85□□□□□ -1.95
CKS1YBR135W YNR064CP53750 290 aa2.85□□□□□ -1.95
CKS1YBR135W YDR274CP87283 123 aa2.85□□□□□ -1.95
CKS1YBR135W CSI2Q08054 341 aa2.85□□□□□ -1.95
CKS1YBR135W YHR086W-AQ3E746 53 aa2.85□□□□□ -1.95
CKS1YBR135W ODC2Q99297 307 aa2.85□□□□□ -1.95
CKS1YBR135W COX5BP00425 151 aa2.84□□□□□ -1.95
CKS1YBR135W UBC5P15732 148 aa2.84□□□□□ -1.95
CKS1YBR135W UMP1P38293 148 aa2.84□□□□□ -1.95
CKS1YBR135W YHR022CP38763 256 aa2.84□□□□□ -1.95
CKS1YBR135W SVP26P38869 228 aa2.84□□□□□ -1.95
CKS1YBR135W ERG25P53045 309 aa2.84□□□□□ -1.95
CKS1YBR135W CYT2Q00873 224 aa2.84□□□□□ -1.95
CKS1YBR135W YPL067CQ02754 198 aa2.84□□□□□ -1.95
CKS1YBR135W UPS1Q05776 175 aa2.84□□□□□ -1.95
CKS1YBR135W ANT1Q06497 328 aa2.84□□□□□ -1.95
CKS1YBR135W SYM1Q06563 197 aa2.84□□□□□ -1.95
CKS1YBR135W YCL048W-AQ2V2Q2 79 aa2.84□□□□□ -1.95
CKS1YBR135W RPL39P04650 51 aa2.83□□□□□ -1.96
CKS1YBR135W DDR48P18899 430 aaKnown RBP2.83□□□□□ -1.96
CKS1YBR135W HYP2P23301 157 aaKnown RBP2.83□□□□□ -1.96
CKS1YBR135W ATP20Q12233 115 aa2.83□□□□□ -1.96
CKS1YBR135W POR1P04840 283 aaKnown RBP2.82□□□□□ -1.96
CKS1YBR135W YER135CP40082 130 aa2.82□□□□□ -1.96
CKS1YBR135W GNA1P43577 159 aaPredicted RBP2.82□□□□□ -1.96
CKS1YBR135W SPG1P50088 95 aa2.82□□□□□ -1.96
CKS1YBR135W RRT7Q07829 113 aa2.82□□□□□ -1.96
CKS1YBR135W PRE1P22141 198 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms