RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W MRPS8Q03799 155 aa5.09□□□□□ -1.59
SWD1YAR003W YMR244WQ04018 355 aa5.09□□□□□ -1.59
SWD1YAR003W TIM22Q12328 207 aa5.09□□□□□ -1.59
SWD1YAR003W ERG27Q12452 347 aaKnown RBP5.09□□□□□ -1.59
SWD1YAR003W YGR017WP53210 297 aa5.08□□□□□ -1.6
SWD1YAR003W SEN15Q04675 128 aa5.08□□□□□ -1.6
SWD1YAR003W GTO3Q04806 366 aa5.08□□□□□ -1.6
SWD1YAR003W WIP1Q2V2P8 89 aa5.08□□□□□ -1.6
SWD1YAR003W RPS22BQ3E7Y3 130 aaKnown RBP5.08□□□□□ -1.6
SWD1YAR003W RPL27AP0C2H6 136 aaKnown RBP5.07□□□□□ -1.6
SWD1YAR003W FUN14P18411 198 aa5.07□□□□□ -1.6
SWD1YAR003W MIG3P39943 394 aa5.07□□□□□ -1.6
SWD1YAR003W SPI1P40092 148 aa5.07□□□□□ -1.6
SWD1YAR003W UBC11P52492 156 aa5.07□□□□□ -1.6
SWD1YAR003W SDS23P53172 527 aa5.07□□□□□ -1.6
SWD1YAR003W MSC3Q05812 728 aa5.07□□□□□ -1.6
SWD1YAR003W TMA7Q3E764 64 aaKnown RBP5.07□□□□□ -1.6
SWD1YAR003W YPR014CQ6B0W2 109 aa5.07□□□□□ -1.6
SWD1YAR003W AIM29P36154 155 aa5.06□□□□□ -1.6
SWD1YAR003W YHR140WP38842 239 aa5.06□□□□□ -1.6
SWD1YAR003W CUE4Q04201 117 aaPredicted RBP5.06□□□□□ -1.6
SWD1YAR003W FYV7Q12247 151 aa5.06□□□□□ -1.6
SWD1YAR003W Q0255P03881 472 aa5.05□□□□□ -1.6
SWD1YAR003W POR1P04840 283 aaKnown RBP5.05□□□□□ -1.6
SWD1YAR003W RPL31AP0C2H8 113 aaKnown RBP5.05□□□□□ -1.6
SWD1YAR003W RPL2AP0CX45 254 aaKnown RBP5.05□□□□□ -1.6
SWD1YAR003W RPL2BP0CX46 254 aaKnown RBP5.05□□□□□ -1.6
SWD1YAR003W MDM10P18409 493 aa5.05□□□□□ -1.6
SWD1YAR003W CDC43P18898 376 aa5.05□□□□□ -1.6
SWD1YAR003W ZRT1P32804 376 aa5.05□□□□□ -1.6
SWD1YAR003W GPI19Q04082 140 aa5.05□□□□□ -1.6
SWD1YAR003W YLR281CQ05863 155 aa5.05□□□□□ -1.6
SWD1YAR003W YOL085CQ99345 113 aa5.05□□□□□ -1.6
SWD1YAR003W UTP20P35194 2493 aaKnown RBP5.04□□□□□ -1.6
SWD1YAR003W VAR1P02381 398 aa5.04□□□□□ -1.6
SWD1YAR003W RPL23AP0CX41 137 aaKnown RBP5.04□□□□□ -1.6
SWD1YAR003W RPL23BP0CX42 137 aaKnown RBP5.04□□□□□ -1.6
SWD1YAR003W RPS11AP0CX47 156 aaKnown RBP5.04□□□□□ -1.6
SWD1YAR003W RPS11BP0CX48 156 aaKnown RBP5.04□□□□□ -1.6
SWD1YAR003W AGA1P32323 725 aa5.04□□□□□ -1.6
SWD1YAR003W MRPL28P36527 147 aa5.04□□□□□ -1.6
SWD1YAR003W SEC72P39742 193 aaKnown RBP5.04□□□□□ -1.6
SWD1YAR003W YDR366CP87287 132 aa5.04□□□□□ -1.6
SWD1YAR003W CYT2Q00873 224 aa5.04□□□□□ -1.6
SWD1YAR003W ATG33Q06485 197 aa5.04□□□□□ -1.6
SWD1YAR003W YCR075W-AQ3E830 75 aa5.04□□□□□ -1.6
SWD1YAR003W COA6Q3E846 104 aa5.04□□□□□ -1.6
SWD1YAR003W ATP5P09457 212 aa5.03□□□□□ -1.6
SWD1YAR003W PRE1P22141 198 aaKnown RBP5.03□□□□□ -1.6
SWD1YAR003W GLC8P41818 229 aa5.03□□□□□ -1.6
SWD1YAR003W YGR149WP48236 432 aa5.03□□□□□ -1.6
SWD1YAR003W COX12Q01519 83 aa5.03□□□□□ -1.6
SWD1YAR003W SEC4P07560 215 aaKnown RBP5.02□□□□□ -1.61
SWD1YAR003W GSP1P32835 219 aaKnown RBP5.02□□□□□ -1.61
SWD1YAR003W GSP2P32836 220 aaKnown RBP5.02□□□□□ -1.61
SWD1YAR003W SAE3P89114 91 aa5.02□□□□□ -1.61
SWD1YAR003W VPS71Q03433 280 aa5.02□□□□□ -1.61
SWD1YAR003W TVP18Q04767 167 aa5.02□□□□□ -1.61
SWD1YAR003W ARC18Q05933 178 aaKnown RBP5.02□□□□□ -1.61
SWD1YAR003W YDL085C-AQ3E7B7 68 aaKnown RBP5.02□□□□□ -1.61
SWD1YAR003W YBR126W-AQ8TGU7 68 aa5.02□□□□□ -1.61
SWD1YAR003W YCH1P42937 148 aa5.01□□□□□ -1.61
SWD1YAR003W YGL118CP53132 145 aa5.01□□□□□ -1.61
SWD1YAR003W FSF1Q12029 327 aaKnown RBP5.01□□□□□ -1.61
SWD1YAR003W YBR200W-AQ3E755 54 aa5.01□□□□□ -1.61
SWD1YAR003W YCR024C-BQ3E7Z8 88 aa5.01□□□□□ -1.61
SWD1YAR003W YIL134C-AQ45U18 67 aa5.01□□□□□ -1.61
SWD1YAR003W RPL16BP26785 198 aaKnown RBP5□□□□□ -1.61
SWD1YAR003W DUO1P53168 247 aaKnown RBP5□□□□□ -1.61
SWD1YAR003W ADH2P00331 348 aaKnown RBP4.99□□□□□ -1.61
SWD1YAR003W BRP1P53194 125 aa4.99□□□□□ -1.61
SWD1YAR003W AIM34Q03673 198 aa4.99□□□□□ -1.61
SWD1YAR003W RPL42AP0CX27 106 aaKnown RBP4.98□□□□□ -1.61
SWD1YAR003W RPL42BP0CX28 106 aaKnown RBP4.98□□□□□ -1.61
SWD1YAR003W VHS2P40463 436 aa4.98□□□□□ -1.61
SWD1YAR003W HTL1Q9URQ5 78 aa4.98□□□□□ -1.61
SWD1YAR003W HAP3P13434 144 aa4.97□□□□□ -1.61
SWD1YAR003W KTI12P34253 313 aaKnown RBP4.97□□□□□ -1.61
SWD1YAR003W MRPL11P36521 249 aaPredicted RBP4.97□□□□□ -1.61
SWD1YAR003W TEM1P38987 245 aa4.97□□□□□ -1.61
SWD1YAR003W YFR035CP43608 114 aa4.97□□□□□ -1.61
SWD1YAR003W SGF11Q03067 99 aa4.97□□□□□ -1.61
SWD1YAR003W YCR001WP25347 104 aa4.96□□□□□ -1.62
SWD1YAR003W RRT13P40042 185 aa4.96□□□□□ -1.62
SWD1YAR003W OST3P48439 350 aa4.96□□□□□ -1.62
SWD1YAR003W YPS5P53057 165 aa4.96□□□□□ -1.62
SWD1YAR003W YLR042CQ07990 161 aa4.96□□□□□ -1.62
SWD1YAR003W DYN1P36022 4092 aa4.96□□□□□ -1.62
SWD1YAR003W YCR023CP25351 611 aa4.95□□□□□ -1.62
SWD1YAR003W YKR032WP36127 104 aa4.95□□□□□ -1.62
SWD1YAR003W YER076CP40049 302 aa4.95□□□□□ -1.62
SWD1YAR003W YER134CP40081 178 aa4.95□□□□□ -1.62
SWD1YAR003W ATP23P53722 227 aa4.95□□□□□ -1.62
SWD1YAR003W YPL257WQ08974 193 aa4.95□□□□□ -1.62
SWD1YAR003W SAL1D6W196 494 aa4.94□□□□□ -1.62
SWD1YAR003W NRG2P38082 220 aa4.94□□□□□ -1.62
SWD1YAR003W YNL217WP40152 326 aa4.94□□□□□ -1.62
SWD1YAR003W VAM10Q08474 114 aa4.94□□□□□ -1.62
SWD1YAR003W RPS8AP0CX39 200 aaKnown RBP4.93□□□□□ -1.62
SWD1YAR003W RPS8BP0CX40 200 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 61.6 ms