RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YJL213WP40896 331 aa3.26□□□□□ -1.89
PTA1YAL043C YPI1P43587 155 aa3.26□□□□□ -1.89
PTA1YAL043C ATP23P53722 227 aa3.26□□□□□ -1.89
PTA1YAL043C YIL014C-AQ02598 104 aa3.26□□□□□ -1.89
PTA1YAL043C CNL1Q06333 122 aa3.26□□□□□ -1.89
PTA1YAL043C TMC1Q08422 150 aaPredicted RBP3.26□□□□□ -1.89
PTA1YAL043C YER039C-AP0CD97 72 aa3.26□□□□□ -1.89
PTA1YAL043C TIR1P10863 254 aa3.26□□□□□ -1.89
PTA1YAL043C MRPL38P35996 138 aaPredicted RBP3.26□□□□□ -1.89
PTA1YAL043C RRT1P38192 103 aa3.26□□□□□ -1.89
PTA1YAL043C YIP1P53039 248 aa3.26□□□□□ -1.89
PTA1YAL043C MST27P53176 234 aa3.26□□□□□ -1.89
PTA1YAL043C YGR045CP53229 120 aa3.26□□□□□ -1.89
PTA1YAL043C ATP19P81451 68 aa3.26□□□□□ -1.89
PTA1YAL043C PBP4Q07362 185 aaKnown RBP3.26□□□□□ -1.89
PTA1YAL043C GEP3Q08622 556 aa3.26□□□□□ -1.89
PTA1YAL043C YOL085CQ99345 113 aa3.26□□□□□ -1.89
PTA1YAL043C YBR056W-AI2HB52 66 aa3.25□□□□□ -1.89
PTA1YAL043C YHR213WP0CI67 198 aa3.25□□□□□ -1.89
PTA1YAL043C MDM10P18409 493 aa3.25□□□□□ -1.89
PTA1YAL043C INO2P26798 304 aa3.25□□□□□ -1.89
PTA1YAL043C MST28P39552 234 aa3.25□□□□□ -1.89
PTA1YAL043C MRPL49P40858 161 aaPredicted RBP3.25□□□□□ -1.89
PTA1YAL043C ALG13P53178 202 aa3.25□□□□□ -1.89
PTA1YAL043C BRP1P53194 125 aa3.25□□□□□ -1.89
PTA1YAL043C GRH1Q04410 372 aaKnown RBP3.25□□□□□ -1.89
PTA1YAL043C PAU23Q07987 124 aa3.25□□□□□ -1.89
PTA1YAL043C PAU17Q12370 124 aa3.25□□□□□ -1.89
PTA1YAL043C DFM1Q12743 341 aaKnown RBP3.25□□□□□ -1.89
PTA1YAL043C ISD11Q6Q560 94 aa3.25□□□□□ -1.89
PTA1YAL043C TEL1P38110 2787 aa3.25□□□□□ -1.89
PTA1YAL043C MRP49P32388 137 aa3.25□□□□□ -1.89
PTA1YAL043C YHL044WP38727 235 aa3.25□□□□□ -1.89
PTA1YAL043C PAU7P39545 55 aa3.25□□□□□ -1.89
PTA1YAL043C MRX11Q03079 207 aa3.25□□□□□ -1.89
PTA1YAL043C GCN1P33892 2672 aaKnown RBP3.24□□□□□ -1.89
PTA1YAL043C YPR170W-BP0C5R9 85 aa3.24□□□□□ -1.89
PTA1YAL043C SGN1P40561 250 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
PTA1YAL043C LCB3P47013 409 aa3.24□□□□□ -1.89
PTA1YAL043C CAB4P53332 305 aa3.24□□□□□ -1.89
PTA1YAL043C YNL092WP53934 400 aa3.24□□□□□ -1.89
PTA1YAL043C VPS71Q03433 280 aa3.24□□□□□ -1.89
PTA1YAL043C GLE2P40066 365 aa3.24□□□□□ -1.89
PTA1YAL043C GLO1P50107 326 aa3.24□□□□□ -1.89
PTA1YAL043C SUR7P54003 302 aa3.24□□□□□ -1.89
PTA1YAL043C DGA1Q08650 418 aa3.24□□□□□ -1.89
PTA1YAL043C COX17Q12287 69 aa3.24□□□□□ -1.89
PTA1YAL043C MTR2P34232 184 aaKnown RBP3.23□□□□□ -1.89
PTA1YAL043C MID2P36027 376 aa3.23□□□□□ -1.89
PTA1YAL043C YHR130CP38834 111 aa3.23□□□□□ -1.89
PTA1YAL043C YNL198CP40166 100 aa3.23□□□□□ -1.89
PTA1YAL043C YLR363W-AQ3E747 85 aa3.23□□□□□ -1.89
PTA1YAL043C YKL102CP34249 101 aa3.23□□□□□ -1.89
PTA1YAL043C MIX17Q03667 156 aa3.23□□□□□ -1.89
PTA1YAL043C YOL160WQ08321 113 aa3.23□□□□□ -1.89
PTA1YAL043C HMRA2P0CY13 119 aa3.22□□□□□ -1.89
PTA1YAL043C FEN2P25621 512 aaKnown RBP3.22□□□□□ -1.89
PTA1YAL043C TOA2P32774 122 aa3.22□□□□□ -1.89
PTA1YAL043C APS1P35181 156 aa3.22□□□□□ -1.89
PTA1YAL043C IMP2P46972 177 aa3.22□□□□□ -1.89
PTA1YAL043C YMR103CQ04436 120 aa3.22□□□□□ -1.89
PTA1YAL043C MBF1O14467 151 aaKnown RBP3.22□□□□□ -1.89
PTA1YAL043C NCA3P46955 337 aa3.22□□□□□ -1.89
PTA1YAL043C YJL027CP47063 138 aaPredicted RBP3.22□□□□□ -1.89
PTA1YAL043C SCW10Q04951 389 aa3.22□□□□□ -1.89
PTA1YAL043C ADH1P00330 348 aaKnown RBP3.21□□□□□ -1.9
PTA1YAL043C YKR041WP36134 250 aa3.21□□□□□ -1.9
PTA1YAL043C UBC11P52492 156 aa3.21□□□□□ -1.9
PTA1YAL043C YGL088WP53151 121 aa3.21□□□□□ -1.9
PTA1YAL043C SPO24Q3E752 67 aa3.21□□□□□ -1.9
PTA1YAL043C YOR011W-AQ3E807 68 aa3.21□□□□□ -1.9
PTA1YAL043C IES6P32617 166 aa3.2□□□□□ -1.9
PTA1YAL043C GPI18P38211 433 aa3.2□□□□□ -1.9
PTA1YAL043C YHL037CP38733 133 aa3.2□□□□□ -1.9
PTA1YAL043C MMS2P53152 137 aa3.2□□□□□ -1.9
PTA1YAL043C BET5Q03630 159 aa3.2□□□□□ -1.9
PTA1YAL043C YMR320WQ04897 101 aa3.2□□□□□ -1.9
PTA1YAL043C PRM7Q12459 698 aa3.2□□□□□ -1.9
PTA1YAL043C YLR415CO13578 112 aa3.2□□□□□ -1.9
PTA1YAL043C YDL022C-AP0C5L6 82 aa3.2□□□□□ -1.9
PTA1YAL043C FPR2P32472 135 aa3.2□□□□□ -1.9
PTA1YAL043C YHR140WP38842 239 aa3.2□□□□□ -1.9
PTA1YAL043C YIL012WP40551 113 aa3.2□□□□□ -1.9
PTA1YAL043C CAX4P53223 239 aa3.2□□□□□ -1.9
PTA1YAL043C YNL046WP53956 172 aa3.2□□□□□ -1.9
PTA1YAL043C YPL261CQ08976 102 aa3.2□□□□□ -1.9
PTA1YAL043C HTL1Q9URQ5 78 aa3.2□□□□□ -1.9
PTA1YAL043C PAI3P01094 68 aa3.19□□□□□ -1.9
PTA1YAL043C YEL067CP39978 195 aa3.19□□□□□ -1.9
PTA1YAL043C YPL073CP40323 161 aa3.19□□□□□ -1.9
PTA1YAL043C MSA1Q08471 629 aa3.19□□□□□ -1.9
PTA1YAL043C AQY1P0CD91 305 aa3.19□□□□□ -1.9
PTA1YAL043C GPI19Q04082 140 aa3.19□□□□□ -1.9
PTA1YAL043C TIM22Q12328 207 aa3.19□□□□□ -1.9
PTA1YAL043C UBC5P15732 148 aa3.18□□□□□ -1.9
PTA1YAL043C HYP2P23301 157 aaKnown RBP3.18□□□□□ -1.9
PTA1YAL043C CMC1P36064 111 aa3.18□□□□□ -1.9
PTA1YAL043C YBR209WP38311 105 aa3.18□□□□□ -1.9
PTA1YAL043C SNF11P38956 169 aa3.18□□□□□ -1.9
PTA1YAL043C VTC1P40046 129 aaRIP-Chip data3.18□□□□□ -1.9not detected
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms