RNA–Protein interactions for RNA: Q0140

VAR1, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene VAR1, Length 1,197 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAR1Q0140 QCR2P07257 368 aa-3.08□□□□□ -2.9
VAR1Q0140 CYB5P40312 120 aa-3.08□□□□□ -2.9
VAR1Q0140 GIM5Q04493 163 aa-3.08□□□□□ -2.9
VAR1Q0140 YCR050CP25630 102 aa-3.09□□□□□ -2.9
VAR1Q0140 YNL198CP40166 100 aa-3.1□□□□□ -2.91
VAR1Q0140 YLR255CO13574 117 aa-3.13□□□□□ -2.91
VAR1Q0140 SHU1P38751 150 aa-3.13□□□□□ -2.91
VAR1Q0140 RPC19P28000 142 aaKnown RBP-3.15□□□□□ -2.91
VAR1Q0140 YIL086CP40503 102 aa-3.15□□□□□ -2.91
VAR1Q0140 YIL014C-AQ02598 104 aa-3.15□□□□□ -2.91
VAR1Q0140 PKR1Q03880 122 aaKnown RBP-3.15□□□□□ -2.91
VAR1Q0140 YDR366CP87287 132 aa-3.16□□□□□ -2.92
VAR1Q0140 TRM732Q03496 1420 aa-3.17□□□□□ -2.92
VAR1Q0140 DER1P38307 211 aa-3.17□□□□□ -2.92
VAR1Q0140 YJL197C-AP0C5P0 93 aa-3.18□□□□□ -2.92
VAR1Q0140 AME1P38313 324 aa-3.22□□□□□ -2.92
VAR1Q0140 RPS11AP0CX47 156 aaKnown RBP-3.24□□□□□ -2.93
VAR1Q0140 RPS11BP0CX48 156 aaKnown RBP-3.24□□□□□ -2.93
VAR1Q0140 ERV14P53173 138 aa-3.24□□□□□ -2.93
VAR1Q0140 GRX3Q03835 250 aa-3.24□□□□□ -2.93
VAR1Q0140 ARC19P33204 171 aaKnown RBP-3.25□□□□□ -2.93
VAR1Q0140 YMR320WQ04897 101 aa-3.25□□□□□ -2.93
VAR1Q0140 SPC3Q12133 184 aa-3.25□□□□□ -2.93
VAR1Q0140 SLO1Q3E784 85 aa-3.26□□□□□ -2.93
VAR1Q0140 GAT4P40569 121 aa-3.27□□□□□ -2.93
VAR1Q0140 ELC1Q03071 99 aa-3.27□□□□□ -2.93
VAR1Q0140 YGR164WP53291 111 aa-3.28□□□□□ -2.93
VAR1Q0140 YCL048W-AQ2V2Q2 79 aa-3.28□□□□□ -2.93
VAR1Q0140 SEC59P20048 519 aa-3.29□□□□□ -2.94
VAR1Q0140 RPL14AP36105 138 aaKnown RBP-3.31□□□□□ -2.94
VAR1Q0140 RPL14BP38754 138 aaKnown RBP-3.31□□□□□ -2.94
VAR1Q0140 YGR039WP53225 103 aa-3.31□□□□□ -2.94
VAR1Q0140 ATG38Q05789 226 aaKnown RBP-3.31□□□□□ -2.94
VAR1Q0140 COX19Q3E731 98 aa-3.31□□□□□ -2.94
VAR1Q0140 TOP2P06786 1428 aaKnown RBP-3.32□□□□□ -2.94
VAR1Q0140 PET54P10834 293 aa-3.32□□□□□ -2.94
VAR1Q0140 MPC1P53157 130 aaKnown RBP-3.32□□□□□ -2.94
VAR1Q0140 MPC2P38857 129 aa-3.33□□□□□ -2.94
VAR1Q0140 YLR363W-AQ3E747 85 aa-3.33□□□□□ -2.94
VAR1Q0140 DNA2P38859 1522 aa-3.34□□□□□ -2.94
VAR1Q0140 COX23P38824 151 aa-3.34□□□□□ -2.94
VAR1Q0140 CMC2Q3E7A4 109 aa-3.34□□□□□ -2.94
VAR1Q0140 YIL134C-AQ45U18 67 aa-3.34□□□□□ -2.94
VAR1Q0140 SEN1Q00416 2231 aaKnown RBP-3.35□□□□□ -2.95
VAR1Q0140 TVP18Q04767 167 aa-3.37□□□□□ -2.95
VAR1Q0140 CNL1Q06333 122 aa-3.37□□□□□ -2.95
VAR1Q0140 YCR108CQ3E819 63 aa-3.37□□□□□ -2.95
VAR1Q0140 YKL044WP36092 106 aa-3.38□□□□□ -2.95
VAR1Q0140 CYC2P38909 366 aa-3.4□□□□□ -2.95
VAR1Q0140 TY1B-BLQ12490 1755 aa-3.4□□□□□ -2.95
VAR1Q0140 HMRA2P0CY13 119 aa-3.41□□□□□ -2.96
VAR1Q0140 YGR042WP53227 271 aa-3.41□□□□□ -2.96
VAR1Q0140 PAU12P53343 120 aa-3.41□□□□□ -2.96
VAR1Q0140 GPI19Q04082 140 aa-3.41□□□□□ -2.96
VAR1Q0140 YRF1-2P40105 1681 aa-3.42□□□□□ -2.96
VAR1Q0140 RPC10P40422 70 aa-3.42□□□□□ -2.96
VAR1Q0140 RAD50P12753 1312 aa-3.43□□□□□ -2.96
VAR1Q0140 HYM1P32464 399 aa-3.43□□□□□ -2.96
VAR1Q0140 PAM16P42949 149 aa-3.44□□□□□ -2.96
VAR1Q0140 YOR097CQ12274 175 aaPredicted RBP-3.44□□□□□ -2.96
VAR1Q0140 PCC1Q3E833 88 aa-3.45□□□□□ -2.96
VAR1Q0140 OST5Q92316 86 aa-3.45□□□□□ -2.96
VAR1Q0140 YOR1P53049 1477 aa-3.47□□□□□ -2.96
VAR1Q0140 IMP2P46972 177 aa-3.48□□□□□ -2.97
VAR1Q0140 MOG1P47123 218 aa-3.49□□□□□ -2.97
VAR1Q0140 ACP1P32463 125 aa-3.5□□□□□ -2.97
VAR1Q0140 RPL22BP56628 122 aaKnown RBP-3.51□□□□□ -2.97
VAR1Q0140 RBL2P48606 106 aaKnown RBP-3.52□□□□□ -2.97
VAR1Q0140 YPL261CQ08976 102 aa-3.53□□□□□ -2.97
VAR1Q0140 TRS20P38334 175 aa-3.54□□□□□ -2.98
VAR1Q0140 YHR130CP38834 111 aa-3.56□□□□□ -2.98
VAR1Q0140 YIR020CP40575 100 aa-3.56□□□□□ -2.98
VAR1Q0140 SNF11P38956 169 aa-3.57□□□□□ -2.98
VAR1Q0140 FRQ1Q06389 190 aa-3.57□□□□□ -2.98
VAR1Q0140 TY1B-LR3P0C2I6 1755 aaKnown RBP-3.58□□□□□ -2.98
VAR1Q0140 TY1B-PR3P0C2J1 1755 aaKnown RBP-3.58□□□□□ -2.98
VAR1Q0140 YJR107C-AP0CT86 78 aa-3.58□□□□□ -2.98
VAR1Q0140 YCR101CP25607 182 aa-3.58□□□□□ -2.98
VAR1Q0140 SNN1P48232 102 aa-3.58□□□□□ -2.98
VAR1Q0140 YDR210WQ03482 75 aa-3.59□□□□□ -2.98
VAR1Q0140 PMD1P32634 1753 aa-3.6□□□□□ -2.99
VAR1Q0140 YOR376W-AQ3E805 51 aa-3.6□□□□□ -2.99
VAR1Q0140 CAT8P39113 1433 aa-3.61□□□□□ -2.99
VAR1Q0140 LSM6Q06406 86 aaKnown RBP-3.61□□□□□ -2.99
VAR1Q0140 PAU24P38155 120 aa-3.62□□□□□ -2.99
VAR1Q0140 YNL277W-AQ3E7Z0 62 aa-3.62□□□□□ -2.99
VAR1Q0140 YOL118CQ08259 102 aa-3.63□□□□□ -2.99
VAR1Q0140 YPL038W-AQ3E7B4 63 aa-3.63□□□□□ -2.99
VAR1Q0140 AIM11P87275 137 aa-3.68□□□□□ -3
VAR1Q0140 CSN9Q03981 162 aa-3.68□□□□□ -3
VAR1Q0140 YDR381C-AQ3E6R5 114 aa-3.69□□□□□ -3
VAR1Q0140 Q0144Q9ZZW2 109 aa-3.69□□□□□ -3
VAR1Q0140 MRPL38P35996 138 aaPredicted RBP-3.7□□□□□ -3
VAR1Q0140 PAU2P32612 120 aa-3.71□□□□□ -3
VAR1Q0140 YER187WP40102 141 aa-3.72□□□□□ -3
VAR1Q0140 YDR246W-AQ3E763 66 aa-3.72□□□□□ -3
VAR1Q0140 POP7P38291 140 aa-3.73□□□□□ -3.01
VAR1Q0140 COX12Q01519 83 aa-3.75□□□□□ -3.01
VAR1Q0140 SFT1P43682 97 aa-3.76□□□□□ -3.01
VAR1Q0140 DAD1Q12248 94 aa-3.76□□□□□ -3.01
Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms