RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 DCDC2BA2VCK2 349 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 SOBPA7XYQ1 873 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 TRDMT1O14717 391 aaKnown RBP11.95□□□□□ -0.5
TARDBP-221ENST00000619555 KIAA0391O15091 583 aaKnown RBP11.95□□□□□ -0.5
TARDBP-221ENST00000619555 EGFP01133 1207 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 TNNC2P02585 160 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 PDGFRBP09619 1106 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 CNR2P34972 360 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 ME1P48163 572 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 PXNP49023 591 aaPredicted RBP11.95□□□□□ -0.5
TARDBP-221ENST00000619555 GALK1P51570 392 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 PSMC1P62191 440 aaKnown RBP11.95□□□□□ -0.5
TARDBP-221ENST00000619555 ASIC1P78348 528 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 GRSF1Q12849 480 aaKnown RBP eCLIP11.95□□□□□ -0.51e-11■■□□□ 12.1
TARDBP-221ENST00000619555 MYO1EQ12965 1108 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 ZNF268Q14587 947 aaPredicted RBP11.95□□□□□ -0.5
TARDBP-221ENST00000619555 MTF1Q14872 753 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 DUOXA2Q1HG44 320 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 CFAP221Q4G0U5 840 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 RESP18Q5W5W9 173 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 STXBP4Q6ZWJ1 553 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 CEP68Q76N32 757 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 EPM2AIP1Q7L775 607 aaPredicted RBP11.95□□□□□ -0.5
TARDBP-221ENST00000619555 RDH13Q8NBN7 331 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 ZNF507Q8TCN5 953 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 MYLPFQ96A32 169 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 TRMT2BQ96GJ1 504 aaKnown RBP11.95□□□□□ -0.5
TARDBP-221ENST00000619555 SPATA32Q96LK8 384 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 SYT15Q9BQS2 421 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 LRRC27Q9C0I9 530 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 KIF9Q9HAQ2 790 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 CRTAC1Q9NQ79 661 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 GCNT4Q9P109 453 aa11.95□□□□□ -0.5
TARDBP-221ENST00000619555 UXTQ9UBK9 157 aaPredicted RBP11.95□□□□□ -0.5
TARDBP-221ENST00000619555 CDV3Q9UKY7 258 aaKnown RBP11.95□□□□□ -0.5
TARDBP-221ENST00000619555 CHD8Q9HCK8 2581 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 TRAV19A0A0A6YYK7 116 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 C2orf78A6NCI8 922 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 CLIC2O15247 247 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 TGFB1I1O43294 461 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 CST3P01034 146 aaPredicted RBP11.94□□□□□ -0.5
TARDBP-221ENST00000619555 CKMP06732 381 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 SDHBP21912 280 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 WARSP23381 471 aaKnown RBP11.94□□□□□ -0.5
TARDBP-221ENST00000619555 BDNFP23560 247 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 CASP1P29466 404 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 HOXA6P31267 233 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 GJA4P35212 333 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 MAGEA11P43364 429 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 FAM160A1Q05DH4 1040 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 PDGFRLQ15198 375 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 SURF1Q15526 300 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 ZNF77Q15935 545 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 DPH6Q7L8W6 267 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 TRAPPC11Q7Z392 1133 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.94□□□□□ -0.5
TARDBP-221ENST00000619555 WDR5BQ86VZ2 330 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 FAM160A2Q8N612 972 aaPredicted RBP11.94□□□□□ -0.5
TARDBP-221ENST00000619555 ARL14EPQ8N8R7 260 aaPredicted RBP11.94□□□□□ -0.5
TARDBP-221ENST00000619555 FUBP3Q96I24 572 aaKnown RBP eCLIP11.94□□□□□ -0.5
TARDBP-221ENST00000619555 MRPL45Q9BRJ2 306 aaKnown RBP11.94□□□□□ -0.5
TARDBP-221ENST00000619555 ECT2Q9H8V3 914 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 SEMA4GQ9NTN9 838 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 DUS2Q9NX74 493 aaKnown RBP11.94□□□□□ -0.5
TARDBP-221ENST00000619555 MAGEC2Q9UBF1 373 aaPredicted RBP11.94□□□□□ -0.5
TARDBP-221ENST00000619555 CDH9Q9ULB4 789 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 NME7Q9Y5B8 376 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 WNT6Q9Y6F9 365 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 PTPRDP23468 1912 aa11.94□□□□□ -0.5
TARDBP-221ENST00000619555 EIF3DO15371 548 aaKnown RBP eCLIP11.93□□□□□ -0.5
TARDBP-221ENST00000619555 RNF40O75150 1001 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 USP17L7P0C7H9 530 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 DLATP10515 647 aaKnown RBP11.93□□□□□ -0.5
TARDBP-221ENST00000619555 GRIK1P39086 918 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 CYP2J2P51589 502 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 USP46P62068 366 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 AMPD3Q01432 767 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 CSRP2Q16527 193 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 SNRNP35Q16560 246 aaKnown RBP11.93□□□□□ -0.5
TARDBP-221ENST00000619555 FAM26FQ5R3K3 315 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 C4orf50Q6ZRC1 276 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 WDR49Q8IV35 697 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 NELFCDQ8IXH7 590 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 IQUBQ8NA54 791 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 SH3RF2Q8TEC5 729 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 OSCP1Q8WVF1 389 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 SCFD1Q8WVM8 642 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 CCDC127Q96BQ5 260 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 MMS19Q96T76 1030 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 P2RY13Q9BPV8 354 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 C7orf25Q9BPX7 421 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 RTKNQ9BST9 563 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 BLZF1Q9H2G9 400 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 LINC00597Q9H2U6 94 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 CUEDC2Q9H467 287 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 KIAA1586Q9HCI6 787 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 AGPAT3Q9NRZ7 376 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 CIZ1Q9ULV3 898 aaPredicted RBP11.93□□□□□ -0.5
TARDBP-221ENST00000619555 SLC8A2Q9UPR5 921 aa11.93□□□□□ -0.5
TARDBP-221ENST00000619555 ATP6V1DQ9Y5K8 247 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms