RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ANK1P16157 1881 aa18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 KIF26AQ9ULI4 1882 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 HUS1O60921 280 aa18.8■□□□□ 0.6
SHKBP1-203ENST00000594298 TADA3O75528 432 aa18.8■□□□□ 0.6
SHKBP1-203ENST00000594298 MYL7Q01449 175 aa18.8■□□□□ 0.6
SHKBP1-203ENST00000594298 EHHADHQ08426 723 aa18.8■□□□□ 0.6
SHKBP1-203ENST00000594298 CFAP221Q4G0U5 840 aa18.8■□□□□ 0.6
SHKBP1-203ENST00000594298 CC2D1AQ6P1N0 951 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-203ENST00000594298 EPM2AIP1Q7L775 607 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-203ENST00000594298 ZSWIM2Q8NEG5 633 aa18.8■□□□□ 0.6
SHKBP1-203ENST00000594298 HPS3Q969F9 1004 aa18.8■□□□□ 0.6
SHKBP1-203ENST00000594298 SAAL1Q96ER3 474 aa18.8■□□□□ 0.6
SHKBP1-203ENST00000594298 FGFBP2Q9BYJ0 223 aa18.8■□□□□ 0.6
SHKBP1-203ENST00000594298 HOOK1Q9UJC3 728 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-203ENST00000594298 MAGED2Q9UNF1 606 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-203ENST00000594298 GABRDO14764 452 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 AKAP3O75969 853 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 KIF20AO95235 890 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 ARSAP15289 507 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 DRD1P21728 446 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 CYP2F1P24903 491 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 FAM160A1Q05DH4 1040 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 DDR2Q16832 855 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 KMT5BQ4FZB7 885 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 FBXO43Q4G163 708 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 SDHAF4Q5VUM1 108 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 HS2ST1Q7LGA3 356 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 CACNA2D4Q7Z3S7 1137 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 CAMKK1Q8N5S9 505 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 CSGALNACT2Q8N6G5 542 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 TOP6BLQ8N6T0 577 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 FUBP3Q96I24 572 aaKnown RBP eCLIP18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 SLC39A2Q9NP94 309 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 CGNQ9P2M7 1197 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 SLC8A2Q9UPR5 921 aa18.79■□□□□ 0.6
SHKBP1-203ENST00000594298 KLRC4O43908 158 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 GDF9O60383 454 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 RPP40O75818 363 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 EGFP01133 1207 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 RPN1P04843 607 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 ACAT1P24752 427 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 RAP1GAPP47736 663 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 LHX1P48742 406 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 LIMK1P53667 647 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 RBP5P82980 135 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 MTF1Q14872 753 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 PPM1JQ5JR12 505 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 SCARA3Q6AZY7 606 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 FMR1NBQ8N0W7 255 aaPredicted RBP18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 STKLD1Q8NE28 680 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 DDX1Q92499 740 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 EXOC4Q96A65 974 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 TIGD1Q96MW7 591 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 CBWD1Q9BRT8 395 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 KIAA1586Q9HCI6 787 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 SIX4Q9UIU6 781 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 GTF3C4Q9UKN8 822 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 SNX9Q9Y5X1 595 aa18.78■□□□□ 0.6
SHKBP1-203ENST00000594298 RNF40O75150 1001 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 EPN2O95208 641 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 PCSK1P29120 753 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 GJA4P35212 333 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 GALK1P51570 392 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 DPYDQ12882 1025 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 ZNF77Q15935 545 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 BMT2Q1RMZ1 405 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 FAM171BQ6P995 826 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 DPH6Q7L8W6 267 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 LIMS2Q7Z4I7 341 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 OSTM1Q86WC4 334 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 ADGRF2Q8IZF7 708 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 CPA6Q8N4T0 437 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 GLIS3Q8NEA6 775 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 GOLGA5Q8TBA6 731 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 OSCP1Q8WVF1 389 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 SCFD1Q8WVM8 642 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 P2RY13Q9BPV8 354 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 ECT2Q9H8V3 914 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 FBRSL1Q9HCM7 1045 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 PDE11AQ9HCR9 933 aa18.77■□□□□ 0.6
SHKBP1-203ENST00000594298 TRAV19A0A0A6YYK7 116 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 AXIN1O15169 862 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 KRT19P08727 400 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 USP17L7P0C7H9 530 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 ZNF806P0C7X5 589 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 TCF3P15923 654 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 MAGEA11P43364 429 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 PXNP49023 591 aaPredicted RBP18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 USP4Q13107 963 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 KNOP1Q1ED39 458 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 SOWAHAQ2M3V2 549 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 SPATA2LQ8IUW3 424 aaPredicted RBP18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 NELFCDQ8IXH7 590 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 GPD1LQ8N335 351 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 ENGASEQ8NFI3 743 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 ATP2A3Q93084 1043 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 ZC3H10Q96K80 434 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 CEP295NLQ96MC4 621 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 MTMR12Q9C0I1 747 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 PCIF1Q9H4Z3 704 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms