RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 MYO6Q9UM54 1294 aa20.77■□□□□ 0.92
CIRBP-220ENST00000588917 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.77■□□□□ 0.92
CIRBP-220ENST00000588917 VNN2O95498 520 aa20.76■□□□□ 0.91
CIRBP-220ENST00000588917 ANXA13P27216 316 aa20.76■□□□□ 0.91
CIRBP-220ENST00000588917 PBX1P40424 430 aa20.76■□□□□ 0.91
CIRBP-220ENST00000588917 RBM10P98175 930 aaKnown RBP20.76■□□□□ 0.91
CIRBP-220ENST00000588917 CNGA2Q16280 664 aa20.76■□□□□ 0.91
CIRBP-220ENST00000588917 PUS10Q3MIT2 529 aaKnown RBP20.76■□□□□ 0.91
CIRBP-220ENST00000588917 TMEM31Q5JXX7 168 aa20.76■□□□□ 0.91
CIRBP-220ENST00000588917 ATAT1Q5SQI0 421 aa20.76■□□□□ 0.91
CIRBP-220ENST00000588917 FUKQ8N0W3 1084 aa20.76■□□□□ 0.91
CIRBP-220ENST00000588917 ZNF397Q8NF99 534 aaPredicted RBP20.76■□□□□ 0.91
CIRBP-220ENST00000588917 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.76■□□□□ 0.91
CIRBP-220ENST00000588917 MSLNLQ96KJ4 702 aa20.76■□□□□ 0.91
CIRBP-220ENST00000588917 C8orf48Q96LL4 319 aa20.76■□□□□ 0.91
CIRBP-220ENST00000588917 LRFN3Q9BTN0 628 aa20.76■□□□□ 0.91
CIRBP-220ENST00000588917 ADAM7Q9H2U9 754 aa20.76■□□□□ 0.91
CIRBP-220ENST00000588917 PIDD1Q9HB75 910 aa20.76■□□□□ 0.91
CIRBP-220ENST00000588917 NLRC4Q9NPP4 1024 aa20.76■□□□□ 0.91
CIRBP-220ENST00000588917 HESX1Q9UBX0 185 aa20.76■□□□□ 0.91
CIRBP-220ENST00000588917 CD207Q9UJ71 328 aa20.76■□□□□ 0.91
CIRBP-220ENST00000588917 TBX10O75333 385 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 FAM200BP0CF97 657 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 PTPN2P17706 415 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 PLA2G5P39877 138 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 DLX2Q07687 328 aaPredicted RBP20.75■□□□□ 0.91
CIRBP-220ENST00000588917 TWF1Q12792 350 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 TAF12Q16514 161 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 PPP1R26Q5T8A7 1209 aaPredicted RBP20.75■□□□□ 0.91
CIRBP-220ENST00000588917 SYCE2Q6PIF2 218 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 GPR149Q86SP6 731 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 ANKRD52Q8NB46 1076 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 FAM122AQ96E09 287 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 RIPOR3Q96MK2 946 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 LPIN3Q9BQK8 851 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 NUCKS1Q9H1E3 243 aaKnown RBP20.75■□□□□ 0.91
CIRBP-220ENST00000588917 CRISPLD1Q9H336 500 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 CD320Q9NPF0 282 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 FAM49BQ9NUQ9 324 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 FAM50BQ9Y247 325 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 YIPF1Q9Y548 306 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 ITIH6Q6UXX5 1313 aa20.75■□□□□ 0.91
CIRBP-220ENST00000588917 F8VZ95 297 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 CYP26A1O43174 497 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 RFPL2O75678 378 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 CCDC130P13994 396 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 GNA15P30679 374 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 SOX5P35711 763 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 MTHFRP42898 656 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 JAM2P57087 298 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 RARS2Q5T160 578 aaKnown RBP20.74■□□□□ 0.91
CIRBP-220ENST00000588917 SPECC1LQ69YQ0 1117 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 PTCRAQ6ISU1 281 aaPredicted RBP20.74■□□□□ 0.91
CIRBP-220ENST00000588917 LCLAT1Q6UWP7 414 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 TMC5Q6UXY8 1006 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 PAQR9Q6ZVX9 377 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 FAM35AQ86V20 835 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 SCN4BQ8IWT1 228 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 C12orf76Q8N812 135 aaPredicted RBP20.74■□□□□ 0.91
CIRBP-220ENST00000588917 LEMD2Q8NC56 503 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 KHSRPQ92945 711 aaKnown RBP eCLIP20.74■□□□□ 0.91
CIRBP-220ENST00000588917 SPATA17Q96L03 361 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 DUSP16Q9BY84 665 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 UBXN6Q9BZV1 441 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 ZNF518BQ9C0D4 1074 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 S1PR5Q9H228 398 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 CSNK1G1Q9HCP0 422 aa20.74■□□□□ 0.91
CIRBP-220ENST00000588917 DMAP1Q9NPF5 467 aaPredicted RBP20.74■□□□□ 0.91
CIRBP-220ENST00000588917 ATG2AQ2TAZ0 1938 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 A0A1W2PQJ5 194 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 PI4K2BG5E9Z4 385 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 CLDN5O00501 218 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 EPHB6O15197 1021 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 GPR37L1O60883 481 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 AP1G2O75843 785 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 TPM1P09493 284 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 CSH1P0DML2 217 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 CSH2P0DML3 217 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 ADORA2BP29275 332 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 CLCN1P35523 988 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 TRIM14Q14142 442 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 MEA1Q16626 185 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 GJD3Q8N144 294 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 ZNF606Q8WXB4 792 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 SMG7Q92540 1137 aaKnown RBP20.73■□□□□ 0.91
CIRBP-220ENST00000588917 NECTIN4Q96NY8 510 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 GPR88Q9GZN0 384 aa20.73■□□□□ 0.91
CIRBP-220ENST00000588917 AJAP1Q9UKB5 411 aaPredicted RBP20.73■□□□□ 0.91
CIRBP-220ENST00000588917 GRXCR2A6NFK2 248 aa20.72■□□□□ 0.91
CIRBP-220ENST00000588917 O00370 1275 aa20.72■□□□□ 0.91
CIRBP-220ENST00000588917 CCL16O15467 120 aa20.72■□□□□ 0.91
CIRBP-220ENST00000588917 FGF19O95750 216 aa20.72■□□□□ 0.91
CIRBP-220ENST00000588917 KRT9P35527 623 aa20.72■□□□□ 0.91
CIRBP-220ENST00000588917 DDR2Q16832 855 aa20.72■□□□□ 0.91
CIRBP-220ENST00000588917 CCDC142Q17RM4 750 aa20.72■□□□□ 0.91
CIRBP-220ENST00000588917 SMRP1Q8NCR6 262 aa20.72■□□□□ 0.91
CIRBP-220ENST00000588917 PSMG2Q969U7 264 aa20.72■□□□□ 0.91
CIRBP-220ENST00000588917 ZNF707Q96C28 371 aaPredicted RBP20.72■□□□□ 0.91
CIRBP-220ENST00000588917 PNPLA8Q9NP80 782 aa20.72■□□□□ 0.91
CIRBP-220ENST00000588917 COMMD8Q9NX08 183 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms