RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.93□□□□□ -1.46
LINC01538-201ENST00000588074 ANGPTL6Q8NI99 470 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 DNAJC9Q8WXX5 260 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 TRIM63Q969Q1 353 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 IFT74Q96LB3 600 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 CCDC74BQ96LY2 380 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 ZDHHC15Q96MV8 337 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 AP1M1Q9BXS5 423 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 CRNKL1Q9BZJ0 848 aaKnown RBP5.93□□□□□ -1.46
LINC01538-201ENST00000588074 KRT23Q9C075 422 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 SMG9Q9H0W8 520 aaKnown RBP5.93□□□□□ -1.46
LINC01538-201ENST00000588074 PSTPIP2Q9H939 334 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 UBN1Q9NPG3 1134 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 FANCFQ9NPI8 374 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 C8orf4Q9NR00 106 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 MINPP1Q9UNW1 487 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 JAG2Q9Y219 1238 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 PCDHB6Q9Y5E3 794 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 MROH7Q68CQ1 1323 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 PCF11O94913 1555 aaKnown RBP5.93□□□□□ -1.46
LINC01538-201ENST00000588074 NPHP4O75161 1426 aaPredicted RBP5.93□□□□□ -1.46
LINC01538-201ENST00000588074 PIK3C2GO75747 1445 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 ADGRL3Q9HAR2 1447 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 FANCAO15360 1455 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 GOLGA8IPA6NC78 632 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 SYNDIG1LA6NDD5 238 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 CASQ2O14958 399 aaPredicted RBP5.93□□□□□ -1.46
LINC01538-201ENST00000588074 RNF113AO15541 343 aaKnown RBP5.93□□□□□ -1.46
LINC01538-201ENST00000588074 HSF2BPO75031 334 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 TJP3O95049 919 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 CRYZL1O95825 349 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 PAEPP09466 180 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 VAV1P15498 845 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 KCNA3P22001 575 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 PHBP35232 272 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 KRT6CP48668 564 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 NR2C2P49116 596 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 MAPK10P53779 464 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 KLHL30Q0D2K2 578 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 DNAJC3Q13217 504 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 R3HDM1Q15032 1099 aaKnown RBP5.93□□□□□ -1.46
LINC01538-201ENST00000588074 KRT71Q3SY84 523 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 ANKRD39Q53RE8 183 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 FAM133BQ5BKY9 247 aaKnown RBP5.93□□□□□ -1.46
LINC01538-201ENST00000588074 DENND2CQ68D51 928 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 GDF6Q6KF10 455 aaPredicted RBP5.93□□□□□ -1.46
LINC01538-201ENST00000588074 DARS2Q6PI48 645 aaKnown RBP5.93□□□□□ -1.46
LINC01538-201ENST00000588074 GALNT7Q86SF2 657 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 FAM35AQ86V20 835 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 DHX40Q8IX18 779 aaKnown RBP5.93□□□□□ -1.46
LINC01538-201ENST00000588074 ZBED8Q8IZ13 594 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 C7orf61Q8IZ16 206 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 ANKS4BQ8N8V4 417 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 PLEKHO2Q8TD55 490 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 NAT14Q8WUY8 206 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 RSAD2Q8WXG1 361 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 ASB12Q8WXK4 309 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 HERVK_113Q902F9 699 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 MVB12AQ96EY5 273 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 CEP19Q96LK0 163 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 API5Q9BZZ5 524 aaKnown RBP5.93□□□□□ -1.46
LINC01538-201ENST00000588074 SNX25Q9H3E2 840 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 C12orf4Q9NQ89 552 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 VANGL2Q9ULK5 521 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 ZMYND8Q9ULU4 1186 aaPredicted RBP5.93□□□□□ -1.46
LINC01538-201ENST00000588074 DNAJC16Q9Y2G8 782 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 DYRK1BQ9Y463 629 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 SLC4A4Q9Y6R1 1079 aa5.93□□□□□ -1.46
LINC01538-201ENST00000588074 A0A0G2JS52 829 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 CTAGE9A4FU28 777 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 LRRC72A6NJI9 287 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 OR5K4A6NMS3 321 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 FADS2P1A8MWK0 482 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 CENPBD1B2RD01 187 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 DDX3XO00571 662 aaKnown RBP eCLIP5.92□□□□□ -1.46
LINC01538-201ENST00000588074 EXTL3O43909 919 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 STX10O60499 249 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 PABPC4LP0CB38 370 aaKnown RBP5.92□□□□□ -1.46
LINC01538-201ENST00000588074 PCNAP12004 261 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 CKMT1AP12532 417 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 NR1D1P20393 614 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 PDCP20941 246 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 TBXAS1P24557 533 aaPredicted RBP5.92□□□□□ -1.46
LINC01538-201ENST00000588074 HOXC12P31275 282 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 ARFIP2P53365 341 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 BPIFB3P59826 476 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 OLR1P78380 273 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 OCRLQ01968 901 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 GUCY2DQ02846 1103 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 CDK18Q07002 472 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 POU4F3Q15319 338 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 CYTH1Q15438 398 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 UAP1L1Q3KQV9 507 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 TTMPQ5BVD1 217 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 DGKKQ5KSL6 1271 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 ARMC4Q5T2S8 1044 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 NBPF12Q5TAG4 269 aaPredicted RBP5.92□□□□□ -1.46
LINC01538-201ENST00000588074 SLC30A10Q6XR72 485 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 RFPL4BQ6ZWI9 263 aa5.92□□□□□ -1.46
LINC01538-201ENST00000588074 SPATA24Q86W54 205 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms