RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 KRT82Q9NSB4 513 aa16.85■□□□□ 0.29
CSNK1D-212ENST00000580061 HESX1Q9UBX0 185 aa16.85■□□□□ 0.29
CSNK1D-212ENST00000580061 FBXW11Q9UKB1 542 aa16.85■□□□□ 0.29
CSNK1D-212ENST00000580061 GREB1Q4ZG55 1949 aa16.85■□□□□ 0.29
CSNK1D-212ENST00000580061 ATP8B3O60423 1300 aa16.85■□□□□ 0.29
CSNK1D-212ENST00000580061 AP1G2O75843 785 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 SEC24AO95486 1093 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 PLEKP08567 350 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 FAM200BP0CF97 657 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 HAPLN1P10915 354 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 FECHP22830 423 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 MAGEA11P43364 429 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 NRIP1P48552 1158 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 CACNA2D1P54289 1103 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 BCAT1P54687 386 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 CDK17Q00537 523 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 DENND1BQ6P3S1 775 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 VSTM1Q6UX27 236 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 OLIG1Q8TAK6 271 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 UBA3Q8TBC4 463 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 PPP2R3CQ969Q6 453 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 CDCA3Q99618 268 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 CHP1Q99653 195 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 LHX5Q9H2C1 402 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 CYP4F11Q9HBI6 524 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 CSNK1G1Q9HCP0 422 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 TMEM30AQ9NV96 361 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 SLC27A5Q9Y2P5 690 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 MTCH2Q9Y6C9 303 aa16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 PRRC2BQ5JSZ5 2229 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-212ENST00000580061 REV3LO60673 3130 aa16.83■□□□□ 0.29
CSNK1D-212ENST00000580061 M0QYV0 167 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 BEST1O76090 585 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 SPATA31D3P0C874 917 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 NPR3P17342 541 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 ELF1P32519 619 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 TUFMP49411 452 aaKnown RBP16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 PDE4CQ08493 712 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 CCDC173Q0VFZ6 552 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 MAPK8IP2Q13387 824 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 MGAT5BQ3V5L5 792 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 TCEAL5Q5H9L2 206 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 CLEC20AQ6ZU45 233 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 SPATA31D4Q6ZUB0 917 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 PASD1Q8IV76 773 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 TCEAL8Q8IYN2 117 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 KREMEN2Q8NCW0 462 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 ZMIZ2Q8NF64 920 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 PPP1R9BQ96SB3 815 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 SMOQ99835 787 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 PDCL3Q9H2J4 239 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 HCFC2Q9Y5Z7 792 aa16.83■□□□□ 0.28
CSNK1D-212ENST00000580061 SSU72P8A0A1W2PR75 194 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 PRRG1O14668 218 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 SETSIPP0DME0 302 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 EPCAMP16422 314 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 TNFAIP3P21580 790 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 CDH5P33151 784 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 GRIK1P39086 918 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 GPD2P43304 727 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 MAP3K7CLP57077 242 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 BST2Q10589 180 aaKnown RBP16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 HYAL1Q12794 435 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 KCNC3Q14003 757 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 TRIM72Q6ZMU5 477 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 Q7L0L9 218 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 SCN4BQ8IWT1 228 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 WDTC1Q8N5D0 677 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 HDAC7Q8WUI4 952 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 SLC35F5Q8WV83 523 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 SECISBP2LQ93073 1101 aaKnown RBP16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 C8orf48Q96LL4 319 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 KCNK16Q96T55 309 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 PCDHB18PQ96TA0 734 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 GAS2L1Q99501 681 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 SEPT5Q99719 369 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 PLEKHA4Q9H4M7 779 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 DMAP1Q9NPF5 467 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 YIPF1Q9Y548 306 aa16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 ZNF638Q14966 1978 aaKnown RBP16.82■□□□□ 0.28
CSNK1D-212ENST00000580061 F8VP50 259 aa16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 TULP2O00295 520 aa16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 DDX3XO00571 662 aaKnown RBP eCLIP16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 XPO1O14980 1071 aaKnown RBP16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 TRIM66O15016 1216 aa16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 SOAT2O75908 522 aa16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 LSM8O95777 96 aaKnown RBP16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 CYP1A1P04798 512 aaPredicted RBP16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 C8AP07357 584 aa16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 IGFBP4P22692 258 aa16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 GTF2F1P35269 517 aaKnown RBP eCLIP16.81■□□□□ 0.282e-7■■■■□ 24.8
CSNK1D-212ENST00000580061 EIF4A3P38919 411 aaKnown RBP16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 GPR15P49685 360 aa16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 SLC8A3P57103 927 aa16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 RPL10AP62906 217 aaKnown RBP16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 NOMO3P69849 1222 aa16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 DDR2Q16832 855 aa16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 ASTE1Q2TB18 679 aaPredicted RBP16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 LIN9Q5TKA1 542 aa16.81■□□□□ 0.28
CSNK1D-212ENST00000580061 CCDC149Q6ZUS6 474 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms