RNA–Protein interactions for RNA: ENST00000544691.6

SDR39U1-203, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best)

Gene SDR39U1, Length 1,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-203ENST00000544691 CBX8Q9HC52 389 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 SIX2Q9NPC8 291 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 UBE2TQ9NPD8 197 aaPredicted RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 KRT82Q9NSB4 513 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 MRPS23Q9Y3D9 190 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 NR2E1Q9Y466 385 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 ASB3Q9Y575 518 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 DOCK8Q8NF50 2099 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 HMGA1P17096 107 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 CEBPBP17676 345 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 CDK11BP21127 795 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 ADORA2BP29275 332 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 GBP2P32456 591 aaPredicted RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 COPB1P53618 953 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 YWHAEP62258 255 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 CYP4A22Q5TCH4 519 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 TMEM270Q6UE05 265 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 OTOP3Q7RTS5 596 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 ITIH5Q86UX2 942 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 LUZP1Q86V48 1076 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 FGF13Q92913 245 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 CYFIP2Q96F07 1278 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 HEXIM2Q96MH2 286 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 KCNK16Q96T55 309 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 AVENQ9NQS1 362 aaPredicted RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 APEX2Q9UBZ4 518 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 LIMA1Q9UHB6 759 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 MAGED2Q9UNF1 606 aaPredicted RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 PCDHB4Q9Y5E5 795 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 BDP1A6H8Y1 2624 aa20.52■□□□□ 0.88
SDR39U1-203ENST00000544691 SMTNL1A8MU46 457 aa20.52■□□□□ 0.87
SDR39U1-203ENST00000544691 BECN2A8MW95 431 aa20.52■□□□□ 0.87
SDR39U1-203ENST00000544691 RNF225M0QZC1 329 aaPredicted RBP20.52■□□□□ 0.87
SDR39U1-203ENST00000544691 MOSPD3O75425 235 aa20.52■□□□□ 0.87
SDR39U1-203ENST00000544691 BEST1O76090 585 aa20.52■□□□□ 0.87
SDR39U1-203ENST00000544691 PPP1R26Q5T8A7 1209 aaPredicted RBP20.52■□□□□ 0.87
SDR39U1-203ENST00000544691 DPY19L2P1Q6NXN4 242 aa20.52■□□□□ 0.87
SDR39U1-203ENST00000544691 GAREM2Q75VX8 874 aa20.52■□□□□ 0.87
SDR39U1-203ENST00000544691 SMARCD1Q96GM5 515 aa20.52■□□□□ 0.87
SDR39U1-203ENST00000544691 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.52■□□□□ 0.87
SDR39U1-203ENST00000544691 AJAP1Q9UKB5 411 aaPredicted RBP20.52■□□□□ 0.87
SDR39U1-203ENST00000544691 A0A1W2PRU2 124 aa20.51■□□□□ 0.87
SDR39U1-203ENST00000544691 SLC38A8A6NNN8 435 aa20.51■□□□□ 0.87
SDR39U1-203ENST00000544691 TRIM66O15016 1216 aa20.51■□□□□ 0.87
SDR39U1-203ENST00000544691 AP1G2O75843 785 aa20.51■□□□□ 0.87
SDR39U1-203ENST00000544691 TAF12Q16514 161 aa20.51■□□□□ 0.87
SDR39U1-203ENST00000544691 NPAS3Q8IXF0 933 aa20.51■□□□□ 0.87
SDR39U1-203ENST00000544691 ST13P5Q8NFI4 369 aaPredicted RBP20.51■□□□□ 0.87
SDR39U1-203ENST00000544691 SHKBP1Q8TBC3 707 aa20.51■□□□□ 0.87
SDR39U1-203ENST00000544691 ACSF2Q96CM8 615 aaPredicted RBP20.51■□□□□ 0.87
SDR39U1-203ENST00000544691 HNRNPABQ99729 332 aaKnown RBP20.51■□□□□ 0.87
SDR39U1-203ENST00000544691 IL21Q9HBE4 155 aa20.51■□□□□ 0.87
SDR39U1-203ENST00000544691 LRRC10BA6NIK2 292 aa20.5■□□□□ 0.87
SDR39U1-203ENST00000544691 CALCAP01258 141 aa20.5■□□□□ 0.87
SDR39U1-203ENST00000544691 CSH1P0DML2 217 aa20.5■□□□□ 0.87
SDR39U1-203ENST00000544691 CSH2P0DML3 217 aa20.5■□□□□ 0.87
SDR39U1-203ENST00000544691 TRIM21P19474 475 aaKnown RBP20.5■□□□□ 0.87
SDR39U1-203ENST00000544691 GABRR2P28476 465 aa20.5■□□□□ 0.87
SDR39U1-203ENST00000544691 USP46P62068 366 aa20.5■□□□□ 0.87
SDR39U1-203ENST00000544691 LEMD2Q8NC56 503 aa20.5■□□□□ 0.87
SDR39U1-203ENST00000544691 ZMIZ2Q8NF64 920 aa20.5■□□□□ 0.87
SDR39U1-203ENST00000544691 ANKRD20A12PQ8NF67 263 aa20.5■□□□□ 0.87
SDR39U1-203ENST00000544691 C8orf48Q96LL4 319 aa20.5■□□□□ 0.87
SDR39U1-203ENST00000544691 SMOQ99835 787 aa20.5■□□□□ 0.87
SDR39U1-203ENST00000544691 DMAP1Q9NPF5 467 aaPredicted RBP20.5■□□□□ 0.87
SDR39U1-203ENST00000544691 CDH7Q9ULB5 785 aa20.5■□□□□ 0.87
SDR39U1-203ENST00000544691 ATP8B3O60423 1300 aa20.5■□□□□ 0.87
SDR39U1-203ENST00000544691 ZNF197O14709 1029 aa20.49■□□□□ 0.87
SDR39U1-203ENST00000544691 TPM2P07951 284 aa20.49■□□□□ 0.87
SDR39U1-203ENST00000544691 LAMP2P13473 410 aa20.49■□□□□ 0.87
SDR39U1-203ENST00000544691 ANXA13P27216 316 aa20.49■□□□□ 0.87
SDR39U1-203ENST00000544691 KLK7P49862 253 aa20.49■□□□□ 0.87
SDR39U1-203ENST00000544691 TEAD2Q15562 447 aa20.49■□□□□ 0.87
SDR39U1-203ENST00000544691 ARHGAP44Q17R89 818 aa20.49■□□□□ 0.87
SDR39U1-203ENST00000544691 STXBP5Q5T5C0 1151 aa20.49■□□□□ 0.87
SDR39U1-203ENST00000544691 DENND5BQ6ZUT9 1274 aa20.49■□□□□ 0.87
SDR39U1-203ENST00000544691 TMEM150AQ86TG1 271 aa20.49■□□□□ 0.87
SDR39U1-203ENST00000544691 RBBP8NLQ8NC74 664 aaPredicted RBP20.49■□□□□ 0.87
SDR39U1-203ENST00000544691 MCRS1Q96EZ8 462 aa20.49■□□□□ 0.87
SDR39U1-203ENST00000544691 SPATA17Q96L03 361 aa20.49■□□□□ 0.87
SDR39U1-203ENST00000544691 LIMD1Q9UGP4 676 aa20.49■□□□□ 0.87
SDR39U1-203ENST00000544691 LGALS16A8MUM7 142 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 NOL4O94818 638 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 FAM200BP0CF97 657 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 CD19P15391 556 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 ZNF132P52740 706 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 MFAP3P55082 362 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 MAP3K7CLP57077 242 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 CLEC20AQ6ZU45 233 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 ENOSF1Q7L5Y1 443 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 RNF135Q8IUD6 432 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 ZDHHC14Q8IZN3 488 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 TFAP2BQ92481 460 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 ZSWIM3Q96MP5 696 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 ZSWIM1Q9BR11 485 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 LSM14BQ9BX40 385 aaKnown RBP20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 DNAI2Q9GZS0 605 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 EPS15L1Q9UBC2 864 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 CUL9Q8IWT3 2517 aa20.48■□□□□ 0.87
SDR39U1-203ENST00000544691 TADA3O75528 432 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms