RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 HDCP19113 662 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 WARSP23381 471 aaKnown RBP14.2□□□□□ -0.14
CPSF4-210ENST00000469897 GJA4P35212 333 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 MAGEA11P43364 429 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 AFMP43652 599 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 ARHGAP8P85298 464 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 AMPD2Q01433 879 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 FAM160A1Q05DH4 1040 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 MTF1Q14872 753 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 PSMD6Q15008 389 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 PDGFRLQ15198 375 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 VSTM1Q6UX27 236 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 UNC13DQ70J99 1090 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 CEP68Q76N32 757 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 HS2ST1Q7LGA3 356 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 FSIP1Q8NA03 581 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 XXYLT1Q8NBI6 393 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 SPRYD3Q8NCJ5 442 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 OR6B3Q8NGW1 331 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 SNX21Q969T3 373 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 PCED1BQ96HM7 432 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 FNBP1Q96RU3 617 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 ECT2Q9H8V3 914 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 DUS2Q9NX74 493 aaKnown RBP14.2□□□□□ -0.14
CPSF4-210ENST00000469897 GCNT4Q9P109 453 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 NME7Q9Y5B8 376 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 WNT6Q9Y6F9 365 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.2□□□□□ -0.14
CPSF4-210ENST00000469897 CACNA1IQ9P0X4 2223 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 GVINP1Q7Z2Y8 2422 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 DCDC2BA2VCK2 349 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 SDHBP21912 280 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 HOXA6P31267 233 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 ME1P48163 572 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 MYL6P60660 151 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 USP46P62068 366 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 LMNB2Q03252 620 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 CYP24A1Q07973 514 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 EHHADHQ08426 723 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 CUL4BQ13620 913 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 MAPRE1Q15691 268 aaKnown RBP14.19□□□□□ -0.14
CPSF4-210ENST00000469897 WDR72Q3MJ13 1102 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 MDH1BQ5I0G3 518 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 WDR5BQ86VZ2 330 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 MYCBPAPQ8TBZ2 947 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 SH3RF2Q8TEC5 729 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 OSCP1Q8WVF1 389 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 SPATA17Q96L03 361 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 CGRRF1Q99675 332 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 P2RY13Q9BPV8 354 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 FAM13BQ9NYF5 915 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 SLC8A2Q9UPR5 921 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 FAM186AA6NE01 2351 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 ZNF292O60281 2723 aa14.19□□□□□ -0.14
CPSF4-210ENST00000469897 EP300Q09472 2414 aaPredicted RBP14.19□□□□□ -0.14
CPSF4-210ENST00000469897 WDR87Q6ZQQ6 2873 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 AXIN1O15169 862 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 ATG13O75143 517 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 RNF40O75150 1001 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 TACC1O75410 805 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 F13A1P00488 732 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 HSP90AA1P07900 732 aaKnown RBP14.18□□□□□ -0.14
CPSF4-210ENST00000469897 PTPN1P18031 435 aaKnown RBP14.18□□□□□ -0.14
CPSF4-210ENST00000469897 IFNAR2P48551 515 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 SNRPFP62306 86 aaKnown RBP14.18□□□□□ -0.14
CPSF4-210ENST00000469897 ZXDBP98169 803 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 TRPC3Q13507 836 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 ZNF77Q15935 545 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 DENND5BQ6ZUT9 1274 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.18□□□□□ -0.14
CPSF4-210ENST00000469897 GRAMD1CQ8IYS0 662 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 CPA6Q8N4T0 437 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 FAM160A2Q8N612 972 aaPredicted RBP14.18□□□□□ -0.14
CPSF4-210ENST00000469897 RNF38Q9H0F5 515 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 GZF1Q9H116 711 aaPredicted RBP14.18□□□□□ -0.14
CPSF4-210ENST00000469897 SEMA4GQ9NTN9 838 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 TRPM5Q9NZQ8 1165 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 NXF1Q9UBU9 619 aaKnown RBP14.18□□□□□ -0.14
CPSF4-210ENST00000469897 SERTAD1Q9UHV2 236 aa14.18□□□□□ -0.14
CPSF4-210ENST00000469897 CDV3Q9UKY7 258 aaKnown RBP14.18□□□□□ -0.14
CPSF4-210ENST00000469897 PDCD11Q14690 1871 aaKnown RBP14.17□□□□□ -0.14
CPSF4-210ENST00000469897 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.17□□□□□ -0.14
CPSF4-210ENST00000469897 PVALEFA0A1B0GWK0 134 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 A8MXQ7 604 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 EXOC3O60645 756 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 PHACTR2O75167 634 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 ABL1P00519 1130 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 FAM163BP0C2L3 166 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 DRD1P21728 446 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 ANXA13P27216 316 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 CASP4P49662 377 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 CACNA2D1P54289 1103 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 CDH8P55286 799 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 TNNC1P63316 161 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 PKP1Q13835 747 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 KCNB1Q14721 858 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 KNOP1Q1ED39 458 aaKnown RBP14.17□□□□□ -0.14
CPSF4-210ENST00000469897 EML3Q32P44 896 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 RESP18Q5W5W9 173 aa14.17□□□□□ -0.14
CPSF4-210ENST00000469897 EZH1Q92800 747 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms