RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 FAM133AQ8N9E0 248 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 IQUBQ8NA54 791 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 ZNF527Q8NB42 609 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 GALNT11Q8NCW6 608 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 CNNM3Q8NE01 707 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 DNERQ8NFT8 737 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 SMCR8Q8TEV9 937 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 RNF141Q8WVD5 230 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 DHX58Q96C10 678 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 ZBTB10Q96DT7 871 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 FBXL18Q96ME1 805 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 IWS1Q96ST2 819 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 PPP1R16BQ96T49 567 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 PYM1Q9BRP8 204 aaKnown RBP5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 RAB34Q9BZG1 259 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 WDR11Q9BZH6 1224 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 PORCNQ9H237 461 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 ZCCHC17Q9NP64 241 aaKnown RBP5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 STARD7Q9NQZ5 370 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 KCNH7Q9NS40 1196 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 TBC1D22BQ9NU19 505 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 GJD2Q9UKL4 321 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 CBLCQ9ULV8 474 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 ABT1Q9ULW3 272 aaKnown RBP5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 PADI4Q9UM07 663 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 TTLL3Q9Y4R7 772 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 PCDHGB2Q9Y5G2 931 aa5.66□□□□□ -1.5
HMGB1P4-201ENST00000455362 PLXNA1Q9UIW2 1896 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 FSD2A1L4K1 749 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 MEGF11A6BM72 1044 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 IPO5O00410 1097 aaKnown RBP5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 AURKAO14965 403 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 FOXN1O15353 648 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 DHX15O43143 795 aaKnown RBP5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 STRNO43815 780 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 PSMD10O75832 226 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 STAM2O75886 525 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 BAIAP3O94812 1187 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 LRIG2O94898 1065 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 DLGAP3O95886 979 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 CD4P01730 458 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 RPN1P04843 607 aaKnown RBP5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 DHRS4L1P0CG22 281 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 PLS3P13797 630 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 KRT15P19012 456 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 ENPP1P22413 925 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 AMPD1P23109 780 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 YY1P25490 414 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 STT3AP46977 705 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 MTNR1BP49286 362 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 KIF11P52732 1056 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 PPP2R5CQ13362 524 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 KARSQ15046 597 aaKnown RBP5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 POLD3Q15054 466 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 TESK1Q15569 626 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 AGAP9Q5VTM2 703 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 LRCH2Q5VUJ6 765 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 KRT79Q5XKE5 535 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 ARMCX6Q7L4S7 300 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 GET4Q7L5D6 327 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 TBC1D1Q86TI0 1168 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 DMRTC2Q8IXT2 367 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 ZZZ3Q8IYH5 903 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 COLGALT2Q8IYK4 626 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 CEP57L1Q8IYX8 460 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 ANKRD13CQ8N6S4 541 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 DNAJB8Q8NHS0 232 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 LRRC15Q8TF66 581 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 TRAPPC12Q8WVT3 735 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 ERCC4Q92889 916 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 ISL2Q96A47 359 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 PAGE5Q96GU1 130 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 INPP4AQ96PE3 977 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 PARK7Q99497 189 aaKnown RBP5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 PLIN2Q99541 437 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 MMP19Q99542 508 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 RIT2Q99578 217 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 ZNF577Q9BSK1 485 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 MCMBPQ9BTE3 642 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 FUCA2Q9BTY2 467 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 RNF208Q9H0X6 261 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 ALG13Q9NP73 1137 aaKnown RBP5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 CHST7Q9NS84 486 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 CLEC1BQ9P126 229 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 ADD3Q9UEY8 706 aaKnown RBP5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 CCDC39Q9UFE4 941 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 HOOK1Q9UJC3 728 aaKnown RBP5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 VAV3Q9UKW4 847 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 FRMD4BQ9Y2L6 1034 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 CEP83Q9Y592 693 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 PCDHA2Q9Y5H9 948 aa5.65□□□□□ -1.5
HMGB1P4-201ENST00000455362 MYH9P35579 1960 aaKnown RBP5.65□□□□□ -1.51
HMGB1P4-201ENST00000455362 ASTN1O14525 1302 aa5.65□□□□□ -1.51
HMGB1P4-201ENST00000455362 ADGRA2Q96PE1 1338 aa5.65□□□□□ -1.51
HMGB1P4-201ENST00000455362 PLXNB2O15031 1838 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 PCNTO95613 3336 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 DOCK5Q9H7D0 1870 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 LCHNA4D1U4 455 aa5.64□□□□□ -1.51
HMGB1P4-201ENST00000455362 B4DLN1 442 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms