RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 GRIK1P39086 918 aa22.49■■□□□ 1.19
VSX1-206ENST00000444511 FNTBP49356 437 aa22.49■■□□□ 1.19
VSX1-206ENST00000444511 AMPD2Q01433 879 aa22.49■■□□□ 1.19
VSX1-206ENST00000444511 FAM160A1Q05DH4 1040 aa22.49■■□□□ 1.19
VSX1-206ENST00000444511 CUL4BQ13620 913 aa22.49■■□□□ 1.19
VSX1-206ENST00000444511 PUM1Q14671 1186 aaKnown RBP eCLIP22.49■■□□□ 1.19
VSX1-206ENST00000444511 PDGFRLQ15198 375 aa22.49■■□□□ 1.19
VSX1-206ENST00000444511 LPAL2Q16609 132 aa22.49■■□□□ 1.19
VSX1-206ENST00000444511 PRR23BQ6ZRT6 265 aa22.49■■□□□ 1.19
VSX1-206ENST00000444511 CGNQ9P2M7 1197 aaKnown RBP22.49■■□□□ 1.19
VSX1-206ENST00000444511 K7ESF4 209 aa22.48■■□□□ 1.19
VSX1-206ENST00000444511 ARSAP15289 507 aa22.48■■□□□ 1.19
VSX1-206ENST00000444511 BDNFP23560 247 aa22.48■■□□□ 1.19
VSX1-206ENST00000444511 ANXA13P27216 316 aa22.48■■□□□ 1.19
VSX1-206ENST00000444511 GNL1P36915 607 aaPredicted RBP22.48■■□□□ 1.19
VSX1-206ENST00000444511 TNNC1P63316 161 aa22.48■■□□□ 1.19
VSX1-206ENST00000444511 DMWDQ09019 674 aa22.48■■□□□ 1.19
VSX1-206ENST00000444511 GRSF1Q12849 480 aaKnown RBP eCLIP22.48■■□□□ 1.19
VSX1-206ENST00000444511 TRPC3Q13507 836 aa22.48■■□□□ 1.19
VSX1-206ENST00000444511 MTF1Q14872 753 aa22.48■■□□□ 1.19
VSX1-206ENST00000444511 BMT2Q1RMZ1 405 aa22.48■■□□□ 1.19
VSX1-206ENST00000444511 HEATR6Q6AI08 1181 aaKnown RBP22.48■■□□□ 1.19
VSX1-206ENST00000444511 DGLUCYQ7Z3D6 616 aa22.48■■□□□ 1.19
VSX1-206ENST00000444511 SPRYD3Q8NCJ5 442 aa22.48■■□□□ 1.19
VSX1-206ENST00000444511 RIN3Q8TB24 985 aa22.48■■□□□ 1.19
VSX1-206ENST00000444511 SPATA17Q96L03 361 aa22.48■■□□□ 1.19
VSX1-206ENST00000444511 CYP2S1Q96SQ9 504 aa22.48■■□□□ 1.19
VSX1-206ENST00000444511 OTOL1A6NHN0 477 aaPredicted RBP22.47■■□□□ 1.19
VSX1-206ENST00000444511 EXOC3O60645 756 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 TACC1O75410 805 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 DNM1Q05193 864 aaKnown RBP22.47■■□□□ 1.19
VSX1-206ENST00000444511 PKP1Q13835 747 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 SIM2Q14190 667 aaPredicted RBP22.47■■□□□ 1.19
VSX1-206ENST00000444511 KCNB1Q14721 858 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 KNOP1Q1ED39 458 aaKnown RBP22.47■■□□□ 1.19
VSX1-206ENST00000444511 WDR72Q3MJ13 1102 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 TMEM196Q5HYL7 178 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 MDH1BQ5I0G3 518 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 LAIR1Q6GTX8 287 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 LONP2Q86WA8 852 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 C12orf56Q8IXR9 622 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 GRAMD1CQ8IYS0 662 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 OR6B3Q8NGW1 331 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 MYCBPAPQ8TBZ2 947 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 PCED1BQ96HM7 432 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 CEP295NLQ96MC4 621 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 SLC22A12Q96S37 553 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 MRPL45Q9BRJ2 306 aaKnown RBP22.47■■□□□ 1.19
VSX1-206ENST00000444511 C2orf42Q9NWW7 574 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 USP18Q9UMW8 372 aa22.47■■□□□ 1.19
VSX1-206ENST00000444511 TRDMT1O14717 391 aaKnown RBP22.46■■□□□ 1.19
VSX1-206ENST00000444511 CNR2P34972 360 aa22.46■■□□□ 1.19
VSX1-206ENST00000444511 ZNF77Q15935 545 aa22.46■■□□□ 1.19
VSX1-206ENST00000444511 RSPO4Q2I0M5 234 aaPredicted RBP22.46■■□□□ 1.19
VSX1-206ENST00000444511 FSTL4Q6MZW2 842 aa22.46■■□□□ 1.19
VSX1-206ENST00000444511 DENND5BQ6ZUT9 1274 aa22.46■■□□□ 1.19
VSX1-206ENST00000444511 CPA6Q8N4T0 437 aa22.46■■□□□ 1.19
VSX1-206ENST00000444511 ARL14EPQ8N8R7 260 aaPredicted RBP22.46■■□□□ 1.19
VSX1-206ENST00000444511 GOLGA5Q8TBA6 731 aa22.46■■□□□ 1.19
VSX1-206ENST00000444511 EXOC4Q96A65 974 aa22.46■■□□□ 1.19
VSX1-206ENST00000444511 DUS2Q9NX74 493 aaKnown RBP22.46■■□□□ 1.19
VSX1-206ENST00000444511 EHD2Q9NZN4 543 aa22.46■■□□□ 1.19
VSX1-206ENST00000444511 SERTAD1Q9UHV2 236 aa22.46■■□□□ 1.19
VSX1-206ENST00000444511 RCOR1Q9UKL0 485 aa22.46■■□□□ 1.19
VSX1-206ENST00000444511 FRYLO94915 3013 aa22.46■■□□□ 1.19
VSX1-206ENST00000444511 C2orf78A6NCI8 922 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 TRIM66O15016 1216 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 PHACTR2O75167 634 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 CLSTN1O94985 981 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 FAM163BP0C2L3 166 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 SLFN14P0C7P3 912 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 HDCP19113 662 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 IFNAR2P48551 515 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 PDE6CP51160 858 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 MYL6P60660 151 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 LMNB2Q03252 620 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 USP4Q13107 963 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 OSCP1Q8WVF1 389 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 ZNF516Q92618 1163 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 CHFRQ96EP1 664 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 EXOC1Q9NV70 894 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 DLL3Q9NYJ7 618 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 TRPM5Q9NZQ8 1165 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 GCNT4Q9P109 453 aa22.45■■□□□ 1.18
VSX1-206ENST00000444511 NXF1Q9UBU9 619 aaKnown RBP22.45■■□□□ 1.18
VSX1-206ENST00000444511 KIF26AQ9ULI4 1882 aaPredicted RBP22.45■■□□□ 1.18
VSX1-206ENST00000444511 DCHS1Q96JQ0 3298 aa22.44■■□□□ 1.18
VSX1-206ENST00000444511 HRO43593 1189 aa22.44■■□□□ 1.18
VSX1-206ENST00000444511 ATG13O75143 517 aa22.44■■□□□ 1.18
VSX1-206ENST00000444511 STAU1O95793 577 aaKnown RBP22.44■■□□□ 1.18
VSX1-206ENST00000444511 HOXA6P31267 233 aa22.44■■□□□ 1.18
VSX1-206ENST00000444511 ATICP31939 592 aa22.44■■□□□ 1.18
VSX1-206ENST00000444511 SRSF5Q13243 272 aaKnown RBP22.44■■□□□ 1.18
VSX1-206ENST00000444511 SH3RF2Q8TEC5 729 aa22.44■■□□□ 1.18
VSX1-206ENST00000444511 ATP2A3Q93084 1043 aa22.44■■□□□ 1.18
VSX1-206ENST00000444511 SYAP1Q96A49 352 aaPredicted RBP22.44■■□□□ 1.18
VSX1-206ENST00000444511 P2RY13Q9BPV8 354 aa22.44■■□□□ 1.18
VSX1-206ENST00000444511 GZF1Q9H116 711 aaPredicted RBP22.44■■□□□ 1.18
VSX1-206ENST00000444511 ECT2Q9H8V3 914 aa22.44■■□□□ 1.18
VSX1-206ENST00000444511 WNT6Q9Y6F9 365 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms