RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 RAB30Q15771 203 aa22.3■■□□□ 1.16
VPS13B-204ENST00000441350 MCOLN2Q8IZK6 566 aa22.3■■□□□ 1.16
VPS13B-204ENST00000441350 SPPL3Q8TCT6 385 aa22.3■■□□□ 1.16
VPS13B-204ENST00000441350 STK32AQ8WU08 396 aa22.3■■□□□ 1.16
VPS13B-204ENST00000441350 SMARCD1Q96GM5 515 aa22.3■■□□□ 1.16
VPS13B-204ENST00000441350 VCPIP1Q96JH7 1222 aa22.3■■□□□ 1.16
VPS13B-204ENST00000441350 CLSTN3Q9BQT9 956 aa22.3■■□□□ 1.16
VPS13B-204ENST00000441350 ALG13Q9NP73 1137 aaKnown RBP22.3■■□□□ 1.16
VPS13B-204ENST00000441350 KRT82Q9NSB4 513 aa22.3■■□□□ 1.16
VPS13B-204ENST00000441350 CDY1Q9Y6F8 540 aa22.3■■□□□ 1.16
VPS13B-204ENST00000441350 TULP2O00295 520 aa22.29■■□□□ 1.16
VPS13B-204ENST00000441350 CCP110O43303 1012 aa22.29■■□□□ 1.16
VPS13B-204ENST00000441350 FAM200BP0CF97 657 aa22.29■■□□□ 1.16
VPS13B-204ENST00000441350 NPR3P17342 541 aa22.29■■□□□ 1.16
VPS13B-204ENST00000441350 UBE3AQ05086 875 aa22.29■■□□□ 1.16
VPS13B-204ENST00000441350 C1QBPQ07021 282 aaKnown RBP22.29■■□□□ 1.16
VPS13B-204ENST00000441350 SMARCB1Q12824 385 aa22.29■■□□□ 1.16
VPS13B-204ENST00000441350 PDCLQ13371 301 aa22.29■■□□□ 1.16
VPS13B-204ENST00000441350 CFAP221Q4G0U5 840 aa22.29■■□□□ 1.16
VPS13B-204ENST00000441350 CLEC20AQ6ZU45 233 aa22.29■■□□□ 1.16
VPS13B-204ENST00000441350 SPATA2LQ8IUW3 424 aaPredicted RBP22.29■■□□□ 1.16
VPS13B-204ENST00000441350 TXLNBQ8N3L3 684 aa22.29■■□□□ 1.16
VPS13B-204ENST00000441350 FUBP3Q96I24 572 aaKnown RBP eCLIP22.29■■□□□ 1.16
VPS13B-204ENST00000441350 PPP1R13BQ96KQ4 1090 aa22.29■■□□□ 1.16
VPS13B-204ENST00000441350 C11orf84Q9BUA3 381 aaPredicted RBP22.29■■□□□ 1.16
VPS13B-204ENST00000441350 CSNK1G1Q9HCP0 422 aa22.29■■□□□ 1.16
VPS13B-204ENST00000441350 MRPL17Q9NRX2 175 aaKnown RBP22.29■■□□□ 1.16
VPS13B-204ENST00000441350 TMEM30AQ9NV96 361 aa22.29■■□□□ 1.16
VPS13B-204ENST00000441350 MSRAQ9UJ68 235 aa22.29■■□□□ 1.16
VPS13B-204ENST00000441350 MYH10P35580 1976 aa22.29■■□□□ 1.16
VPS13B-204ENST00000441350 BEST1O76090 585 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 TMEM253P0C7T8 217 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 RPL17P18621 184 aaKnown RBP22.28■■□□□ 1.16
VPS13B-204ENST00000441350 OR1D2P34982 312 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 RPL34P49207 117 aaKnown RBP22.28■■□□□ 1.16
VPS13B-204ENST00000441350 PTPN14Q15678 1187 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 PTPN20Q4JDL3 420 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 PMF1Q6P1K2 205 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 MMS22LQ6ZRQ5 1243 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 ERICH1Q86X53 443 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 AUTS2Q8WXX7 1259 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 NOX5Q96PH1 765 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 CPXM1Q96SM3 734 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 SMOQ99835 787 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 SLC4A5Q9BY07 1137 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 RHOBTB2Q9BYZ6 727 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 RXFP1Q9HBX9 757 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.28■■□□□ 1.16
VPS13B-204ENST00000441350 ADAM22Q9P0K1 906 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 MTUS1Q9ULD2 1270 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 SSX2IPQ9Y2D8 614 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 XPO1O14980 1071 aaKnown RBP22.28■■□□□ 1.16
VPS13B-204ENST00000441350 AP1G2O75843 785 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 VNN2O95498 520 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 ABL1P00519 1130 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 CPB1P15086 417 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 ABCB4P21439 1286 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 BDNFP23560 247 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 DNAJB2P25686 324 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 PLA2G4AP47712 749 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 CACNA2D1P54289 1103 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 ARPP19P56211 112 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 ROR1Q01973 937 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 KIF5AQ12840 1032 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 ZMIZ2Q8NF64 920 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 C11orf70Q9BRQ4 267 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 THAP2Q9H0W7 228 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 ABCB6Q9NP58 842 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 FNIP2Q9P278 1114 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 PCDHB5Q9Y5E4 795 aa22.28■■□□□ 1.16
VPS13B-204ENST00000441350 GABBR2O75899 941 aa22.27■■□□□ 1.16
VPS13B-204ENST00000441350 DNAJB1P25685 340 aa22.27■■□□□ 1.16
VPS13B-204ENST00000441350 GABRB2P47870 512 aa22.27■■□□□ 1.16
VPS13B-204ENST00000441350 SLC8A3P57103 927 aa22.27■■□□□ 1.16
VPS13B-204ENST00000441350 CREMQ03060 361 aa22.27■■□□□ 1.16
VPS13B-204ENST00000441350 C2CD6Q53TS8 623 aa22.27■■□□□ 1.16
VPS13B-204ENST00000441350 RNF19BQ6ZMZ0 732 aa22.27■■□□□ 1.16
VPS13B-204ENST00000441350 C2orf15Q8WU43 125 aaKnown RBP22.27■■□□□ 1.16
VPS13B-204ENST00000441350 POF1BQ8WVV4 589 aa22.27■■□□□ 1.16
VPS13B-204ENST00000441350 CTNNBL1Q8WYA6 563 aaPredicted RBP22.27■■□□□ 1.16
VPS13B-204ENST00000441350 TRIM11Q96F44 468 aa22.27■■□□□ 1.16
VPS13B-204ENST00000441350 UBXN6Q9BZV1 441 aa22.27■■□□□ 1.16
VPS13B-204ENST00000441350 NKX2-4Q9H2Z4 354 aa22.27■■□□□ 1.16
VPS13B-204ENST00000441350 CYLDQ9NQC7 956 aa22.27■■□□□ 1.16
VPS13B-204ENST00000441350 ABI2Q9NYB9 513 aaPredicted RBP22.27■■□□□ 1.16
VPS13B-204ENST00000441350 CHD7Q9P2D1 2997 aa22.27■■□□□ 1.16
VPS13B-204ENST00000441350 IRAK3Q9Y616 596 aa22.27■■□□□ 1.16
VPS13B-204ENST00000441350 DUSP10Q9Y6W6 482 aa22.27■■□□□ 1.16
VPS13B-204ENST00000441350 WDR27A2RRH5 827 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 MTMR11A4FU01 709 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 GOLGA6L9A6NEM1 432 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 BTNL10A8MVZ5 291 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 CALB1P05937 261 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 MYBL1P10243 752 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 CYP2F1P24903 491 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 ERVFC1P60507 584 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 GPC5P78333 572 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 RAB33AQ14088 237 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 TMEM110Q86TL2 294 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 PIGZQ86VD9 579 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms