RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 P2RX5Q93086 422 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 DCUN1D1Q96GG9 259 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 CCSER1Q9C0I3 900 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 SOX11P35716 441 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 FAM26FQ5R3K3 315 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 ITPRIPL1Q6GPH6 555 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 LRRC71Q8N4P6 559 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 APOL6Q9BWW8 343 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 CYP21A2P08686 494 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 SCTRP47872 440 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 KCNQ4P56696 695 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 RAB25P57735 213 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 FAM160B1Q5W0V3 765 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 DSTYKQ6XUX3 929 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 YIPF2Q9BWQ6 316 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 PCDHA1Q9Y5I3 950 aa11.58□□□□□ -0.56
HDGFL3-201ENST00000299633 ATG7O95352 703 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 GCLCP48506 637 aaPredicted RBP11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 PDS5AQ29RF7 1337 aaKnown RBP11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 KLHL41O60662 606 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 HSD3B1P14060 373 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 BTDP43251 543 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 SURF1Q15526 300 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 ABI1Q8IZP0 508 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 TSPAN14Q8NG11 270 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 S100PBPQ96BU1 408 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 NQO1P15559 274 aaKnown RBP11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 CACNB1Q02641 598 aaPredicted RBP11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 MTHFD1LQ6UB35 978 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 LRRC1Q9BTT6 524 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 NUAK2Q9H093 628 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 KCNIP3Q9Y2W7 256 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 MYL12BO14950 172 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 HOXC8P31273 242 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 MXI1P50539 228 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 MZT2AQ6P582 158 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 CHERPQ8IWX8 916 aaKnown RBP11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 DCLRE1BQ9H816 532 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 ABCG2Q9UNQ0 655 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 PSIP1O75475 530 aaKnown RBP11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 CHRNDQ07001 517 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 PUS3Q9BZE2 481 aaKnown RBP11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 PHACTR1Q9C0D0 580 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 KIF13AQ9H1H9 1805 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 HEATR5BQ9P2D3 2071 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 GJA1P17302 382 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 ARMCX2Q7L311 632 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 TTC30AQ86WT1 665 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 PNKPQ96T60 521 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 TEKT3Q9BXF9 490 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 MIF4GDA9UHW6 222 aaKnown RBP11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 H3BQF6 201 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 SWI5Q1ZZU3 235 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 EPC2Q52LR7 807 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 KCTD4Q8WVF5 259 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 SPEF1Q9Y4P9 236 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 ALOX5P09917 674 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 IL5RAQ01344 420 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 ICA1Q05084 483 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 C5orf22Q49AR2 442 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 KCTD1Q719H9 257 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 ZNF554Q86TJ5 538 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 ARHGEF19Q8IW93 802 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 EFHBQ8N7U6 833 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 C7orf31Q8N865 590 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 TRPV3Q8NET8 790 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 LENG1Q96BZ8 264 aaPredicted RBP11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 TSEN34Q9BSV6 310 aaKnown RBP11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 TMEM206Q9H813 350 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 CMTM6Q9NX76 183 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 CEP72Q9P209 647 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 ABT1Q9ULW3 272 aaKnown RBP11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 AKT3Q9Y243 479 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 ERVV-2B6SEH9 535 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 SH2B2O14492 632 aaPredicted RBP11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 PABPC4Q13310 644 aaKnown RBP eCLIP11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 EID3Q8N140 333 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 BICRALQ6AI39 1079 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 PAGE5Q96GU1 130 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 RNPC3Q96LT9 517 aaKnown RBP11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 ACCSQ96QU6 501 aa11.57□□□□□ -0.56
HDGFL3-201ENST00000299633 LOC100506127A0A0U1RQW1 187 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 TRIM3O75382 744 aaPredicted RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 CCZ1BP86790 482 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 CCZ1P86791 482 aaPredicted RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 PSMD5Q16401 504 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 SULT1C3Q6IMI6 304 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 SCFD2Q8WU76 684 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 CHKBQ9Y259 395 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 GIT1Q9Y2X7 761 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 UNC13BO14795 1591 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 VIL1P09327 827 aaKnown RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 HK2P52789 917 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 TIMM50Q3ZCQ8 353 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 RESP18Q5W5W9 173 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 SYDE1Q6ZW31 735 aaPredicted RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 DGCR14Q96DF8 476 aaKnown RBP11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 TRIM10Q9UDY6 481 aa11.56□□□□□ -0.56
HDGFL3-201ENST00000299633 PCSK1NQ9UHG2 260 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms