RNA–Protein interactions for RNA: snR87

snR87, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR87, Length 109 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR87snR87 RPS1AP33442 255 aaKnown RBP-3.66□□□□□ -3
snR87snR87 FAR7P43592 221 aa-3.66□□□□□ -3
snR87snR87 TDA4P47153 279 aa-3.66□□□□□ -3
snR87snR87 COG5P53951 403 aa-3.66□□□□□ -3
snR87snR87 PAA1Q12447 191 aaKnown RBP-3.66□□□□□ -3
snR87snR87 RNR2P09938 399 aaKnown RBP-3.67□□□□□ -3
snR87snR87 VMA6P32366 345 aaKnown RBP-3.67□□□□□ -3
snR87snR87 GSP1P32835 219 aaKnown RBP-3.67□□□□□ -3
snR87snR87 LRP1P38801 184 aaKnown RBP-3.67□□□□□ -3
snR87snR87 YFL019CP43576 117 aa-3.67□□□□□ -3
snR87snR87 MCM22P47167 239 aa-3.67□□□□□ -3
snR87snR87 RCF2P53721 224 aa-3.67□□□□□ -3
snR87snR87 MIX14Q04341 121 aa-3.67□□□□□ -3
snR87snR87 RRG8Q06109 277 aa-3.67□□□□□ -3
snR87snR87 YLR036CQ07986 203 aa-3.67□□□□□ -3
snR87snR87 TFB5Q3E7C1 72 aaPredicted RBP-3.67□□□□□ -3
snR87snR87 BUD4P47136 1447 aa-3.68□□□□□ -3
snR87snR87 RPL6BP05739 176 aaKnown RBP-3.68□□□□□ -3
snR87snR87 UBI4P0CG63 381 aaKnown RBP-3.68□□□□□ -3
snR87snR87 MET16P18408 261 aaPredicted RBP-3.68□□□□□ -3
snR87snR87 LIN1P38852 340 aaPredicted RBP-3.68□□□□□ -3
snR87snR87 BFR1P38934 470 aaKnown RBP RIP-Chip data-3.68□□□□□ -3not detected
snR87snR87 YNL200CP40165 246 aaKnown RBP-3.68□□□□□ -3
snR87snR87 GPI2P46961 280 aa-3.68□□□□□ -3
snR87snR87 TOS6P48560 102 aa-3.68□□□□□ -3
snR87snR87 SNU23Q12368 194 aaPredicted RBP-3.68□□□□□ -3
snR87snR87 SEC4P07560 215 aaKnown RBP-3.69□□□□□ -3
snR87snR87 PAU21P0CE86 164 aa-3.69□□□□□ -3
snR87snR87 PAU22P0CE87 164 aa-3.69□□□□□ -3
snR87snR87 MATALPHA1P0CY06 175 aa-3.69□□□□□ -3
snR87snR87 HMLALPHA1P0CY07 175 aa-3.69□□□□□ -3
snR87snR87 DPB3P27344 201 aa-3.69□□□□□ -3
snR87snR87 NFU1P32860 256 aa-3.69□□□□□ -3
snR87snR87 HOP2P53187 214 aa-3.69□□□□□ -3
snR87snR87 YMR315WQ04869 349 aaKnown RBP-3.69□□□□□ -3
snR87snR87 YLR126CQ12288 251 aa-3.69□□□□□ -3
snR87snR87 YHR214C-EQ8TGK0 99 aa-3.69□□□□□ -3
snR87snR87 TAH1P25638 111 aaPredicted RBP-3.7□□□□□ -3
snR87snR87 YOR072W-BQ3E832 53 aa-3.7□□□□□ -3
snR87snR87 QCR2P07257 368 aa-3.71□□□□□ -3
snR87snR87 HUR1P45820 110 aa-3.71□□□□□ -3
snR87snR87 YNL260CP53846 198 aa-3.71□□□□□ -3
snR87snR87 YNL140CP53910 189 aa-3.71□□□□□ -3
snR87snR87 ECM29P38737 1868 aa-3.72□□□□□ -3
snR87snR87 RPL22AP05749 121 aaKnown RBP-3.72□□□□□ -3
snR87snR87 RAD6P06104 172 aa-3.72□□□□□ -3
snR87snR87 TPM1P17536 199 aaKnown RBP-3.72□□□□□ -3
snR87snR87 HMF1P40037 129 aaKnown RBP-3.72□□□□□ -3
snR87snR87 AIM19P40502 157 aa-3.72□□□□□ -3
snR87snR87 YGL193CP53097 103 aa-3.72□□□□□ -3
snR87snR87 YDR209CQ03480 137 aa-3.72□□□□□ -3
snR87snR87 YLR283WQ05867 314 aa-3.72□□□□□ -3
snR87snR87 YOR289WQ12012 251 aaPredicted RBP-3.72□□□□□ -3
snR87snR87 GTT2Q12390 233 aa-3.72□□□□□ -3
snR87snR87 YLR412C-AQ3E742 68 aa-3.72□□□□□ -3
snR87snR87 SPA2P23201 1466 aaKnown RBP-3.73□□□□□ -3.01
snR87snR87 IES5P40060 125 aa-3.73□□□□□ -3.01
snR87snR87 EDC1P53080 175 aaPredicted RBP-3.73□□□□□ -3.01
snR87snR87 YPL067CQ02754 198 aa-3.73□□□□□ -3.01
snR87snR87 YPR114WQ06107 315 aa-3.73□□□□□ -3.01
snR87snR87 RRT7Q07829 113 aa-3.73□□□□□ -3.01
snR87snR87 PGC1Q08959 321 aa-3.73□□□□□ -3.01
snR87snR87 CSM1P25651 190 aa-3.74□□□□□ -3.01
snR87snR87 TAF14P35189 244 aa-3.74□□□□□ -3.01
snR87snR87 FIG1P38224 298 aa-3.74□□□□□ -3.01
snR87snR87 RTT105P40063 208 aa-3.74□□□□□ -3.01
snR87snR87 PHB1P40961 287 aa-3.74□□□□□ -3.01
snR87snR87 YRB1P41920 201 aaKnown RBP-3.74□□□□□ -3.01
snR87snR87 AIM11P87275 137 aa-3.74□□□□□ -3.01
snR87snR87 TRM3Q07527 1436 aa-3.74□□□□□ -3.01
snR87snR87 NBL1Q3E7Y6 73 aa-3.74□□□□□ -3.01
snR87snR87 CNB1P25296 175 aa-3.75□□□□□ -3.01
snR87snR87 SRP102P36057 244 aaPredicted RBP-3.75□□□□□ -3.01
snR87snR87 SFT2P38166 215 aa-3.75□□□□□ -3.01
snR87snR87 FYV4P38783 130 aaPredicted RBP-3.75□□□□□ -3.01
snR87snR87 IMP2P46972 177 aa-3.75□□□□□ -3.01
snR87snR87 TIM8P57744 87 aa-3.75□□□□□ -3.01
snR87snR87 Q0017Q9ZZX8 53 aa-3.75□□□□□ -3.01
snR87snR87 YTA7P40340 1379 aa-3.76□□□□□ -3.01
snR87snR87 RTC6O14464 93 aa-3.76□□□□□ -3.01
snR87snR87 BCY1P07278 416 aaKnown RBP-3.76□□□□□ -3.01
snR87snR87 YLR031WQ07978 186 aa-3.76□□□□□ -3.01
snR87snR87 NAT5Q08689 176 aa-3.76□□□□□ -3.01
snR87snR87 COX5BP00425 151 aa-3.77□□□□□ -3.01
snR87snR87 COX7P10174 60 aa-3.77□□□□□ -3.01
snR87snR87 FYV5P25585 152 aa-3.77□□□□□ -3.01
snR87snR87 RSM18P40033 138 aa-3.77□□□□□ -3.01
snR87snR87 PAM16P42949 149 aa-3.77□□□□□ -3.01
snR87snR87 MRX5P47007 382 aa-3.77□□□□□ -3.01
snR87snR87 LSM7P53905 115 aaKnown RBP-3.77□□□□□ -3.01
snR87snR87 CUR1Q06469 252 aa-3.77□□□□□ -3.01
snR87snR87 YOR214CQ12282 236 aa-3.77□□□□□ -3.01
snR87snR87 RAD50P12753 1312 aa-3.77□□□□□ -3.01
snR87snR87 URA6P15700 204 aa-3.78□□□□□ -3.01
snR87snR87 SAR1P20606 190 aaKnown RBP-3.78□□□□□ -3.01
snR87snR87 GDI1P39958 451 aaKnown RBP-3.78□□□□□ -3.01
snR87snR87 YER121WP40076 114 aa-3.78□□□□□ -3.01
snR87snR87 HTB1P02293 131 aaKnown RBP-3.79□□□□□ -3.02
snR87snR87 HTB2P02294 131 aa-3.79□□□□□ -3.02
snR87snR87 TRR1P29509 319 aaKnown RBP-3.79□□□□□ -3.02
Retrieved 100 of 5,963 RNA–protein pairs in 119.7 ms