RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C APS3P47064 194 aa1.64□□□□□ -2.15
RPC40YPR110C MOG1P47123 218 aa1.64□□□□□ -2.15
RPC40YPR110C MPC1P53157 130 aaKnown RBP1.64□□□□□ -2.15
RPC40YPR110C DAD4P69851 72 aa1.64□□□□□ -2.15
RPC40YPR110C TMA20P89886 181 aaPredicted RBP1.64□□□□□ -2.15
RPC40YPR110C NCE101Q02820 53 aa1.64□□□□□ -2.15
RPC40YPR110C IRC23Q08416 157 aa1.64□□□□□ -2.15
RPC40YPR110C PST2Q12335 198 aaKnown RBP1.64□□□□□ -2.15
RPC40YPR110C MED11Q99278 115 aa1.64□□□□□ -2.15
RPC40YPR110C ACC1Q00955 2233 aaKnown RBP1.64□□□□□ -2.15
RPC40YPR110C HFA1P32874 2273 aa1.63□□□□□ -2.15
RPC40YPR110C IDP1P21954 428 aaKnown RBP1.63□□□□□ -2.15
RPC40YPR110C TIM12P32830 109 aa1.63□□□□□ -2.15
RPC40YPR110C SFK1P35735 353 aa1.63□□□□□ -2.15
RPC40YPR110C CSH1P38287 376 aa1.63□□□□□ -2.15
RPC40YPR110C IPT1P38954 527 aa1.63□□□□□ -2.15
RPC40YPR110C SPC25P40014 221 aa1.63□□□□□ -2.15
RPC40YPR110C GPI14P47088 403 aaKnown RBP1.63□□□□□ -2.15
RPC40YPR110C GRX5Q02784 150 aa1.63□□□□□ -2.15
RPC40YPR110C DML1Q03652 475 aa1.63□□□□□ -2.15
RPC40YPR110C ELP6Q04868 273 aa1.63□□□□□ -2.15
RPC40YPR110C UIP4Q08926 304 aa1.63□□□□□ -2.15
RPC40YPR110C SPC3Q12133 184 aa1.63□□□□□ -2.15
RPC40YPR110C DGK1Q12382 290 aa1.63□□□□□ -2.15
RPC40YPR110C TOR2P32600 2474 aaKnown RBP1.63□□□□□ -2.15
RPC40YPR110C HSP30P25619 332 aa1.62□□□□□ -2.15
RPC40YPR110C HSP150P32478 413 aa1.62□□□□□ -2.15
RPC40YPR110C RPS20P38701 121 aaKnown RBP1.62□□□□□ -2.15
RPC40YPR110C NSA2P40078 261 aaKnown RBP1.62□□□□□ -2.15
RPC40YPR110C YPL073CP40323 161 aa1.62□□□□□ -2.15
RPC40YPR110C RBL2P48606 106 aaKnown RBP1.62□□□□□ -2.15
RPC40YPR110C YGL101WP53144 215 aa1.62□□□□□ -2.15
RPC40YPR110C MAK3Q03503 176 aa1.62□□□□□ -2.15
RPC40YPR110C MIX14Q04341 121 aa1.62□□□□□ -2.15
RPC40YPR110C YMR253CQ04835 414 aa1.62□□□□□ -2.15
RPC40YPR110C YHR007C-AQ07074 71 aa1.62□□□□□ -2.15
RPC40YPR110C SEN1Q00416 2231 aaKnown RBP1.61□□□□□ -2.15
RPC40YPR110C KIN28P06242 306 aa1.61□□□□□ -2.15
RPC40YPR110C QCR8P08525 94 aa1.61□□□□□ -2.15
RPC40YPR110C YGL041W-AP0C5N3 154 aa1.61□□□□□ -2.15
RPC40YPR110C PAM17P36147 197 aa1.61□□□□□ -2.15
RPC40YPR110C IPI1P38803 334 aaPredicted RBP1.61□□□□□ -2.15
RPC40YPR110C YNL200CP40165 246 aaKnown RBP1.61□□□□□ -2.15
RPC40YPR110C RFC2P40348 353 aa1.61□□□□□ -2.15
RPC40YPR110C FLX1P40464 311 aa1.61□□□□□ -2.15
RPC40YPR110C YGR042WP53227 271 aa1.61□□□□□ -2.15
RPC40YPR110C PRP11Q07350 266 aaPredicted RBP1.61□□□□□ -2.15
RPC40YPR110C IRC19Q07843 230 aa1.61□□□□□ -2.15
RPC40YPR110C YFR010W-AP0C5N0 62 aa1.6□□□□□ -2.15
RPC40YPR110C UBI4P0CG63 381 aaKnown RBP1.6□□□□□ -2.15
RPC40YPR110C YHR214C-DP0CX93 97 aa1.6□□□□□ -2.15
RPC40YPR110C UTP11P34247 250 aaPredicted RBP1.6□□□□□ -2.15
RPC40YPR110C YHL018WP38744 120 aaPredicted RBP1.6□□□□□ -2.15
RPC40YPR110C YAE1P47118 141 aaPredicted RBP1.6□□□□□ -2.15
RPC40YPR110C YGL204CP53089 101 aa1.6□□□□□ -2.15
RPC40YPR110C THG1P53215 237 aaKnown RBP1.6□□□□□ -2.15
RPC40YPR110C ORM1P53224 222 aa1.6□□□□□ -2.15
RPC40YPR110C PLP1Q04004 230 aa1.6□□□□□ -2.15
RPC40YPR110C THI74Q04083 370 aa1.6□□□□□ -2.15
RPC40YPR110C GAL83Q04739 417 aa1.6□□□□□ -2.15
RPC40YPR110C YOR289WQ12012 251 aaPredicted RBP1.6□□□□□ -2.15
RPC40YPR110C YPR013CQ12145 317 aa1.6□□□□□ -2.15
RPC40YPR110C ATP20Q12233 115 aa1.6□□□□□ -2.15
RPC40YPR110C YOR343CQ12484 108 aa1.6□□□□□ -2.15
RPC40YPR110C YOR032W-AQ8TGS1 66 aa1.6□□□□□ -2.15
RPC40YPR110C CPR5P35176 225 aa1.59□□□□□ -2.15
RPC40YPR110C YJL218WP40892 196 aaKnown RBP1.59□□□□□ -2.15
RPC40YPR110C PHB1P40961 287 aa1.59□□□□□ -2.15
RPC40YPR110C PAM16P42949 149 aa1.59□□□□□ -2.15
RPC40YPR110C XPT1P47165 209 aa1.59□□□□□ -2.15
RPC40YPR110C TTI2P47168 421 aa1.59□□□□□ -2.15
RPC40YPR110C PAU12P53343 120 aa1.59□□□□□ -2.15
RPC40YPR110C YDR102CQ03864 110 aa1.59□□□□□ -2.15
RPC40YPR110C YLR099W-AQ3E798 87 aa1.59□□□□□ -2.15
RPC40YPR110C SUS1Q6WNK7 96 aa1.59□□□□□ -2.15
RPC40YPR110C Q0144Q9ZZW2 109 aa1.59□□□□□ -2.15
RPC40YPR110C ADK1P07170 222 aaKnown RBP1.58□□□□□ -2.16
RPC40YPR110C PAU2P32612 120 aa1.58□□□□□ -2.16
RPC40YPR110C PAU24P38155 120 aa1.58□□□□□ -2.16
RPC40YPR110C YHL042WP38729 150 aa1.58□□□□□ -2.16
RPC40YPR110C HPA3P39979 161 aa1.58□□□□□ -2.16
RPC40YPR110C YJR015WP47090 510 aa1.58□□□□□ -2.16
RPC40YPR110C CCC1P47818 322 aa1.58□□□□□ -2.16
RPC40YPR110C CWC27Q02770 301 aa1.58□□□□□ -2.16
RPC40YPR110C DIG2Q03373 323 aaKnown RBP1.58□□□□□ -2.16
RPC40YPR110C PKR1Q03880 122 aaKnown RBP1.58□□□□□ -2.16
RPC40YPR110C YMR252CQ04814 134 aa1.58□□□□□ -2.16
RPC40YPR110C YMR320WQ04897 101 aa1.58□□□□□ -2.16
RPC40YPR110C FYV12Q08559 129 aa1.58□□□□□ -2.16
RPC40YPR110C ATG41Q12048 136 aa1.58□□□□□ -2.16
RPC40YPR110C YNL146C-AQ3E7Z1 64 aa1.58□□□□□ -2.16
RPC40YPR110C BLM10P43583 2143 aa1.57□□□□□ -2.16
RPC40YPR110C YBR056W-AI2HB52 66 aa1.57□□□□□ -2.16
RPC40YPR110C COX8P04039 78 aa1.57□□□□□ -2.16
RPC40YPR110C COX9P07255 59 aa1.57□□□□□ -2.16
RPC40YPR110C CUP1-1P0CX80 61 aa1.57□□□□□ -2.16
RPC40YPR110C CUP1-2P0CX81 61 aa1.57□□□□□ -2.16
RPC40YPR110C RPL30P14120 105 aaKnown RBP1.57□□□□□ -2.16
RPC40YPR110C SPT14P32363 452 aa1.57□□□□□ -2.16
RPC40YPR110C RRT1P38192 103 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms