RNA–Protein interactions for RNA: YPL233W

NSL1, Transcript of Essential component of the MIND kinetochore complex, yeast

Gene NSL1, Length 651 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSL1	YPL233W	YNL019C	P53975	284 aa		0.89	□□□□□ -2.27
NSL1	YPL233W	CSN9	Q03981	162 aa		0.89	□□□□□ -2.27
NSL1	YPL233W	YHR213W-B	Q8TGK1	99 aa		0.89	□□□□□ -2.27
NSL1	YPL233W	CDC39	P25655	2108 aa	Known RBP	0.88	□□□□□ -2.27
NSL1	YPL233W	RPS22A	P0C0W1	130 aa	Known RBP	0.88	□□□□□ -2.27
NSL1	YPL233W	YJL009W	P47078	108 aa		0.88	□□□□□ -2.27
NSL1	YPL233W	NAT5	Q08689	176 aa		0.88	□□□□□ -2.27
NSL1	YPL233W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.88	□□□□□ -2.27
NSL1	YPL233W	KTI11	Q3E840	82 aa		0.88	□□□□□ -2.27
NSL1	YPL233W	REV3	P14284	1504 aa		0.88	□□□□□ -2.27
NSL1	YPL233W	MYO2	P19524	1574 aa	Known RBP	0.87	□□□□□ -2.27
NSL1	YPL233W	MDS3	P53094	1487 aa		0.87	□□□□□ -2.27
NSL1	YPL233W	RPL40A	P0CH08	128 aa	Known RBP	0.87	□□□□□ -2.27
NSL1	YPL233W	RPL40B	P0CH09	128 aa	Known RBP	0.87	□□□□□ -2.27
NSL1	YPL233W	FUN14	P18411	198 aa		0.87	□□□□□ -2.27
NSL1	YPL233W	YCR050C	P25630	102 aa		0.87	□□□□□ -2.27
NSL1	YPL233W	QCR10	P37299	77 aa		0.87	□□□□□ -2.27
NSL1	YPL233W	SFT2	P38166	215 aa		0.87	□□□□□ -2.27
NSL1	YPL233W	HHY1	P39982	102 aa		0.87	□□□□□ -2.27
NSL1	YPL233W	LST8	P41318	303 aa		0.87	□□□□□ -2.27
NSL1	YPL233W	BRP1	P53194	125 aa		0.87	□□□□□ -2.27
NSL1	YPL233W	YPL067C	Q02754	198 aa		0.87	□□□□□ -2.27
NSL1	YPL233W	MGR2	Q02889	113 aa		0.87	□□□□□ -2.27
NSL1	YPL233W	ELC1	Q03071	99 aa		0.87	□□□□□ -2.27
NSL1	YPL233W	YMR122C	Q03879	124 aa		0.87	□□□□□ -2.27
NSL1	YPL233W	PRM3	Q08931	133 aa		0.87	□□□□□ -2.27
NSL1	YPL233W	YHR213W	P0CI67	198 aa		0.86	□□□□□ -2.27
NSL1	YPL233W	NMT1	P14743	455 aa		0.86	□□□□□ -2.27
NSL1	YPL233W	ANB1	P19211	157 aa		0.86	□□□□□ -2.27
NSL1	YPL233W	MRPL44	P19956	98 aa		0.86	□□□□□ -2.27
NSL1	YPL233W	YAL064W	P39711	94 aa		0.86	□□□□□ -2.27
NSL1	YPL233W	YGL149W	P53116	101 aa		0.86	□□□□□ -2.27
NSL1	YPL233W	HFA1	P32874	2273 aa		0.86	□□□□□ -2.27
NSL1	YPL233W	DNF1	P32660	1571 aa		0.85	□□□□□ -2.27
NSL1	YPL233W	YGL204C	P53089	101 aa		0.85	□□□□□ -2.27
NSL1	YPL233W	TY1B-DR4	Q07793	1604 aa		0.85	□□□□□ -2.27
NSL1	YPL233W	ACP1	P32463	125 aa		0.84	□□□□□ -2.27
NSL1	YPL233W	HYM1	P32464	399 aa		0.84	□□□□□ -2.27
NSL1	YPL233W	UTP11	P34247	250 aa	Predicted RBP	0.84	□□□□□ -2.27
NSL1	YPL233W	AIM4	P38305	123 aa	Predicted RBP	0.84	□□□□□ -2.27
NSL1	YPL233W	GIM4	P40005	111 aa	Known RBP	0.84	□□□□□ -2.27
NSL1	YPL233W	YGR042W	P53227	271 aa		0.84	□□□□□ -2.27
NSL1	YPL233W	SDH7	Q04401	133 aa		0.84	□□□□□ -2.27
NSL1	YPL233W	TVP18	Q04767	167 aa		0.84	□□□□□ -2.27
NSL1	YPL233W	YLR361C-A	Q3E795	98 aa		0.84	□□□□□ -2.27
NSL1	YPL233W	YNL277W-A	Q3E7Z0	62 aa		0.84	□□□□□ -2.27
NSL1	YPL233W	COA6	Q3E846	104 aa		0.84	□□□□□ -2.27
NSL1	YPL233W	SUA7	P29055	345 aa	Predicted RBP	0.83	□□□□□ -2.28
NSL1	YPL233W	YGR017W	P53210	297 aa		0.83	□□□□□ -2.28
NSL1	YPL233W	TIM8	P57744	87 aa		0.83	□□□□□ -2.28
NSL1	YPL233W	COA4	Q05809	96 aa		0.83	□□□□□ -2.28
NSL1	YPL233W	GSC2	P40989	1895 aa		0.83	□□□□□ -2.28
NSL1	YPL233W	SIN3	P22579	1536 aa		0.83	□□□□□ -2.28
NSL1	YPL233W	PEP1	P32319	1579 aa		0.83	□□□□□ -2.28
NSL1	YPL233W	YOR093C	Q12275	1648 aa		0.82	□□□□□ -2.28
NSL1	YPL233W	RTC6	O14464	93 aa		0.82	□□□□□ -2.28
NSL1	YPL233W	HAP3	P13434	144 aa		0.82	□□□□□ -2.28
NSL1	YPL233W	PRS3	P38689	320 aa	Known RBP	0.82	□□□□□ -2.28
NSL1	YPL233W	RPS20	P38701	121 aa	Known RBP	0.82	□□□□□ -2.28
NSL1	YPL233W	PHS1	P40857	217 aa		0.82	□□□□□ -2.28
NSL1	YPL233W	YLR296W	Q05898	108 aa		0.82	□□□□□ -2.28
NSL1	YPL233W	ATP14	Q12349	124 aa		0.82	□□□□□ -2.28
NSL1	YPL233W	GTT2	Q12390	233 aa		0.82	□□□□□ -2.28
NSL1	YPL233W	RPO31	P04051	1460 aa		0.81	□□□□□ -2.28
NSL1	YPL233W	PDR15	Q04182	1529 aa	Known RBP	0.81	□□□□□ -2.28
NSL1	YPL233W	PFY1	P07274	126 aa		0.81	□□□□□ -2.28
NSL1	YPL233W	PAU21	P0CE86	164 aa		0.81	□□□□□ -2.28
NSL1	YPL233W	PAU22	P0CE87	164 aa		0.81	□□□□□ -2.28
NSL1	YPL233W	MRPL11	P36521	249 aa	Predicted RBP	0.81	□□□□□ -2.28
NSL1	YPL233W	YMR141C	P40211	102 aa		0.81	□□□□□ -2.28
NSL1	YPL233W	YDR278C	Q05612	105 aa		0.81	□□□□□ -2.28
NSL1	YPL233W	CNL1	Q06333	122 aa		0.81	□□□□□ -2.28
NSL1	YPL233W	HSP10	P38910	106 aa		0.8	□□□□□ -2.28
NSL1	YPL233W	SFT1	P43682	97 aa		0.8	□□□□□ -2.28
NSL1	YPL233W	MPC1	P53157	130 aa	Known RBP	0.8	□□□□□ -2.28
NSL1	YPL233W	SPC2	Q04969	178 aa		0.8	□□□□□ -2.28
NSL1	YPL233W	MED11	Q99278	115 aa		0.8	□□□□□ -2.28
NSL1	YPL233W	LTE1	P07866	1435 aa		0.8	□□□□□ -2.28
NSL1	YPL233W	SNT2	P53127	1403 aa		0.8	□□□□□ -2.28
NSL1	YPL233W	CDC25	P04821	1589 aa		0.79	□□□□□ -2.28
NSL1	YPL233W	DNF2	Q12675	1612 aa		0.79	□□□□□ -2.28
NSL1	YPL233W	AIM18	P38884	321 aa		0.79	□□□□□ -2.28
NSL1	YPL233W	MVB12	P42939	101 aa		0.79	□□□□□ -2.28
NSL1	YPL233W	Q0144	Q9ZZW2	109 aa		0.79	□□□□□ -2.28
NSL1	YPL233W	TY4B-J	P47024	1803 aa		0.79	□□□□□ -2.28
NSL1	YPL233W	THO2	P53552	1597 aa	Known RBP	0.79	□□□□□ -2.28
NSL1	YPL233W	SSK2	P53599	1579 aa		0.79	□□□□□ -2.28
NSL1	YPL233W	HIR3	P47171	1648 aa		0.78	□□□□□ -2.28
NSL1	YPL233W	RPA190	P10964	1664 aa	Known RBP	0.78	□□□□□ -2.28
NSL1	YPL233W	YBR013C	P38215	129 aa		0.78	□□□□□ -2.28
NSL1	YPL233W	GAT4	P40569	121 aa		0.78	□□□□□ -2.28
NSL1	YPL233W	LDB18	Q07887	179 aa		0.78	□□□□□ -2.28
NSL1	YPL233W	FIT3	Q08907	204 aa		0.78	□□□□□ -2.28
NSL1	YPL233W	YRF1-3	P0CX14	1859 aa		0.78	□□□□□ -2.29
NSL1	YPL233W	YRF1-7	P0CX15	1859 aa		0.78	□□□□□ -2.29
NSL1	YPL233W	YSF3	P0C074	85 aa	Predicted RBP	0.77	□□□□□ -2.29
NSL1	YPL233W	POP7	P38291	140 aa		0.77	□□□□□ -2.29
NSL1	YPL233W	MIC27	P50945	234 aa		0.77	□□□□□ -2.29
NSL1	YPL233W	DYN2	Q02647	92 aa		0.77	□□□□□ -2.29
NSL1	YPL233W	HUG1	Q6Q5K6	68 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms