RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W REV3P14284 1504 aa1.3□□□□□ -2.2
SRP1YNL189W GSC2P40989 1895 aa1.3□□□□□ -2.2
SRP1YNL189W ADK1P07170 222 aaKnown RBP1.29□□□□□ -2.2
SRP1YNL189W ANB1P19211 157 aa1.29□□□□□ -2.2
SRP1YNL189W YEA6P39953 335 aa1.29□□□□□ -2.2
SRP1YNL189W HPA3P39979 161 aa1.29□□□□□ -2.2
SRP1YNL189W SPG1P50088 95 aa1.29□□□□□ -2.2
SRP1YNL189W GEP7P53171 287 aa1.29□□□□□ -2.2
SRP1YNL189W PIR1Q03178 341 aa1.29□□□□□ -2.2
SRP1YNL189W YOR097CQ12274 175 aaPredicted RBP1.29□□□□□ -2.2
SRP1YNL189W KRE5P22023 1365 aa1.29□□□□□ -2.2
SRP1YNL189W HAP3P13434 144 aa1.29□□□□□ -2.2
SRP1YNL189W RPB7P34087 171 aa1.29□□□□□ -2.2
SRP1YNL189W RPB11P38902 120 aa1.29□□□□□ -2.2
SRP1YNL189W CCS1P40202 249 aaKnown RBP1.29□□□□□ -2.2
SRP1YNL189W ELC1Q03071 99 aa1.29□□□□□ -2.2
SRP1YNL189W AVO2Q04749 426 aa1.29□□□□□ -2.2
SRP1YNL189W YKL068W-AQ3E826 78 aa1.29□□□□□ -2.2
SRP1YNL189W STF2P16965 84 aa1.28□□□□□ -2.2
SRP1YNL189W GNA1P43577 159 aaPredicted RBP1.28□□□□□ -2.2
SRP1YNL189W DIE2P50076 525 aa1.28□□□□□ -2.2
SRP1YNL189W UPS3Q04006 179 aa1.28□□□□□ -2.2
SRP1YNL189W YLR042CQ07990 161 aa1.28□□□□□ -2.2
SRP1YNL189W CMC4Q3E7A9 73 aa1.28□□□□□ -2.2
SRP1YNL189W SCS22Q6Q595 175 aa1.28□□□□□ -2.2
SRP1YNL189W ADE6P38972 1358 aaKnown RBP1.27□□□□□ -2.21
SRP1YNL189W MAK31P23059 88 aa1.27□□□□□ -2.21
SRP1YNL189W MPC1P53157 130 aaKnown RBP1.27□□□□□ -2.21
SRP1YNL189W NHP10Q03435 203 aa1.27□□□□□ -2.21
SRP1YNL189W TVP18Q04767 167 aa1.27□□□□□ -2.21
SRP1YNL189W IRC19Q07843 230 aa1.27□□□□□ -2.21
SRP1YNL189W TAR1Q8TGM6 124 aa1.27□□□□□ -2.21
SRP1YNL189W PDR11P40550 1411 aa1.26□□□□□ -2.21
SRP1YNL189W GEA1P47102 1408 aaPredicted RBP1.26□□□□□ -2.21
SRP1YNL189W COX5BP00425 151 aa1.26□□□□□ -2.21
SRP1YNL189W HYP2P23301 157 aaKnown RBP1.26□□□□□ -2.21
SRP1YNL189W YCR050CP25630 102 aa1.26□□□□□ -2.21
SRP1YNL189W YCR099CP25657 155 aa1.26□□□□□ -2.21
SRP1YNL189W GRX5Q02784 150 aa1.26□□□□□ -2.21
SRP1YNL189W KEI1Q06346 221 aa1.26□□□□□ -2.21
SRP1YNL189W GTT2Q12390 233 aa1.26□□□□□ -2.21
SRP1YNL189W YCR075W-AQ3E830 75 aa1.26□□□□□ -2.21
SRP1YNL189W DDP1Q99321 188 aaKnown RBP1.26□□□□□ -2.21
SRP1YNL189W GEA2P39993 1459 aaKnown RBP1.26□□□□□ -2.21
SRP1YNL189W YGL041W-AP0C5N3 154 aa1.26□□□□□ -2.21
SRP1YNL189W YAR029WP39549 74 aa1.26□□□□□ -2.21
SRP1YNL189W YGR269WP40326 108 aa1.26□□□□□ -2.21
SRP1YNL189W PAM16P42949 149 aa1.26□□□□□ -2.21
SRP1YNL189W LSM8P47093 109 aaKnown RBP1.26□□□□□ -2.21
SRP1YNL189W YMR103CQ04436 120 aa1.26□□□□□ -2.21
SRP1YNL189W COA3Q3E7B2 85 aa1.26□□□□□ -2.21
SRP1YNL189W LTE1P07866 1435 aa1.25□□□□□ -2.21
SRP1YNL189W CAT8P39113 1433 aa1.25□□□□□ -2.21
SRP1YNL189W SRL3P36167 246 aa1.25□□□□□ -2.21
SRP1YNL189W YAL064WP39711 94 aa1.25□□□□□ -2.21
SRP1YNL189W YFR035CP43608 114 aa1.25□□□□□ -2.21
SRP1YNL189W ATP19P81451 68 aa1.25□□□□□ -2.21
SRP1YNL189W YCL001W-AP87012 153 aa1.25□□□□□ -2.21
SRP1YNL189W FIT1Q04433 528 aa1.25□□□□□ -2.21
SRP1YNL189W RAF1Q06891 181 aa1.25□□□□□ -2.21
SRP1YNL189W YOR385WQ08909 290 aa1.25□□□□□ -2.21
SRP1YNL189W TY3B-IQ7LHG5 1498 aaKnown RBP1.24□□□□□ -2.21
SRP1YNL189W YML079WQ03629 201 aa1.24□□□□□ -2.21
SRP1YNL189W YOR376W-AQ3E805 51 aa1.24□□□□□ -2.21
SRP1YNL189W MED11Q99278 115 aa1.24□□□□□ -2.21
SRP1YNL189W PDR10P51533 1564 aa1.24□□□□□ -2.21
SRP1YNL189W RSF2P46974 1380 aa1.24□□□□□ -2.21
SRP1YNL189W YRF1-3P0CX14 1859 aa1.23□□□□□ -2.21
SRP1YNL189W YRF1-7P0CX15 1859 aa1.23□□□□□ -2.21
SRP1YNL189W YRF1-6P53819 1859 aa1.23□□□□□ -2.21
SRP1YNL189W PRE1P22141 198 aaKnown RBP1.23□□□□□ -2.21
SRP1YNL189W FYV5P25585 152 aa1.23□□□□□ -2.21
SRP1YNL189W MET31Q03081 177 aa1.23□□□□□ -2.21
SRP1YNL189W YMR090WQ04304 227 aaKnown RBP1.23□□□□□ -2.21
SRP1YNL189W YMR030W-AQ3E760 96 aa1.23□□□□□ -2.21
SRP1YNL189W ESC1Q03661 1658 aaKnown RBP1.22□□□□□ -2.21
SRP1YNL189W UBC4P15731 148 aa1.22□□□□□ -2.21
SRP1YNL189W EMP24P32803 203 aaKnown RBP1.22□□□□□ -2.21
SRP1YNL189W ECM31P38122 312 aa1.22□□□□□ -2.21
SRP1YNL189W SNU13P39990 126 aaKnown RBP1.22□□□□□ -2.21
SRP1YNL189W HUA1P40325 198 aa1.22□□□□□ -2.21
SRP1YNL189W RPL37AP49166 88 aaKnown RBP1.22□□□□□ -2.21
SRP1YNL189W SOM1Q05676 74 aa1.22□□□□□ -2.21
SRP1YNL189W SCP1Q08873 200 aa1.22□□□□□ -2.21
SRP1YNL189W YGL194C-AQ2V2P6 80 aa1.22□□□□□ -2.21
SRP1YNL189W KSH1Q8TGJ3 72 aa1.22□□□□□ -2.21
SRP1YNL189W YSP2Q06681 1438 aa1.22□□□□□ -2.21
SRP1YNL189W SLH1P53327 1967 aaKnown RBP1.22□□□□□ -2.21
SRP1YNL189W HSP150P32478 413 aa1.22□□□□□ -2.21
SRP1YNL189W YKL044WP36092 106 aa1.22□□□□□ -2.21
SRP1YNL189W QCR10P37299 77 aa1.22□□□□□ -2.21
SRP1YNL189W NMA1Q06178 401 aaKnown RBP1.22□□□□□ -2.21
SRP1YNL189W SWC7Q06707 132 aa1.22□□□□□ -2.21
SRP1YNL189W YDL157CQ12082 118 aa1.22□□□□□ -2.21
SRP1YNL189W YOS1Q3E834 85 aa1.22□□□□□ -2.21
SRP1YNL189W YLR365WQ7LIF2 110 aa1.22□□□□□ -2.21
SRP1YNL189W LYS2P07702 1392 aa1.22□□□□□ -2.21
SRP1YNL189W BNI1P41832 1953 aa1.21□□□□□ -2.22
SRP1YNL189W RPS25BP0C0T4 108 aaKnown RBP1.21□□□□□ -2.22
SRP1YNL189W MRPL44P19956 98 aa1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 63 ms