RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C SNF11P38956 169 aa2.28□□□□□ -2.04
SSN8YNL025C YFR035CP43608 114 aa2.28□□□□□ -2.04
SSN8YNL025C DOC1P53068 250 aa2.28□□□□□ -2.04
SSN8YNL025C ERV14P53173 138 aa2.28□□□□□ -2.04
SSN8YNL025C MPC3P53311 146 aa2.28□□□□□ -2.04
SSN8YNL025C MRPS16Q02608 121 aa2.28□□□□□ -2.04
SSN8YNL025C PIR1Q03178 341 aa2.28□□□□□ -2.04
SSN8YNL025C UPS3Q04006 179 aa2.28□□□□□ -2.04
SSN8YNL025C IRC23Q08416 157 aa2.28□□□□□ -2.04
SSN8YNL025C FIT3Q08907 204 aa2.28□□□□□ -2.04
SSN8YNL025C YOR385WQ08909 290 aa2.28□□□□□ -2.04
SSN8YNL025C YLR365WQ7LIF2 110 aa2.28□□□□□ -2.04
SSN8YNL025C YOL085CQ99345 113 aa2.28□□□□□ -2.04
SSN8YNL025C YIL177CP40434 1758 aa2.28□□□□□ -2.04
SSN8YNL025C YJL225CP40889 1758 aa2.28□□□□□ -2.04
SSN8YNL025C VPS15P22219 1454 aa2.27□□□□□ -2.05
SSN8YNL025C PDR11P40550 1411 aa2.27□□□□□ -2.05
SSN8YNL025C YOL162WP0CF19 215 aa2.27□□□□□ -2.05
SSN8YNL025C UBC4P15731 148 aa2.27□□□□□ -2.05
SSN8YNL025C SRB6P32570 121 aa2.27□□□□□ -2.05
SSN8YNL025C MID2P36027 376 aa2.27□□□□□ -2.05
SSN8YNL025C YKL044WP36092 106 aa2.27□□□□□ -2.05
SSN8YNL025C QCR10P37299 77 aa2.27□□□□□ -2.05
SSN8YNL025C YBR209WP38311 105 aa2.27□□□□□ -2.05
SSN8YNL025C KRE9P39005 276 aa2.27□□□□□ -2.05
SSN8YNL025C VMA21P41806 77 aa2.27□□□□□ -2.05
SSN8YNL025C RAD28Q12021 506 aa2.27□□□□□ -2.05
SSN8YNL025C ATG40Q99325 256 aa2.27□□□□□ -2.05
SSN8YNL025C YBT1P32386 1661 aa2.27□□□□□ -2.05
SSN8YNL025C YSP2Q06681 1438 aa2.26□□□□□ -2.05
SSN8YNL025C ADE6P38972 1358 aaKnown RBP2.26□□□□□ -2.05
SSN8YNL025C INO4P13902 151 aa2.26□□□□□ -2.05
SSN8YNL025C HSP10P38910 106 aa2.26□□□□□ -2.05
SSN8YNL025C YFL012WP43580 148 aa2.26□□□□□ -2.05
SSN8YNL025C KNH1P50112 268 aa2.26□□□□□ -2.05
SSN8YNL025C SOM1Q05676 74 aa2.26□□□□□ -2.05
SSN8YNL025C NMA1Q06178 401 aaKnown RBP2.26□□□□□ -2.05
SSN8YNL025C NAT5Q08689 176 aa2.26□□□□□ -2.05
SSN8YNL025C FEX1Q08913 375 aa2.26□□□□□ -2.05
SSN8YNL025C FEX2Q08991 375 aa2.26□□□□□ -2.05
SSN8YNL025C YDR029WQ12111 104 aa2.26□□□□□ -2.05
SSN8YNL025C YPR013CQ12145 317 aa2.26□□□□□ -2.05
SSN8YNL025C KSH1Q8TGJ3 72 aa2.26□□□□□ -2.05
SSN8YNL025C TY1B-HO13535 1793 aa2.26□□□□□ -2.05
SSN8YNL025C SNF2P22082 1703 aa2.25□□□□□ -2.05
SSN8YNL025C ROM2P51862 1356 aaKnown RBP2.25□□□□□ -2.05
SSN8YNL025C ECM12O13529 151 aa2.25□□□□□ -2.05
SSN8YNL025C MAK31P23059 88 aa2.25□□□□□ -2.05
SSN8YNL025C FMT1P32785 401 aa2.25□□□□□ -2.05
SSN8YNL025C MSL1P40567 111 aaPredicted RBP2.25□□□□□ -2.05
SSN8YNL025C HUR1P45820 110 aa2.25□□□□□ -2.05
SSN8YNL025C CUE4Q04201 117 aaPredicted RBP2.25□□□□□ -2.05
SSN8YNL025C IRC19Q07843 230 aa2.25□□□□□ -2.05
SSN8YNL025C YOR268CQ08734 132 aa2.25□□□□□ -2.05
SSN8YNL025C ATG41Q12048 136 aa2.25□□□□□ -2.05
SSN8YNL025C YOR376W-AQ3E805 51 aa2.25□□□□□ -2.05
SSN8YNL025C PDR12Q02785 1511 aa2.24□□□□□ -2.05
SSN8YNL025C MDM35O60200 86 aa2.24□□□□□ -2.05
SSN8YNL025C RPS23AP0CX29 145 aaKnown RBP2.24□□□□□ -2.05
SSN8YNL025C RPS23BP0CX30 145 aa2.24□□□□□ -2.05
SSN8YNL025C MIG1P27705 504 aa2.24□□□□□ -2.05
SSN8YNL025C PHO88P38264 188 aaPredicted RBP2.24□□□□□ -2.05
SSN8YNL025C YGR269WP40326 108 aa2.24□□□□□ -2.05
SSN8YNL025C RPL33BP41056 107 aaKnown RBP2.24□□□□□ -2.05
SSN8YNL025C RSM19P53733 91 aaPredicted RBP2.24□□□□□ -2.05
SSN8YNL025C MZM1Q03429 123 aaPredicted RBP2.24□□□□□ -2.05
SSN8YNL025C SML1Q04964 104 aa2.24□□□□□ -2.05
SSN8YNL025C MIC10Q96VH5 97 aa2.24□□□□□ -2.05
SSN8YNL025C CDC25P04821 1589 aa2.23□□□□□ -2.05
SSN8YNL025C YLR236CA0A023PZG4 107 aa2.23□□□□□ -2.05
SSN8YNL025C HSP26P15992 214 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
SSN8YNL025C NRG2P38082 220 aa2.23□□□□□ -2.05
SSN8YNL025C YHR180WP38868 163 aa2.23□□□□□ -2.05
SSN8YNL025C HYR1P40581 163 aaKnown RBP2.23□□□□□ -2.05
SSN8YNL025C SMD3P43321 101 aaKnown RBP2.23□□□□□ -2.05
SSN8YNL025C PIR5P46999 287 aa2.23□□□□□ -2.05
SSN8YNL025C CIS3P47001 227 aa2.23□□□□□ -2.05
SSN8YNL025C MIX14Q04341 121 aa2.23□□□□□ -2.05
SSN8YNL025C ELP6Q04868 273 aa2.23□□□□□ -2.05
SSN8YNL025C DAD1Q12248 94 aa2.23□□□□□ -2.05
SSN8YNL025C TY1B-DR3Q99231 1755 aa2.23□□□□□ -2.05
SSN8YNL025C LYS2P07702 1392 aa2.23□□□□□ -2.05
SSN8YNL025C RRP5Q05022 1729 aaKnown RBP2.22□□□□□ -2.05
SSN8YNL025C PAU21P0CE86 164 aa2.22□□□□□ -2.05
SSN8YNL025C PAU22P0CE87 164 aa2.22□□□□□ -2.05
SSN8YNL025C HMRA1P0CY11 126 aa2.22□□□□□ -2.05
SSN8YNL025C FYV5P25585 152 aa2.22□□□□□ -2.05
SSN8YNL025C EMP24P32803 203 aaKnown RBP2.22□□□□□ -2.05
SSN8YNL025C PEP8P40335 379 aa2.22□□□□□ -2.05
SSN8YNL025C EMC5P40540 141 aa2.22□□□□□ -2.05
SSN8YNL025C YPI1P43587 155 aa2.22□□□□□ -2.05
SSN8YNL025C YPL067CQ02754 198 aa2.22□□□□□ -2.05
SSN8YNL025C YDL157CQ12082 118 aa2.22□□□□□ -2.05
SSN8YNL025C SUS1Q6WNK7 96 aa2.22□□□□□ -2.05
SSN8YNL025C RPS25BP0C0T4 108 aaKnown RBP2.21□□□□□ -2.06
SSN8YNL025C CYB5P40312 120 aa2.21□□□□□ -2.06
SSN8YNL025C IML1P47170 1584 aa2.21□□□□□ -2.06
SSN8YNL025C IGO1P53897 168 aa2.21□□□□□ -2.06
SSN8YNL025C DAD4P69851 72 aa2.21□□□□□ -2.06
SSN8YNL025C MET31Q03081 177 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms