RNA–Protein interactions for RNA: YMR164C

MSS11, Transcript of Transcription factor, yeast

Gene MSS11, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS11	YMR164C	YCL012C	Q8J0M4	134 aa		0.88	□□□□□ -2.27
MSS11	YMR164C	NUP192	P47054	1683 aa		0.88	□□□□□ -2.27
MSS11	YMR164C	RPB3	P16370	318 aa	Known RBP	0.87	□□□□□ -2.27
MSS11	YMR164C	CKS1	P20486	150 aa	Known RBP	0.87	□□□□□ -2.27
MSS11	YMR164C	EMP24	P32803	203 aa	Known RBP	0.87	□□□□□ -2.27
MSS11	YMR164C	LSM2	P38203	95 aa	Known RBP	0.87	□□□□□ -2.27
MSS11	YMR164C	YER076C	P40049	302 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	PDR17	P53844	350 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	VPS28	Q02767	242 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	RCE1	Q03530	315 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	SEN15	Q04675	128 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	CNL1	Q06333	122 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	PST2	Q12335	198 aa	Known RBP	0.87	□□□□□ -2.27
MSS11	YMR164C	RIB3	Q99258	208 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	IRA1	P18963	3092 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	RIM15	P43565	1770 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.87	□□□□□ -2.27
MSS11	YMR164C	FIG2	P25653	1609 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	YLR236C	A0A023PZG4	107 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	CDC33	P07260	213 aa	Known RBP	0.87	□□□□□ -2.27
MSS11	YMR164C	TIR1	P10863	254 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	ANB1	P19211	157 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	MAG1	P22134	296 aa	Known RBP	0.87	□□□□□ -2.27
MSS11	YMR164C	STP22	P25604	385 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	TAH1	P25638	111 aa	Predicted RBP	0.87	□□□□□ -2.27
MSS11	YMR164C	THG1	P53215	237 aa	Known RBP	0.87	□□□□□ -2.27
MSS11	YMR164C	LSM7	P53905	115 aa	Known RBP	0.87	□□□□□ -2.27
MSS11	YMR164C	ELC1	Q03071	99 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	AIM34	Q03673	198 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	UPS3	Q04006	179 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	SWC7	Q06707	132 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	RAD28	Q12021	506 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	RDI1	Q12434	202 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	YPR145C-A	Q2V2P0	78 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	YNR034W-A	Q3E841	98 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	YIL134C-A	Q45U18	67 aa		0.87	□□□□□ -2.27
MSS11	YMR164C	VAR1	P02381	398 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	QCR8	P08525	94 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.86	□□□□□ -2.27	not detected
MSS11	YMR164C	TRR1	P29509	319 aa	Known RBP	0.86	□□□□□ -2.27
MSS11	YMR164C	SNC2	P33328	115 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	HPA3	P39979	161 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	FLX1	P40464	311 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	VMA21	P41806	77 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	TIM8	P57744	87 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	GRX5	Q02784	150 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	MAK3	Q03503	176 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	YMR315W	Q04869	349 aa	Known RBP	0.86	□□□□□ -2.27
MSS11	YMR164C	NOC4	Q06512	552 aa	Predicted RBP	0.86	□□□□□ -2.27
MSS11	YMR164C	YOL131W	Q08270	108 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	NAT5	Q08689	176 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	MBF1	O14467	151 aa	Known RBP	0.86	□□□□□ -2.27
MSS11	YMR164C	PAI3	P01094	68 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	RPS25B	P0C0T4	108 aa	Known RBP	0.86	□□□□□ -2.27
MSS11	YMR164C	HYP2	P23301	157 aa	Known RBP	0.86	□□□□□ -2.27
MSS11	YMR164C	MGT1	P26188	188 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	PAN3	P36102	679 aa	Predicted RBP	0.86	□□□□□ -2.27
MSS11	YMR164C	MRPL11	P36521	249 aa	Predicted RBP	0.86	□□□□□ -2.27
MSS11	YMR164C	YBR090C	P38253	122 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	YHR130C	P38834	111 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	GCV3	P39726	170 aa	Predicted RBP	0.86	□□□□□ -2.27
MSS11	YMR164C	PAU15	P40585	124 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	ERJ5	P43613	295 aa	Predicted RBP	0.86	□□□□□ -2.27
MSS11	YMR164C	YNL033W	P53964	284 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	YNL019C	P53975	284 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	YLR460C	P54007	376 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	HPT1	Q04178	221 aa	Known RBP	0.86	□□□□□ -2.27
MSS11	YMR164C	AVO2	Q04749	426 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	PAU23	Q07987	124 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	PAU17	Q12370	124 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	RPS25A	Q3E792	108 aa	Predicted RBP	0.86	□□□□□ -2.27
MSS11	YMR164C	VMA9	Q3E7B6	73 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	MHF1	Q3E835	90 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	SUS1	Q6WNK7	96 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	ATG40	Q99325	256 aa		0.86	□□□□□ -2.27
MSS11	YMR164C	TY4B-J	P47024	1803 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	IRA2	P19158	3079 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	SEC11	P15367	167 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	BET1	P22804	142 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	BUB2	P26448	306 aa	Predicted RBP	0.85	□□□□□ -2.27
MSS11	YMR164C	RPL14B	P38754	138 aa	Known RBP	0.85	□□□□□ -2.27
MSS11	YMR164C	APQ12	P40532	138 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	YJR015W	P47090	510 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	MPC1	P53157	130 aa	Known RBP	0.85	□□□□□ -2.27
MSS11	YMR164C	SAY1	P53324	424 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	HHT1	P61830	136 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	YPR114W	Q06107	315 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	YOL160W	Q08321	113 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	HUT1	Q12520	339 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	KTI11	Q3E840	82 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	MSB2	P32334	1306 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	YER039C-A	P0CD97	72 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	PAU19	P0CE85	124 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	PAU21	P0CE86	164 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	PAU22	P0CE87	164 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	PBI2	P0CT04	75 aa	Known RBP	0.85	□□□□□ -2.27
MSS11	YMR164C	INO4	P13902	151 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	UBC5	P15732	148 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	PHO85	P17157	305 aa		0.85	□□□□□ -2.27
MSS11	YMR164C	PAU3	P25610	124 aa		0.85	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 125.3 ms