RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W LCL2Q08045 131 aa2.06□□□□□ -2.08
YML040WYML040W NAT5Q08689 176 aa2.06□□□□□ -2.08
YML040WYML040W YPL067CQ02754 198 aa2.05□□□□□ -2.08
YML040WYML040W SDH7Q04401 133 aa2.05□□□□□ -2.08
YML040WYML040W NKP2Q06162 153 aa2.05□□□□□ -2.08
YML040WYML040W CCW12Q12127 133 aa2.05□□□□□ -2.08
YML040WYML040W MRP49P32388 137 aa2.04□□□□□ -2.08
YML040WYML040W SFT2P38166 215 aa2.04□□□□□ -2.08
YML040WYML040W SED1Q01589 338 aa2.04□□□□□ -2.08
YML040WYML040W YMR007WQ03675 126 aa2.04□□□□□ -2.08
YML040WYML040W YGL014C-AP0C5N1 53 aa2.03□□□□□ -2.08
YML040WYML040W RPL40AP0CH08 128 aaKnown RBP2.03□□□□□ -2.08
YML040WYML040W RPL40BP0CH09 128 aaKnown RBP2.03□□□□□ -2.08
YML040WYML040W MRPL44P19956 98 aa2.03□□□□□ -2.08
YML040WYML040W RPL33AP05744 107 aaKnown RBP2.02□□□□□ -2.09
YML040WYML040W CDC39P25655 2108 aaKnown RBP2.02□□□□□ -2.09
YML040WYML040W SLH1P53327 1967 aaKnown RBP2.01□□□□□ -2.09
YML040WYML040W NMT1P14743 455 aa2.01□□□□□ -2.09
YML040WYML040W HUA1P40325 198 aa2.01□□□□□ -2.09
YML040WYML040W YAR064WP39563 99 aa2□□□□□ -2.09
YML040WYML040W BRP1P53194 125 aa2□□□□□ -2.09
YML040WYML040W Q0144Q9ZZW2 109 aa2□□□□□ -2.09
YML040WYML040W UTP11P34247 250 aaPredicted RBP1.99□□□□□ -2.09
YML040WYML040W HSP10P38910 106 aa1.99□□□□□ -2.09
YML040WYML040W SAE3P89114 91 aa1.98□□□□□ -2.09
YML040WYML040W YMR122CQ03879 124 aa1.98□□□□□ -2.09
YML040WYML040W YOL013W-AP0C272 63 aaPredicted RBP1.97□□□□□ -2.09
YML040WYML040W YCR001WP25347 104 aa1.97□□□□□ -2.09
YML040WYML040W LST8P41318 303 aa1.97□□□□□ -2.09
YML040WYML040W PRM3Q08931 133 aa1.97□□□□□ -2.09
YML040WYML040W YLR099W-AQ3E798 87 aa1.97□□□□□ -2.09
YML040WYML040W RTC6O14464 93 aa1.96□□□□□ -2.1
YML040WYML040W YHR213WP0CI67 198 aa1.96□□□□□ -2.1
YML040WYML040W HSL1P34244 1518 aa1.96□□□□□ -2.1
YML040WYML040W VMA7P39111 118 aa1.96□□□□□ -2.1
YML040WYML040W GAT4P40569 121 aa1.96□□□□□ -2.1
YML040WYML040W GTT2Q12390 233 aa1.96□□□□□ -2.1
YML040WYML040W WIP1Q2V2P8 89 aa1.96□□□□□ -2.1
YML040WYML040W SLO1Q3E784 85 aa1.96□□□□□ -2.1
YML040WYML040W YOR376W-AQ3E805 51 aa1.96□□□□□ -2.1
YML040WYML040W PAU21P0CE86 164 aa1.95□□□□□ -2.1
YML040WYML040W PAU22P0CE87 164 aa1.95□□□□□ -2.1
YML040WYML040W AIM4P38305 123 aaPredicted RBP1.95□□□□□ -2.1
YML040WYML040W MRPL11P36521 249 aaPredicted RBP1.94□□□□□ -2.1
YML040WYML040W YIL102CP40488 101 aa1.94□□□□□ -2.1
YML040WYML040W HAP3P13434 144 aa1.93□□□□□ -2.1
YML040WYML040W SEC59P20048 519 aa1.93□□□□□ -2.1
YML040WYML040W UGX2P32772 223 aa1.93□□□□□ -2.1
YML040WYML040W RPL37AP49166 88 aaKnown RBP1.93□□□□□ -2.1
YML040WYML040W MPC1P53157 130 aaKnown RBP1.93□□□□□ -2.1
YML040WYML040W ERV14P53173 138 aa1.93□□□□□ -2.1
YML040WYML040W FRQ1Q06389 190 aa1.93□□□□□ -2.1
YML040WYML040W YLR118CQ12354 227 aa1.93□□□□□ -2.1
YML040WYML040W ANB1P19211 157 aa1.92□□□□□ -2.1
YML040WYML040W AIM18P38884 321 aa1.92□□□□□ -2.1
YML040WYML040W YNL122CP53921 115 aaPredicted RBP1.92□□□□□ -2.1
YML040WYML040W COA4Q05809 96 aa1.92□□□□□ -2.1
YML040WYML040W SRL3P36167 246 aa1.91□□□□□ -2.1
YML040WYML040W YLR296WQ05898 108 aa1.91□□□□□ -2.1
YML040WYML040W KTI11Q3E840 82 aa1.91□□□□□ -2.1
YML040WYML040W HAP2P06774 265 aa1.91□□□□□ -2.1
YML040WYML040W YKL044WP36092 106 aa1.9□□□□□ -2.11
YML040WYML040W IRC21Q04772 201 aa1.9□□□□□ -2.11
YML040WYML040W SNT2P53127 1403 aa1.89□□□□□ -2.11
YML040WYML040W ROM2P51862 1356 aaKnown RBP1.89□□□□□ -2.11
YML040WYML040W AIM11P87275 137 aa1.89□□□□□ -2.11
YML040WYML040W AIM36Q03798 255 aa1.89□□□□□ -2.11
YML040WYML040W ADK1P07170 222 aaKnown RBP1.88□□□□□ -2.11
YML040WYML040W RPB11P38902 120 aa1.88□□□□□ -2.11
YML040WYML040W SNF11P38956 169 aa1.88□□□□□ -2.11
YML040WYML040W SPC24Q04477 213 aa1.88□□□□□ -2.11
YML040WYML040W GSC2P40989 1895 aa1.87□□□□□ -2.11
YML040WYML040W GPI19Q04082 140 aa1.87□□□□□ -2.11
YML040WYML040W RPL36BO14455 100 aaKnown RBP1.86□□□□□ -2.11
YML040WYML040W RPL36AP05745 100 aaPredicted RBP1.86□□□□□ -2.11
YML040WYML040W PFY1P07274 126 aa1.86□□□□□ -2.11
YML040WYML040W HHY1P39982 102 aa1.86□□□□□ -2.11
YML040WYML040W LDB18Q07887 179 aa1.86□□□□□ -2.11
YML040WYML040W FCF2Q12035 217 aaPredicted RBP1.86□□□□□ -2.11
YML040WYML040W MYO2P19524 1574 aaKnown RBP1.85□□□□□ -2.11
YML040WYML040W APS2Q00381 147 aa1.85□□□□□ -2.11
YML040WYML040W MGR2Q02889 113 aa1.85□□□□□ -2.11
YML040WYML040W YOR072WQ08486 104 aa1.85□□□□□ -2.11
YML040WYML040W YSF3P0C074 85 aaPredicted RBP1.84□□□□□ -2.12
YML040WYML040W RPS22AP0C0W1 130 aaKnown RBP1.84□□□□□ -2.12
YML040WYML040W YLR194CQ05777 254 aa1.84□□□□□ -2.12
YML040WYML040W YLR042CQ07990 161 aa1.84□□□□□ -2.12
YML040WYML040W RPS22BQ3E7Y3 130 aaKnown RBP1.84□□□□□ -2.12
YML040WYML040W YIL014C-AQ02598 104 aa1.83□□□□□ -2.12
YML040WYML040W HPA2Q06592 156 aa1.83□□□□□ -2.12
YML040WYML040W HFA1P32874 2273 aa1.83□□□□□ -2.12
YML040WYML040W RPO41P13433 1351 aaKnown RBP1.82□□□□□ -2.12
YML040WYML040W GSP1P32835 219 aaKnown RBP1.82□□□□□ -2.12
YML040WYML040W YBR013CP38215 129 aa1.82□□□□□ -2.12
YML040WYML040W YJL009WP47078 108 aa1.82□□□□□ -2.12
YML040WYML040W MIC27P50945 234 aa1.82□□□□□ -2.12
YML040WYML040W PAU12P53343 120 aa1.82□□□□□ -2.12
YML040WYML040W YHR130CP38834 111 aa1.81□□□□□ -2.12
YML040WYML040W YAR029WP39549 74 aa1.81□□□□□ -2.12
YML040WYML040W TDA2P40045 126 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms