RNA–Protein interactions for RNA: YLR176C

RFX1, Transcript of Major transcriptional repressor of DNA-damage-regulated genes, yeastyeast

Gene RFX1, Length 2,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFX1YLR176C SFT2P38166 215 aa0.08□□□□□ -2.4
RFX1YLR176C FIG1P38224 298 aa0.08□□□□□ -2.4
RFX1YLR176C NAT5Q08689 176 aa0.08□□□□□ -2.4
RFX1YLR176C YOR385WQ08909 290 aa0.08□□□□□ -2.4
RFX1YLR176C PET20Q99373 253 aa0.08□□□□□ -2.4
RFX1YLR176C LAA1P39526 2014 aa0.08□□□□□ -2.4
RFX1YLR176C LSM1P47017 172 aaKnown RBP0.08□□□□□ -2.4
RFX1YLR176C MIC27P50945 234 aa0.08□□□□□ -2.4
RFX1YLR176C YPL067CQ02754 198 aa0.08□□□□□ -2.4
RFX1YLR176C RAV2Q03956 351 aa0.07□□□□□ -2.4
RFX1YLR176C SUI1P32911 108 aaKnown RBP0.07□□□□□ -2.4
RFX1YLR176C BRP1P53194 125 aa0.07□□□□□ -2.4
RFX1YLR176C GSC2P40989 1895 aa0.06□□□□□ -2.4
RFX1YLR176C PFY1P07274 126 aa0.06□□□□□ -2.4
RFX1YLR176C YSF3P0C074 85 aaPredicted RBP0.06□□□□□ -2.4
RFX1YLR176C LSM8P47093 109 aaKnown RBP0.06□□□□□ -2.4
RFX1YLR176C PKR1Q03880 122 aaKnown RBP0.05□□□□□ -2.4
RFX1YLR176C YLR194CQ05777 254 aa0.05□□□□□ -2.4
RFX1YLR176C YLR296WQ05898 108 aa0.05□□□□□ -2.4
RFX1YLR176C SNF2P22082 1703 aa0.05□□□□□ -2.4
RFX1YLR176C PET54P10834 293 aa0.05□□□□□ -2.4
RFX1YLR176C MRPL44P19956 98 aa0.05□□□□□ -2.4
RFX1YLR176C RPS1AP33442 255 aaKnown RBP0.05□□□□□ -2.4
RFX1YLR176C SPG1P50088 95 aa0.05□□□□□ -2.4
RFX1YLR176C YGL149WP53116 101 aa0.05□□□□□ -2.4
RFX1YLR176C RTC6O14464 93 aa0.04□□□□□ -2.4
RFX1YLR176C MRPL11P36521 249 aaPredicted RBP0.04□□□□□ -2.4
RFX1YLR176C RPS29BP41058 56 aaKnown RBP0.04□□□□□ -2.4
RFX1YLR176C YDR366CP87287 132 aa0.04□□□□□ -2.4
RFX1YLR176C YMR320WQ04897 101 aa0.04□□□□□ -2.4
RFX1YLR176C YOR1P53049 1477 aa0.04□□□□□ -2.4
RFX1YLR176C TY4B-JP47024 1803 aa0.03□□□□□ -2.4
RFX1YLR176C MRPL31P14063 131 aaPredicted RBP0.03□□□□□ -2.4
RFX1YLR176C QCR10P37299 77 aa0.03□□□□□ -2.4
RFX1YLR176C TLG1Q03322 224 aa0.03□□□□□ -2.4
RFX1YLR176C GTT2Q12390 233 aa0.03□□□□□ -2.41
RFX1YLR176C SNT2P53127 1403 aa0.02□□□□□ -2.41
RFX1YLR176C URA2P07259 2214 aaKnown RBP0.02□□□□□ -2.41
RFX1YLR176C POR2P40478 281 aa0.02□□□□□ -2.41
RFX1YLR176C YPR117WQ06116 2489 aa0.02□□□□□ -2.41
RFX1YLR176C AIM18P38884 321 aa0.02□□□□□ -2.41
RFX1YLR176C MOG1P47123 218 aa0.02□□□□□ -2.41
RFX1YLR176C YJR128WP47162 119 aa0.02□□□□□ -2.41
RFX1YLR176C SDH7Q04401 133 aa0.01□□□□□ -2.41
RFX1YLR176C SPC3Q12133 184 aa0.01□□□□□ -2.41
RFX1YLR176C ATP14Q12349 124 aa0.01□□□□□ -2.41
RFX1YLR176C HAP3P13434 144 aa0.01□□□□□ -2.41
RFX1YLR176C GSP1P32835 219 aaKnown RBP0.01□□□□□ -2.41
RFX1YLR176C SMD2Q06217 110 aaKnown RBP0.01□□□□□ -2.41
RFX1YLR176C LDB18Q07887 179 aa0.01□□□□□ -2.41
RFX1YLR176C MED11Q99278 115 aa0.01□□□□□ -2.41
RFX1YLR176C TY1B-HO13535 1793 aa0□□□□□ -2.41
RFX1YLR176C PAU21P0CE86 164 aa0□□□□□ -2.41
RFX1YLR176C PAU22P0CE87 164 aa0□□□□□ -2.41
RFX1YLR176C CUP1-1P0CX80 61 aa0□□□□□ -2.41
RFX1YLR176C CUP1-2P0CX81 61 aa0□□□□□ -2.41
RFX1YLR176C HHO1P53551 258 aa0□□□□□ -2.41
RFX1YLR176C COF1Q03048 143 aaKnown RBP0□□□□□ -2.41
RFX1YLR176C AUA1P32450 94 aa-0.01□□□□□ -2.41
RFX1YLR176C EMP24P32803 203 aaKnown RBP-0.01□□□□□ -2.41
RFX1YLR176C SRX1P36077 127 aa-0.01□□□□□ -2.41
RFX1YLR176C YRF1-3P0CX14 1859 aa-0.01□□□□□ -2.41
RFX1YLR176C YRF1-7P0CX15 1859 aa-0.01□□□□□ -2.41
RFX1YLR176C YCR050CP25630 102 aa-0.01□□□□□ -2.41
RFX1YLR176C HSP10P38910 106 aa-0.01□□□□□ -2.41
RFX1YLR176C YAL064WP39711 94 aa-0.01□□□□□ -2.41
RFX1YLR176C HPM1P40481 377 aa-0.01□□□□□ -2.41
RFX1YLR176C YGR039WP53225 103 aa-0.01□□□□□ -2.41
RFX1YLR176C PRS3P38689 320 aaKnown RBP-0.02□□□□□ -2.41
RFX1YLR176C YIL163CP40448 117 aa-0.02□□□□□ -2.41
RFX1YLR176C YFR035CP43608 114 aa-0.02□□□□□ -2.41
RFX1YLR176C YGR017WP53210 297 aa-0.02□□□□□ -2.41
RFX1YLR176C FCF2Q12035 217 aaPredicted RBP-0.02□□□□□ -2.41
RFX1YLR176C RBL2P48606 106 aaKnown RBP-0.02□□□□□ -2.41
RFX1YLR176C BLM10P43583 2143 aa-0.02□□□□□ -2.41
RFX1YLR176C BNI1P41832 1953 aa-0.02□□□□□ -2.41
RFX1YLR176C EFM5P53200 248 aaKnown RBP-0.03□□□□□ -2.41
RFX1YLR176C SUA7P29055 345 aaPredicted RBP-0.03□□□□□ -2.41
RFX1YLR176C RPL14AP36105 138 aaKnown RBP-0.03□□□□□ -2.41
RFX1YLR176C RPL14BP38754 138 aaKnown RBP-0.03□□□□□ -2.41
RFX1YLR176C RPL36BO14455 100 aaKnown RBP-0.04□□□□□ -2.42
RFX1YLR176C RPL36AP05745 100 aaPredicted RBP-0.04□□□□□ -2.42
RFX1YLR176C ELC1Q03071 99 aa-0.04□□□□□ -2.42
RFX1YLR176C LCL1Q02786 101 aa-0.05□□□□□ -2.42
RFX1YLR176C RPC19P28000 142 aaKnown RBP-0.05□□□□□ -2.42
RFX1YLR176C ARC19P33204 171 aaKnown RBP-0.05□□□□□ -2.42
RFX1YLR176C YAP3P38749 330 aa-0.05□□□□□ -2.42
RFX1YLR176C ICS3P47034 131 aa-0.05□□□□□ -2.42
RFX1YLR176C ARL3Q02804 198 aa-0.05□□□□□ -2.42
RFX1YLR176C YDR010CQ12426 110 aa-0.05□□□□□ -2.42
RFX1YLR176C OCA6Q12454 224 aa-0.05□□□□□ -2.42
RFX1YLR176C YGR240C-AQ3E786 66 aa-0.05□□□□□ -2.42
RFX1YLR176C ENV10Q99382 181 aa-0.05□□□□□ -2.42
RFX1YLR176C TRS20P38334 175 aa-0.06□□□□□ -2.42
RFX1YLR176C TVP18Q04767 167 aa-0.07□□□□□ -2.42
RFX1YLR176C YEA6P39953 335 aa-0.07□□□□□ -2.42
RFX1YLR176C HPA2Q06592 156 aa-0.07□□□□□ -2.42
RFX1YLR176C TRM732Q03496 1420 aa-0.08□□□□□ -2.42
RFX1YLR176C SEC16P48415 2195 aaKnown RBP-0.08□□□□□ -2.42
RFX1YLR176C PHS1P40857 217 aa-0.08□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms