RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W PHS1P40857 217 aa3.85□□□□□ -1.79
ABF1YKL112W MRPS16Q02608 121 aa3.85□□□□□ -1.79
ABF1YKL112W MSA1Q08471 629 aa3.85□□□□□ -1.79
ABF1YKL112W SWM1Q12379 170 aa3.85□□□□□ -1.79
ABF1YKL112W GLT1Q12680 2145 aaKnown RBP3.85□□□□□ -1.79
ABF1YKL112W POR1P04840 283 aaKnown RBP3.85□□□□□ -1.79
ABF1YKL112W MRP17P28778 131 aa3.85□□□□□ -1.79
ABF1YKL112W SMD1Q02260 146 aaPredicted RBP3.85□□□□□ -1.79
ABF1YKL112W YLR281CQ05863 155 aa3.85□□□□□ -1.79
ABF1YKL112W MDM35O60200 86 aa3.84□□□□□ -1.79
ABF1YKL112W MID2P36027 376 aa3.84□□□□□ -1.79
ABF1YKL112W MIX23P38162 196 aa3.84□□□□□ -1.79
ABF1YKL112W YNL320WP42840 284 aa3.84□□□□□ -1.79
ABF1YKL112W YNL046WP53956 172 aa3.84□□□□□ -1.79
ABF1YKL112W IRC22P40006 225 aa3.83□□□□□ -1.8
ABF1YKL112W TDA4P47153 279 aa3.83□□□□□ -1.8
ABF1YKL112W KNH1P50112 268 aa3.83□□□□□ -1.8
ABF1YKL112W YGL034CP53186 121 aa3.83□□□□□ -1.8
ABF1YKL112W CAX4P53223 239 aa3.83□□□□□ -1.8
ABF1YKL112W YNL234WP53857 426 aa3.83□□□□□ -1.8
ABF1YKL112W GPI19Q04082 140 aa3.83□□□□□ -1.8
ABF1YKL112W POC4Q12245 148 aaPredicted RBP3.83□□□□□ -1.8
ABF1YKL112W AHT1P29589 182 aa3.83□□□□□ -1.8
ABF1YKL112W SDS23P53172 527 aa3.83□□□□□ -1.8
ABF1YKL112W RIM8P53179 542 aa3.83□□□□□ -1.8
ABF1YKL112W YGR018CP53211 109 aa3.83□□□□□ -1.8
ABF1YKL112W HTL1Q9URQ5 78 aa3.83□□□□□ -1.8
ABF1YKL112W BLM10P43583 2143 aa3.82□□□□□ -1.8
ABF1YKL112W YAL064W-BO13512 126 aa3.82□□□□□ -1.8
ABF1YKL112W SPS100P13130 326 aa3.82□□□□□ -1.8
ABF1YKL112W YCR050CP25630 102 aa3.82□□□□□ -1.8
ABF1YKL112W ATX1P38636 73 aa3.82□□□□□ -1.8
ABF1YKL112W YGL088WP53151 121 aa3.82□□□□□ -1.8
ABF1YKL112W YGR050CP53231 118 aa3.82□□□□□ -1.8
ABF1YKL112W YOR376W-AQ3E805 51 aa3.82□□□□□ -1.8
ABF1YKL112W UBC4P15731 148 aa3.82□□□□□ -1.8
ABF1YKL112W PUB1P32588 453 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
ABF1YKL112W PCL5P38794 229 aa3.82□□□□□ -1.8
ABF1YKL112W SIM1P40472 476 aa3.82□□□□□ -1.8
ABF1YKL112W YGL193CP53097 103 aa3.82□□□□□ -1.8
ABF1YKL112W EST3Q03096 181 aa3.82□□□□□ -1.8
ABF1YKL112W SUS1Q6WNK7 96 aa3.82□□□□□ -1.8
ABF1YKL112W ENV10Q99382 181 aa3.82□□□□□ -1.8
ABF1YKL112W RPS13P05756 151 aaKnown RBP3.81□□□□□ -1.8
ABF1YKL112W KRE1P17260 313 aa3.81□□□□□ -1.8
ABF1YKL112W ZRT3P34240 503 aa3.81□□□□□ -1.8
ABF1YKL112W MRPL39P36533 70 aa3.81□□□□□ -1.8
ABF1YKL112W PHO89P38361 574 aa3.81□□□□□ -1.8
ABF1YKL112W YIL086CP40503 102 aa3.81□□□□□ -1.8
ABF1YKL112W EMC5P40540 141 aa3.81□□□□□ -1.8
ABF1YKL112W DSK2P48510 373 aa3.81□□□□□ -1.8
ABF1YKL112W YOR186WQ08560 144 aa3.81□□□□□ -1.8
ABF1YKL112W YDL211CQ12121 372 aa3.81□□□□□ -1.8
ABF1YKL112W YIL169CP40442 995 aa3.8□□□□□ -1.8
ABF1YKL112W URM1P40554 99 aaPredicted RBP3.8□□□□□ -1.8
ABF1YKL112W CUZ1P53899 274 aa3.8□□□□□ -1.8
ABF1YKL112W YAR066WP0CX18 203 aa3.8□□□□□ -1.8
ABF1YKL112W YHR214WP0CX19 203 aa3.8□□□□□ -1.8
ABF1YKL112W YCR099CP25657 155 aa3.8□□□□□ -1.8
ABF1YKL112W RIM2P38127 377 aa3.8□□□□□ -1.8
ABF1YKL112W YHL018WP38744 120 aaPredicted RBP3.8□□□□□ -1.8
ABF1YKL112W YEL028WP39989 153 aa3.8□□□□□ -1.8
ABF1YKL112W EMI1Q04406 187 aa3.8□□□□□ -1.8
ABF1YKL112W MIC10Q96VH5 97 aa3.8□□□□□ -1.8
ABF1YKL112W HSP12P22943 109 aaKnown RBP3.79□□□□□ -1.8
ABF1YKL112W RPP1P38786 293 aa3.79□□□□□ -1.8
ABF1YKL112W DFG10P40526 253 aa3.79□□□□□ -1.8
ABF1YKL112W AVO2Q04749 426 aa3.79□□□□□ -1.8
ABF1YKL112W YDL157CQ12082 118 aa3.79□□□□□ -1.8
ABF1YKL112W YDR119W-AQ2V2P9 66 aa3.79□□□□□ -1.8
ABF1YKL112W RPL15AP05748 204 aaKnown RBP3.79□□□□□ -1.8
ABF1YKL112W RPA12P32529 125 aaKnown RBP3.79□□□□□ -1.8
ABF1YKL112W RPL15BP54780 204 aaPredicted RBP3.79□□□□□ -1.8
ABF1YKL112W YOR292CQ08743 309 aa3.79□□□□□ -1.8
ABF1YKL112W YOL162WP0CF19 215 aa3.78□□□□□ -1.8
ABF1YKL112W PAU15P40585 124 aa3.78□□□□□ -1.8
ABF1YKL112W PCP1P53259 346 aa3.78□□□□□ -1.8
ABF1YKL112W YLR112WQ12130 139 aa3.78□□□□□ -1.8
ABF1YKL112W YPT10P38146 199 aa3.78□□□□□ -1.81
ABF1YKL112W GPI18P38211 433 aa3.78□□□□□ -1.81
ABF1YKL112W SVP26P38869 228 aa3.78□□□□□ -1.81
ABF1YKL112W PET8P38921 284 aa3.78□□□□□ -1.81
ABF1YKL112W YEL073CP39974 107 aa3.78□□□□□ -1.81
ABF1YKL112W NSA2P40078 261 aaKnown RBP3.78□□□□□ -1.81
ABF1YKL112W TES1P41903 349 aaKnown RBP3.78□□□□□ -1.81
ABF1YKL112W DFM1Q12743 341 aaKnown RBP3.78□□□□□ -1.81
ABF1YKL112W SLH1P53327 1967 aaKnown RBP3.77□□□□□ -1.81
ABF1YKL112W NRG2P38082 220 aa3.77□□□□□ -1.81
ABF1YKL112W YIL054WP40524 105 aa3.77□□□□□ -1.81
ABF1YKL112W PIR5P46999 287 aa3.77□□□□□ -1.81
ABF1YKL112W RRT15Q3E811 62 aa3.77□□□□□ -1.81
ABF1YKL112W ATG40Q99325 256 aa3.77□□□□□ -1.81
ABF1YKL112W RPL16AP26784 199 aaKnown RBP3.76□□□□□ -1.81
ABF1YKL112W MRPS9P38120 278 aa3.76□□□□□ -1.81
ABF1YKL112W MPC1P53157 130 aaKnown RBP3.76□□□□□ -1.81
ABF1YKL112W ADD37Q03233 198 aa3.76□□□□□ -1.81
ABF1YKL112W DAD1Q12248 94 aa3.76□□□□□ -1.81
ABF1YKL112W MDH2P22133 377 aa3.76□□□□□ -1.81
ABF1YKL112W YNL200CP40165 246 aaKnown RBP3.76□□□□□ -1.81
ABF1YKL112W YFR035CP43608 114 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms