RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W HYP2P23301 157 aaKnown RBP1.96□□□□□ -2.1
VMA5YKL080W YCR099CP25657 155 aa1.96□□□□□ -2.1
VMA5YKL080W YGL149WP53116 101 aa1.96□□□□□ -2.1
VMA5YKL080W ERV14P53173 138 aa1.96□□□□□ -2.1
VMA5YKL080W YLR042CQ07990 161 aa1.96□□□□□ -2.1
VMA5YKL080W YNL146C-AQ3E7Z1 64 aa1.96□□□□□ -2.1
VMA5YKL080W SPP41P38904 1435 aa1.95□□□□□ -2.1
VMA5YKL080W COX5BP00425 151 aa1.95□□□□□ -2.1
VMA5YKL080W QCR8P08525 94 aa1.95□□□□□ -2.1
VMA5YKL080W GAT4P40569 121 aa1.95□□□□□ -2.1
VMA5YKL080W GPI19Q04082 140 aa1.95□□□□□ -2.1
VMA5YKL080W YHR086W-AQ3E746 53 aa1.95□□□□□ -2.1
VMA5YKL080W ADK1P07170 222 aaKnown RBP1.94□□□□□ -2.1
VMA5YKL080W YBR242WP38331 238 aa1.94□□□□□ -2.1
VMA5YKL080W TRS20P38334 175 aa1.94□□□□□ -2.1
VMA5YKL080W TDA2P40045 126 aa1.94□□□□□ -2.1
VMA5YKL080W PAM16P42949 149 aa1.94□□□□□ -2.1
VMA5YKL080W BAT2P47176 376 aaKnown RBP1.94□□□□□ -2.1
VMA5YKL080W YPL067CQ02754 198 aa1.94□□□□□ -2.1
VMA5YKL080W YMR252CQ04814 134 aa1.94□□□□□ -2.1
VMA5YKL080W ZEO1Q08245 113 aa1.94□□□□□ -2.1
VMA5YKL080W YOR097CQ12274 175 aaPredicted RBP1.94□□□□□ -2.1
VMA5YKL080W RPL36BO14455 100 aaKnown RBP1.93□□□□□ -2.1
VMA5YKL080W RPL36AP05745 100 aaPredicted RBP1.93□□□□□ -2.1
VMA5YKL080W PAU21P0CE86 164 aa1.93□□□□□ -2.1
VMA5YKL080W PAU22P0CE87 164 aa1.93□□□□□ -2.1
VMA5YKL080W FUN14P18411 198 aa1.93□□□□□ -2.1
VMA5YKL080W LHP1P33399 275 aaKnown RBP1.93□□□□□ -2.1
VMA5YKL080W YKL044WP36092 106 aa1.93□□□□□ -2.1
VMA5YKL080W SRL3P36167 246 aa1.93□□□□□ -2.1
VMA5YKL080W MRPL11P36521 249 aaPredicted RBP1.93□□□□□ -2.1
VMA5YKL080W SNF11P38956 169 aa1.93□□□□□ -2.1
VMA5YKL080W DCV1P43595 202 aa1.93□□□□□ -2.1
VMA5YKL080W GSP1P32835 219 aaKnown RBP1.92□□□□□ -2.1
VMA5YKL080W IPT1P38954 527 aa1.92□□□□□ -2.1
VMA5YKL080W VAM10Q08474 114 aa1.92□□□□□ -2.1
VMA5YKL080W HSP150P32478 413 aa1.91□□□□□ -2.1
VMA5YKL080W YFL065CP43539 102 aa1.91□□□□□ -2.1
VMA5YKL080W GTT2Q12390 233 aa1.91□□□□□ -2.1
VMA5YKL080W TAR1Q8TGM6 124 aa1.91□□□□□ -2.1
VMA5YKL080W MED11Q99278 115 aa1.91□□□□□ -2.1
VMA5YKL080W PFY1P07274 126 aa1.9□□□□□ -2.11
VMA5YKL080W FPR1P20081 114 aaKnown RBP1.9□□□□□ -2.11
VMA5YKL080W UTP11P34247 250 aaPredicted RBP1.9□□□□□ -2.11
VMA5YKL080W YAR029WP39549 74 aa1.9□□□□□ -2.11
VMA5YKL080W BRP1P53194 125 aa1.9□□□□□ -2.11
VMA5YKL080W SWC7Q06707 132 aa1.9□□□□□ -2.11
VMA5YKL080W CMC4Q3E7A9 73 aa1.9□□□□□ -2.11
VMA5YKL080W COA3Q3E7B2 85 aa1.9□□□□□ -2.11
VMA5YKL080W FAS1P07149 2051 aaKnown RBP1.9□□□□□ -2.11
VMA5YKL080W MRPL15P36523 253 aa1.89□□□□□ -2.11
VMA5YKL080W YBR027CP38220 110 aa1.89□□□□□ -2.11
VMA5YKL080W YFL051CP43552 160 aa1.89□□□□□ -2.11
VMA5YKL080W GNA1P43577 159 aaPredicted RBP1.89□□□□□ -2.11
VMA5YKL080W YGR164WP53291 111 aa1.89□□□□□ -2.11
VMA5YKL080W HPA2Q06592 156 aa1.89□□□□□ -2.11
VMA5YKL080W SNT2P53127 1403 aa1.89□□□□□ -2.11
VMA5YKL080W VAR1P02381 398 aa1.88□□□□□ -2.11
VMA5YKL080W YER039C-AP0CD97 72 aa1.88□□□□□ -2.11
VMA5YKL080W ATG8P38182 117 aaRIP-Chip data1.88□□□□□ -2.11not detected
VMA5YKL080W AVO2Q04749 426 aa1.88□□□□□ -2.11
VMA5YKL080W IRC21Q04772 201 aa1.88□□□□□ -2.11
VMA5YKL080W YLR296WQ05898 108 aa1.88□□□□□ -2.11
VMA5YKL080W DAD1Q12248 94 aa1.88□□□□□ -2.11
VMA5YKL080W YBR090CP38253 122 aa1.87□□□□□ -2.11
VMA5YKL080W YEL008WP40001 126 aa1.87□□□□□ -2.11
VMA5YKL080W GTT1P40582 234 aa1.87□□□□□ -2.11
VMA5YKL080W VMA21P41806 77 aa1.87□□□□□ -2.11
VMA5YKL080W FIT1Q04433 528 aa1.87□□□□□ -2.11
VMA5YKL080W YLR422WQ06409 1932 aa1.86□□□□□ -2.11
VMA5YKL080W TSC11P40061 1430 aa1.86□□□□□ -2.11
VMA5YKL080W RPL33AP05744 107 aaKnown RBP1.86□□□□□ -2.11
VMA5YKL080W YHR213WP0CI67 198 aa1.86□□□□□ -2.11
VMA5YKL080W YFR035CP43608 114 aa1.86□□□□□ -2.11
VMA5YKL080W SED1Q01589 338 aa1.86□□□□□ -2.11
VMA5YKL080W YPR203WQ08994 102 aa1.86□□□□□ -2.11
VMA5YKL080W YOR376W-AQ3E805 51 aa1.86□□□□□ -2.11
VMA5YKL080W YLR365WQ7LIF2 110 aa1.86□□□□□ -2.11
VMA5YKL080W YPL261CQ08976 102 aa1.85□□□□□ -2.11
VMA5YKL080W OCA6Q12454 224 aa1.85□□□□□ -2.11
VMA5YKL080W HSL1P34244 1518 aa1.85□□□□□ -2.11
VMA5YKL080W SKI3P17883 1432 aaKnown RBP1.84□□□□□ -2.11
VMA5YKL080W AIM18P38884 321 aa1.84□□□□□ -2.11
VMA5YKL080W YMR090WQ04304 227 aaKnown RBP1.84□□□□□ -2.11
VMA5YKL080W YMR103CQ04436 120 aa1.84□□□□□ -2.11
VMA5YKL080W YOR289WQ12012 251 aaPredicted RBP1.84□□□□□ -2.11
VMA5YKL080W COA6Q3E846 104 aa1.84□□□□□ -2.11
VMA5YKL080W OST5Q92316 86 aa1.84□□□□□ -2.11
VMA5YKL080W DUR1,2P32528 1835 aaKnown RBP1.83□□□□□ -2.12
VMA5YKL080W YGL014C-AP0C5N1 53 aa1.83□□□□□ -2.12
VMA5YKL080W YCR101CP25607 182 aa1.83□□□□□ -2.12
VMA5YKL080W LST8P41318 303 aa1.83□□□□□ -2.12
VMA5YKL080W YIL014C-AQ02598 104 aa1.83□□□□□ -2.12
VMA5YKL080W YMR122CQ03879 124 aa1.83□□□□□ -2.12
VMA5YKL080W RTC6O14464 93 aa1.82□□□□□ -2.12
VMA5YKL080W YCL042WP25572 119 aa1.82□□□□□ -2.12
VMA5YKL080W YEA6P39953 335 aa1.82□□□□□ -2.12
VMA5YKL080W HUR1P45820 110 aa1.82□□□□□ -2.12
VMA5YKL080W SNN1P48232 102 aa1.82□□□□□ -2.12
VMA5YKL080W RPL22BP56628 122 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms