RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C BUD25P85052 153 aa2.08□□□□□ -2.08
TCD1YHR003C EST3Q03096 181 aa2.08□□□□□ -2.08
TCD1YHR003C SHH3Q04487 196 aa2.08□□□□□ -2.08
TCD1YHR003C RNH202Q05635 350 aa2.08□□□□□ -2.08
TCD1YHR003C SYM1Q06563 197 aa2.08□□□□□ -2.08
TCD1YHR003C YOR268CQ08734 132 aa2.08□□□□□ -2.08
TCD1YHR003C FSF1Q12029 327 aaKnown RBP2.08□□□□□ -2.08
TCD1YHR003C BOL1Q3E793 110 aa2.08□□□□□ -2.08
TCD1YHR003C YCL001W-BQ96VH2 84 aa2.08□□□□□ -2.08
TCD1YHR003C SAS5Q99314 248 aa2.08□□□□□ -2.08
TCD1YHR003C LAA1P39526 2014 aa2.08□□□□□ -2.08
TCD1YHR003C DDI2P0CH63 225 aa2.07□□□□□ -2.08
TCD1YHR003C DDI3P0CH64 225 aa2.07□□□□□ -2.08
TCD1YHR003C YPT31P38555 223 aaKnown RBP2.07□□□□□ -2.08
TCD1YHR003C RPB11P38902 120 aa2.07□□□□□ -2.08
TCD1YHR003C YEL073CP39974 107 aa2.07□□□□□ -2.08
TCD1YHR003C YEL028WP39989 153 aa2.07□□□□□ -2.08
TCD1YHR003C YER135CP40082 130 aa2.07□□□□□ -2.08
TCD1YHR003C GON7P46984 123 aa2.07□□□□□ -2.08
TCD1YHR003C PAC10P48363 199 aa2.07□□□□□ -2.08
TCD1YHR003C DOC1P53068 250 aa2.07□□□□□ -2.08
TCD1YHR003C ELC1Q03071 99 aa2.07□□□□□ -2.08
TCD1YHR003C YMR253CQ04835 414 aa2.07□□□□□ -2.08
TCD1YHR003C ANT1Q06497 328 aa2.07□□□□□ -2.08
TCD1YHR003C YLR042CQ07990 161 aa2.07□□□□□ -2.08
TCD1YHR003C KTI11Q3E840 82 aa2.07□□□□□ -2.08
TCD1YHR003C MSW1P04803 379 aa2.06□□□□□ -2.08
TCD1YHR003C RPS19AP07280 144 aaKnown RBP2.06□□□□□ -2.08
TCD1YHR003C RPS19BP07281 144 aaPredicted RBP2.06□□□□□ -2.08
TCD1YHR003C MRPS9P38120 278 aa2.06□□□□□ -2.08
TCD1YHR003C RRT1P38192 103 aa2.06□□□□□ -2.08
TCD1YHR003C CUP9P41817 306 aa2.06□□□□□ -2.08
TCD1YHR003C SBH1P52870 82 aa2.06□□□□□ -2.08
TCD1YHR003C MPC3P53311 146 aa2.06□□□□□ -2.08
TCD1YHR003C YMR295CQ03559 197 aa2.06□□□□□ -2.08
TCD1YHR003C YPR063CQ12160 140 aa2.06□□□□□ -2.08
TCD1YHR003C YIL046W-AQ3E7Z4 54 aa2.06□□□□□ -2.08
TCD1YHR003C VAR1P02381 398 aa2.05□□□□□ -2.08
TCD1YHR003C YHR032W-AP0C5N6 59 aa2.05□□□□□ -2.08
TCD1YHR003C GPA2P10823 449 aa2.05□□□□□ -2.08
TCD1YHR003C MRS4P23500 304 aa2.05□□□□□ -2.08
TCD1YHR003C YCL042WP25572 119 aa2.05□□□□□ -2.08
TCD1YHR003C ETR1P38071 380 aa2.05□□□□□ -2.08
TCD1YHR003C PHS1P40857 217 aa2.05□□□□□ -2.08
TCD1YHR003C RRT7Q07829 113 aa2.05□□□□□ -2.08
TCD1YHR003C ATG10Q07879 167 aa2.05□□□□□ -2.08
TCD1YHR003C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
TCD1YHR003C HUT1Q12520 339 aa2.05□□□□□ -2.08
TCD1YHR003C YOR381W-AQ3E804 55 aa2.05□□□□□ -2.08
TCD1YHR003C MDH2P22133 377 aa2.04□□□□□ -2.08
TCD1YHR003C SCM4P32564 187 aa2.04□□□□□ -2.08
TCD1YHR003C YET1P35723 206 aa2.04□□□□□ -2.08
TCD1YHR003C YKR032WP36127 104 aa2.04□□□□□ -2.08
TCD1YHR003C PHO88P38264 188 aaPredicted RBP2.04□□□□□ -2.08
TCD1YHR003C YHR180WP38868 163 aa2.04□□□□□ -2.08
TCD1YHR003C RIO2P40160 425 aaKnown RBP2.04□□□□□ -2.08
TCD1YHR003C SPG1P50088 95 aa2.04□□□□□ -2.08
TCD1YHR003C EMC4P53073 190 aa2.04□□□□□ -2.08
TCD1YHR003C YNR064CP53750 290 aa2.04□□□□□ -2.08
TCD1YHR003C GRX5Q02784 150 aa2.04□□□□□ -2.08
TCD1YHR003C LIP1Q03579 150 aa2.04□□□□□ -2.08
TCD1YHR003C RIF1P29539 1916 aa2.03□□□□□ -2.08
TCD1YHR003C RAS2P01120 322 aaKnown RBP2.03□□□□□ -2.08
TCD1YHR003C YER039C-AP0CD97 72 aa2.03□□□□□ -2.08
TCD1YHR003C YCR050CP25630 102 aa2.03□□□□□ -2.08
TCD1YHR003C YNL217WP40152 326 aa2.03□□□□□ -2.08
TCD1YHR003C MPM1P40364 252 aa2.03□□□□□ -2.08
TCD1YHR003C YFL012WP43580 148 aa2.03□□□□□ -2.08
TCD1YHR003C SCS22Q6Q595 175 aa2.03□□□□□ -2.08
TCD1YHR003C ATG40Q99325 256 aa2.03□□□□□ -2.08
TCD1YHR003C YOL162WP0CF19 215 aa2.02□□□□□ -2.09
TCD1YHR003C FZF1P32805 299 aa2.02□□□□□ -2.09
TCD1YHR003C PAM17P36147 197 aa2.02□□□□□ -2.09
TCD1YHR003C SFT2P38166 215 aa2.02□□□□□ -2.09
TCD1YHR003C LSM8P47093 109 aaKnown RBP2.02□□□□□ -2.09
TCD1YHR003C DAD3P69850 94 aa2.02□□□□□ -2.09
TCD1YHR003C RIM9Q04734 239 aa2.02□□□□□ -2.09
TCD1YHR003C CSI2Q08054 341 aa2.02□□□□□ -2.09
TCD1YHR003C YOR062CP36025 268 aa2.01□□□□□ -2.09
TCD1YHR003C GAA1P39012 614 aa2.01□□□□□ -2.09
TCD1YHR003C YAR029WP39549 74 aa2.01□□□□□ -2.09
TCD1YHR003C PIR5P46999 287 aa2.01□□□□□ -2.09
TCD1YHR003C YGL230CP53074 147 aa2.01□□□□□ -2.09
TCD1YHR003C IRC23Q08416 157 aa2.01□□□□□ -2.09
TCD1YHR003C YOR015WQ12169 119 aa2.01□□□□□ -2.09
TCD1YHR003C RTR2Q12378 196 aa2.01□□□□□ -2.09
TCD1YHR003C OCA6Q12454 224 aa2.01□□□□□ -2.09
TCD1YHR003C DDP1Q99321 188 aaKnown RBP2.01□□□□□ -2.09
TCD1YHR003C RPS23AP0CX29 145 aaKnown RBP2□□□□□ -2.09
TCD1YHR003C RPS23BP0CX30 145 aa2□□□□□ -2.09
TCD1YHR003C MIG1P27705 504 aa2□□□□□ -2.09
TCD1YHR003C TMA19P35691 167 aaKnown RBP2□□□□□ -2.09
TCD1YHR003C YBR209WP38311 105 aa2□□□□□ -2.09
TCD1YHR003C YHL042WP38729 150 aa2□□□□□ -2.09
TCD1YHR003C YAL064WP39711 94 aa2□□□□□ -2.09
TCD1YHR003C FLX1P40464 311 aa2□□□□□ -2.09
TCD1YHR003C GAT4P40569 121 aa2□□□□□ -2.09
TCD1YHR003C YIR035CP40579 254 aa2□□□□□ -2.09
TCD1YHR003C RPL33BP41056 107 aaKnown RBP2□□□□□ -2.09
TCD1YHR003C PAM16P42949 149 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms