RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C NAT5Q08689 176 aa2.37□□□□□ -2.03
SPB4YFL002C YNL146C-AQ3E7Z1 64 aa2.37□□□□□ -2.03
SPB4YFL002C TAR1Q8TGM6 124 aa2.37□□□□□ -2.03
SPB4YFL002C NMT1P14743 455 aa2.36□□□□□ -2.03
SPB4YFL002C ANB1P19211 157 aa2.36□□□□□ -2.03
SPB4YFL002C YGL010WP25338 174 aa2.35□□□□□ -2.03
SPB4YFL002C ECM31P38122 312 aa2.35□□□□□ -2.03
SPB4YFL002C YOR376W-AQ3E805 51 aa2.35□□□□□ -2.03
SPB4YFL002C HSL1P34244 1518 aa2.35□□□□□ -2.03
SPB4YFL002C RGI1P40043 161 aaPredicted RBP2.34□□□□□ -2.03
SPB4YFL002C YGL149WP53116 101 aa2.33□□□□□ -2.04
SPB4YFL002C FUN14P18411 198 aa2.33□□□□□ -2.04
SPB4YFL002C SEC59P20048 519 aa2.33□□□□□ -2.04
SPB4YFL002C SRL3P36167 246 aa2.33□□□□□ -2.04
SPB4YFL002C HSP10P38910 106 aa2.33□□□□□ -2.04
SPB4YFL002C DCV1P43595 202 aa2.33□□□□□ -2.04
SPB4YFL002C YGL230CP53074 147 aa2.33□□□□□ -2.04
SPB4YFL002C ERV14P53173 138 aa2.33□□□□□ -2.04
SPB4YFL002C YKL044WP36092 106 aa2.32□□□□□ -2.04
SPB4YFL002C YOR097CQ12274 175 aaPredicted RBP2.32□□□□□ -2.04
SPB4YFL002C COA3Q3E7B2 85 aa2.32□□□□□ -2.04
SPB4YFL002C SPP41P38904 1435 aa2.32□□□□□ -2.04
SPB4YFL002C MDS3P53094 1487 aa2.32□□□□□ -2.04
SPB4YFL002C YER039C-AP0CD97 72 aa2.31□□□□□ -2.04
SPB4YFL002C GSP1P32835 219 aaKnown RBP2.31□□□□□ -2.04
SPB4YFL002C YBR242WP38331 238 aa2.31□□□□□ -2.04
SPB4YFL002C YAR029WP39549 74 aa2.31□□□□□ -2.04
SPB4YFL002C YFL065CP43539 102 aa2.31□□□□□ -2.04
SPB4YFL002C BRP1P53194 125 aa2.31□□□□□ -2.04
SPB4YFL002C YPL067CQ02754 198 aa2.31□□□□□ -2.04
SPB4YFL002C GTT2Q12390 233 aa2.31□□□□□ -2.04
SPB4YFL002C MHF1Q3E835 90 aa2.31□□□□□ -2.04
SPB4YFL002C PAU21P0CE86 164 aa2.31□□□□□ -2.04
SPB4YFL002C PAU22P0CE87 164 aa2.31□□□□□ -2.04
SPB4YFL002C PRE1P22141 198 aaKnown RBP2.31□□□□□ -2.04
SPB4YFL002C SNF11P38956 169 aa2.31□□□□□ -2.04
SPB4YFL002C PAM16P42949 149 aa2.31□□□□□ -2.04
SPB4YFL002C RTR2Q12378 196 aa2.31□□□□□ -2.04
SPB4YFL002C YCL042WP25572 119 aa2.3□□□□□ -2.04
SPB4YFL002C YFL051CP43552 160 aa2.3□□□□□ -2.04
SPB4YFL002C RPS12P48589 143 aaKnown RBP2.3□□□□□ -2.04
SPB4YFL002C YCR099CP25657 155 aa2.29□□□□□ -2.04
SPB4YFL002C BAT2P47176 376 aaKnown RBP2.29□□□□□ -2.04
SPB4YFL002C SNT2P53127 1403 aa2.29□□□□□ -2.04
SPB4YFL002C HYP2P23301 157 aaKnown RBP2.28□□□□□ -2.04
SPB4YFL002C HAP3P13434 144 aa2.28□□□□□ -2.04
SPB4YFL002C FPR1P20081 114 aaKnown RBP2.28□□□□□ -2.04
SPB4YFL002C GPI19Q04082 140 aa2.28□□□□□ -2.04
SPB4YFL002C FYV7Q12247 151 aa2.28□□□□□ -2.04
SPB4YFL002C YBR027CP38220 110 aa2.27□□□□□ -2.05
SPB4YFL002C YFR035CP43608 114 aa2.27□□□□□ -2.05
SPB4YFL002C ATG8P38182 117 aaRIP-Chip data2.26□□□□□ -2.05not detected
SPB4YFL002C TDA2P40045 126 aa2.26□□□□□ -2.05
SPB4YFL002C MRPL11P36521 249 aaPredicted RBP2.26□□□□□ -2.05
SPB4YFL002C MRPL15P36523 253 aa2.25□□□□□ -2.05
SPB4YFL002C CYR1P08678 2026 aaKnown RBP2.24□□□□□ -2.05
SPB4YFL002C IGO1P53897 168 aa2.24□□□□□ -2.05
SPB4YFL002C FIT1Q04433 528 aa2.24□□□□□ -2.05
SPB4YFL002C VAM10Q08474 114 aa2.24□□□□□ -2.05
SPB4YFL002C RTC6O14464 93 aa2.24□□□□□ -2.05
SPB4YFL002C YGL014C-AP0C5N1 53 aa2.24□□□□□ -2.05
SPB4YFL002C YPR203WQ08994 102 aa2.24□□□□□ -2.05
SPB4YFL002C VAR1P02381 398 aa2.23□□□□□ -2.05
SPB4YFL002C RPL40AP0CH08 128 aaKnown RBP2.23□□□□□ -2.05
SPB4YFL002C RPL40BP0CH09 128 aaKnown RBP2.23□□□□□ -2.05
SPB4YFL002C SED1Q01589 338 aa2.23□□□□□ -2.05
SPB4YFL002C YPL225WQ08971 146 aaKnown RBP2.23□□□□□ -2.05
SPB4YFL002C OCA6Q12454 224 aa2.23□□□□□ -2.05
SPB4YFL002C RPL36BO14455 100 aaKnown RBP2.22□□□□□ -2.05
SPB4YFL002C RPL33AP05744 107 aaKnown RBP2.22□□□□□ -2.05
SPB4YFL002C RPL36AP05745 100 aaPredicted RBP2.22□□□□□ -2.05
SPB4YFL002C YHR213WP0CI67 198 aa2.22□□□□□ -2.05
SPB4YFL002C AIM18P38884 321 aa2.22□□□□□ -2.05
SPB4YFL002C YLR296WQ05898 108 aa2.22□□□□□ -2.05
SPB4YFL002C TSC11P40061 1430 aa2.22□□□□□ -2.05
SPB4YFL002C YCR101CP25607 182 aa2.21□□□□□ -2.05
SPB4YFL002C EMP24P32803 203 aaKnown RBP2.21□□□□□ -2.05
SPB4YFL002C UTP11P34247 250 aaPredicted RBP2.21□□□□□ -2.05
SPB4YFL002C RIF1P29539 1916 aa2.21□□□□□ -2.06
SPB4YFL002C YHR130CP38834 111 aa2.21□□□□□ -2.06
SPB4YFL002C GNA1P43577 159 aaPredicted RBP2.21□□□□□ -2.06
SPB4YFL002C SEN15Q04675 128 aa2.21□□□□□ -2.06
SPB4YFL002C MED11Q99278 115 aa2.21□□□□□ -2.06
SPB4YFL002C LST8P41318 303 aa2.2□□□□□ -2.06
SPB4YFL002C YGR164WP53291 111 aa2.2□□□□□ -2.06
SPB4YFL002C YLR365WQ7LIF2 110 aa2.2□□□□□ -2.06
SPB4YFL002C CDC39P25655 2108 aaKnown RBP2.2□□□□□ -2.06
SPB4YFL002C AQY2P0CD90 149 aa2.19□□□□□ -2.06
SPB4YFL002C YHL037CP38733 133 aa2.19□□□□□ -2.06
SPB4YFL002C PAU12P53343 120 aa2.19□□□□□ -2.06
SPB4YFL002C YMR122CQ03879 124 aa2.19□□□□□ -2.06
SPB4YFL002C YPL261CQ08976 102 aa2.19□□□□□ -2.06
SPB4YFL002C TRM732Q03496 1420 aa2.19□□□□□ -2.06
SPB4YFL002C HAP2P06774 265 aa2.18□□□□□ -2.06
SPB4YFL002C PFY1P07274 126 aa2.18□□□□□ -2.06
SPB4YFL002C YHR212W-AP0CX91 67 aa2.18□□□□□ -2.06
SPB4YFL002C YBR090CP38253 122 aa2.18□□□□□ -2.06
SPB4YFL002C YIL014C-AQ02598 104 aa2.18□□□□□ -2.06
SPB4YFL002C YMR103CQ04436 120 aa2.18□□□□□ -2.06
SPB4YFL002C HPA2Q06592 156 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms