RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C YNL200CP40165 246 aaKnown RBP0.71□□□□□ -2.3
SWI4YER111C EST3Q03096 181 aa0.71□□□□□ -2.3
SWI4YER111C FCY1Q12178 158 aa0.71□□□□□ -2.3
SWI4YER111C UBC8P28263 218 aa0.7□□□□□ -2.3
SWI4YER111C CIN5P40917 295 aa0.7□□□□□ -2.3
SWI4YER111C YDR366CP87287 132 aa0.7□□□□□ -2.3
SWI4YER111C RCE1Q03530 315 aa0.7□□□□□ -2.3
SWI4YER111C YML079WQ03629 201 aa0.7□□□□□ -2.3
SWI4YER111C YPD1Q07688 167 aa0.7□□□□□ -2.3
SWI4YER111C PST2Q12335 198 aaKnown RBP0.7□□□□□ -2.3
SWI4YER111C PHO13P19881 312 aa0.7□□□□□ -2.3
SWI4YER111C SUI1P32911 108 aaKnown RBP0.7□□□□□ -2.3
SWI4YER111C MRPL24P36525 258 aaPredicted RBP0.7□□□□□ -2.3
SWI4YER111C YER181CP40097 107 aa0.7□□□□□ -2.3
SWI4YER111C NSE4P43124 402 aa0.7□□□□□ -2.3
SWI4YER111C COF1Q03048 143 aaKnown RBP0.7□□□□□ -2.3
SWI4YER111C DML1Q03652 475 aa0.7□□□□□ -2.3
SWI4YER111C MLP1Q02455 1875 aaKnown RBP0.7□□□□□ -2.3
SWI4YER111C HYR1P40581 163 aaKnown RBP0.7□□□□□ -2.3
SWI4YER111C PHB1P40961 287 aa0.7□□□□□ -2.3
SWI4YER111C ALB1P47019 175 aaPredicted RBP0.7□□□□□ -2.3
SWI4YER111C THG1P53215 237 aaKnown RBP0.7□□□□□ -2.3
SWI4YER111C YLR162WQ06235 118 aa0.7□□□□□ -2.3
SWI4YER111C RPL13BP40212 199 aaKnown RBP0.69□□□□□ -2.3
SWI4YER111C RBL2P48606 106 aaKnown RBP0.69□□□□□ -2.3
SWI4YER111C GEP7P53171 287 aa0.69□□□□□ -2.3
SWI4YER111C UBC7Q02159 165 aa0.69□□□□□ -2.3
SWI4YER111C FMN1Q03778 218 aa0.69□□□□□ -2.3
SWI4YER111C YHP1Q04116 353 aa0.69□□□□□ -2.3
SWI4YER111C ELP6Q04868 273 aa0.69□□□□□ -2.3
SWI4YER111C YMR320WQ04897 101 aa0.69□□□□□ -2.3
SWI4YER111C YPR114WQ06107 315 aa0.69□□□□□ -2.3
SWI4YER111C SPC3Q12133 184 aa0.69□□□□□ -2.3
SWI4YER111C RPL13AQ12690 199 aaPredicted RBP0.69□□□□□ -2.3
SWI4YER111C YLR361C-AQ3E795 98 aa0.69□□□□□ -2.3
SWI4YER111C YNL146C-AQ3E7Z1 64 aa0.69□□□□□ -2.3
SWI4YER111C YOR381W-AQ3E804 55 aa0.69□□□□□ -2.3
SWI4YER111C SPS2P08459 502 aa0.69□□□□□ -2.3
SWI4YER111C ACP1P32463 125 aa0.69□□□□□ -2.3
SWI4YER111C YGR269WP40326 108 aa0.69□□□□□ -2.3
SWI4YER111C SPG1P50088 95 aa0.69□□□□□ -2.3
SWI4YER111C YGR039WP53225 103 aa0.69□□□□□ -2.3
SWI4YER111C DAD4P69851 72 aa0.69□□□□□ -2.3
SWI4YER111C KEI1Q06346 221 aa0.69□□□□□ -2.3
SWI4YER111C YMR030W-AQ3E760 96 aa0.69□□□□□ -2.3
SWI4YER111C UBR1P19812 1950 aa0.69□□□□□ -2.3
SWI4YER111C SUA7P29055 345 aaPredicted RBP0.69□□□□□ -2.3
SWI4YER111C AHT1P29589 182 aa0.69□□□□□ -2.3
SWI4YER111C BAT2P47176 376 aaKnown RBP0.69□□□□□ -2.3
SWI4YER111C ATG10Q07879 167 aa0.69□□□□□ -2.3
SWI4YER111C NHP6AP11632 93 aaKnown RBP0.68□□□□□ -2.3
SWI4YER111C PHO85P17157 305 aa0.68□□□□□ -2.3
SWI4YER111C FPR1P20081 114 aaKnown RBP0.68□□□□□ -2.3
SWI4YER111C YCL042WP25572 119 aa0.68□□□□□ -2.3
SWI4YER111C RPB7P34087 171 aa0.68□□□□□ -2.3
SWI4YER111C YDR102CQ03864 110 aa0.68□□□□□ -2.3
SWI4YER111C AVO2Q04749 426 aa0.68□□□□□ -2.3
SWI4YER111C YDL241WQ07738 123 aa0.68□□□□□ -2.3
SWI4YER111C RFU1Q08003 200 aa0.68□□□□□ -2.3
SWI4YER111C HSP12P22943 109 aaKnown RBP0.68□□□□□ -2.3
SWI4YER111C HSP150P32478 413 aa0.68□□□□□ -2.3
SWI4YER111C YRA2P36036 203 aaKnown RBP RIP-Chip data0.68□□□□□ -2.3not detected
SWI4YER111C SHB17P36136 271 aaKnown RBP0.68□□□□□ -2.3
SWI4YER111C YPT31P38555 223 aaKnown RBP0.68□□□□□ -2.3
SWI4YER111C RPS20P38701 121 aaKnown RBP0.68□□□□□ -2.3
SWI4YER111C YHR140WP38842 239 aa0.68□□□□□ -2.3
SWI4YER111C PAC10P48363 199 aa0.68□□□□□ -2.3
SWI4YER111C RCF2P53721 224 aa0.68□□□□□ -2.3
SWI4YER111C ATP19P81451 68 aa0.68□□□□□ -2.3
SWI4YER111C YGL010WP25338 174 aa0.67□□□□□ -2.3
SWI4YER111C CCS1P40202 249 aaKnown RBP0.67□□□□□ -2.3
SWI4YER111C EMC4P53073 190 aa0.67□□□□□ -2.3
SWI4YER111C YPR153WQ06537 140 aa0.67□□□□□ -2.3
SWI4YER111C YNL277W-AQ3E7Z0 62 aa0.67□□□□□ -2.3
SWI4YER111C RPS25BP0C0T4 108 aaKnown RBP0.67□□□□□ -2.3
SWI4YER111C YBL010CP32788 280 aa0.67□□□□□ -2.3
SWI4YER111C HPA3P39979 161 aa0.67□□□□□ -2.3
SWI4YER111C YOR097CQ12274 175 aaPredicted RBP0.67□□□□□ -2.3
SWI4YER111C RPS25AQ3E792 108 aaPredicted RBP0.67□□□□□ -2.3
SWI4YER111C DDP1Q99321 188 aaKnown RBP0.67□□□□□ -2.3
SWI4YER111C MRS4P23500 304 aa0.67□□□□□ -2.3
SWI4YER111C PRS3P38689 320 aaKnown RBP0.67□□□□□ -2.3
SWI4YER111C YEL014CP39999 101 aa0.67□□□□□ -2.3
SWI4YER111C CSN9Q03981 162 aa0.67□□□□□ -2.3
SWI4YER111C RAF1Q06891 181 aa0.67□□□□□ -2.3
SWI4YER111C SLO1Q3E784 85 aa0.67□□□□□ -2.3
SWI4YER111C RPO41P13433 1351 aaKnown RBP0.66□□□□□ -2.3
SWI4YER111C STT4P37297 1900 aa0.66□□□□□ -2.3
SWI4YER111C CYR1P08678 2026 aaKnown RBP0.66□□□□□ -2.3
SWI4YER111C PRE1P22141 198 aaKnown RBP0.66□□□□□ -2.3
SWI4YER111C MAK31P23059 88 aa0.66□□□□□ -2.3
SWI4YER111C MPM1P40364 252 aa0.66□□□□□ -2.3
SWI4YER111C YNL019CP53975 284 aa0.66□□□□□ -2.3
SWI4YER111C CWC27Q02770 301 aa0.66□□□□□ -2.3
SWI4YER111C FLX1P40464 311 aa0.66□□□□□ -2.3
SWI4YER111C NMA1Q06178 401 aaKnown RBP0.66□□□□□ -2.3
SWI4YER111C IRC19Q07843 230 aa0.66□□□□□ -2.3
SWI4YER111C DDR48P18899 430 aaKnown RBP0.65□□□□□ -2.3
SWI4YER111C FMP49A0A023PZB3 126 aa0.65□□□□□ -2.31
SWI4YER111C ETR1P38071 380 aa0.65□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 125.3 ms