RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W HSP150P32478 413 aa2.9□□□□□ -1.95
UBC6YER100W YGL149WP53116 101 aa2.9□□□□□ -1.95
UBC6YER100W AIM36Q03798 255 aa2.9□□□□□ -1.95
UBC6YER100W MHF1Q3E835 90 aa2.9□□□□□ -1.95
UBC6YER100W KIN28P06242 306 aa2.89□□□□□ -1.95
UBC6YER100W MYO2P19524 1574 aaKnown RBP2.89□□□□□ -1.95
UBC6YER100W PRE1P22141 198 aaKnown RBP2.89□□□□□ -1.95
UBC6YER100W HSP10P38910 106 aa2.89□□□□□ -1.95
UBC6YER100W GAT4P40569 121 aa2.89□□□□□ -1.95
UBC6YER100W ANB1P19211 157 aa2.88□□□□□ -1.95
UBC6YER100W FPR1P20081 114 aaKnown RBP2.88□□□□□ -1.95
UBC6YER100W FUN14P18411 198 aa2.87□□□□□ -1.95
UBC6YER100W YLR042CQ07990 161 aa2.87□□□□□ -1.95
UBC6YER100W ERV14P53173 138 aa2.86□□□□□ -1.95
UBC6YER100W YPL067CQ02754 198 aa2.86□□□□□ -1.95
UBC6YER100W KTI11Q3E840 82 aa2.86□□□□□ -1.95
UBC6YER100W NMT1P14743 455 aa2.85□□□□□ -1.95
UBC6YER100W SEC59P20048 519 aa2.85□□□□□ -1.95
UBC6YER100W HYP2P23301 157 aaKnown RBP2.85□□□□□ -1.95
UBC6YER100W MRPL15P36523 253 aa2.85□□□□□ -1.95
UBC6YER100W ATG8P38182 117 aaRIP-Chip data2.85□□□□□ -1.95not detected
UBC6YER100W DCV1P43595 202 aa2.85□□□□□ -1.95
UBC6YER100W BAT2P47176 376 aaKnown RBP2.85□□□□□ -1.95
UBC6YER100W YOR376W-AQ3E805 51 aa2.85□□□□□ -1.95
UBC6YER100W UBR1P19812 1950 aa2.84□□□□□ -1.95
UBC6YER100W YCL042WP25572 119 aa2.84□□□□□ -1.95
UBC6YER100W LHP1P33399 275 aaKnown RBP2.84□□□□□ -1.95
UBC6YER100W YER137CP40083 148 aaKnown RBP2.84□□□□□ -1.95
UBC6YER100W HAP3P13434 144 aa2.83□□□□□ -1.96
UBC6YER100W YKL044WP36092 106 aa2.83□□□□□ -1.96
UBC6YER100W SNF11P38956 169 aa2.83□□□□□ -1.96
UBC6YER100W YPR203WQ08994 102 aa2.83□□□□□ -1.96
UBC6YER100W PAU21P0CE86 164 aa2.82□□□□□ -1.96
UBC6YER100W PAU22P0CE87 164 aa2.82□□□□□ -1.96
UBC6YER100W YBR027CP38220 110 aa2.82□□□□□ -1.96
UBC6YER100W YFL051CP43552 160 aa2.82□□□□□ -1.96
UBC6YER100W RTR2Q12378 196 aa2.82□□□□□ -1.96
UBC6YER100W YAR029WP39549 74 aa2.81□□□□□ -1.96
UBC6YER100W TDA2P40045 126 aa2.81□□□□□ -1.96
UBC6YER100W BRP1P53194 125 aa2.81□□□□□ -1.96
UBC6YER100W FIT1Q04433 528 aa2.81□□□□□ -1.96
UBC6YER100W HSL1P34244 1518 aa2.8□□□□□ -1.96
UBC6YER100W SPP41P38904 1435 aa2.79□□□□□ -1.96
UBC6YER100W SRL3P36167 246 aa2.79□□□□□ -1.96
UBC6YER100W RGI1P40043 161 aaPredicted RBP2.79□□□□□ -1.96
UBC6YER100W PAM16P42949 149 aa2.79□□□□□ -1.96
UBC6YER100W YOR097CQ12274 175 aaPredicted RBP2.79□□□□□ -1.96
UBC6YER100W GTT2Q12390 233 aa2.79□□□□□ -1.96
UBC6YER100W UTP11P34247 250 aaPredicted RBP2.78□□□□□ -1.96
UBC6YER100W MRPL11P36521 249 aaPredicted RBP2.78□□□□□ -1.96
UBC6YER100W GPI19Q04082 140 aa2.78□□□□□ -1.96
UBC6YER100W VAM10Q08474 114 aa2.78□□□□□ -1.96
UBC6YER100W YCR099CP25657 155 aa2.77□□□□□ -1.97
UBC6YER100W SEN15Q04675 128 aa2.77□□□□□ -1.97
UBC6YER100W RPL33AP05744 107 aaKnown RBP2.76□□□□□ -1.97
UBC6YER100W AQY2P0CD90 149 aa2.76□□□□□ -1.97
UBC6YER100W RPL40AP0CH08 128 aaKnown RBP2.76□□□□□ -1.97
UBC6YER100W RPL40BP0CH09 128 aaKnown RBP2.76□□□□□ -1.97
UBC6YER100W MDS3P53094 1487 aa2.76□□□□□ -1.97
UBC6YER100W YGL014C-AP0C5N1 53 aa2.75□□□□□ -1.97
UBC6YER100W YER039C-AP0CD97 72 aa2.75□□□□□ -1.97
UBC6YER100W SED1Q01589 338 aa2.75□□□□□ -1.97
UBC6YER100W RPL36BO14455 100 aaKnown RBP2.74□□□□□ -1.97
UBC6YER100W RPL36AP05745 100 aaPredicted RBP2.74□□□□□ -1.97
UBC6YER100W RPS12P48589 143 aaKnown RBP2.74□□□□□ -1.97
UBC6YER100W YLR296WQ05898 108 aa2.74□□□□□ -1.97
UBC6YER100W FYV7Q12247 151 aa2.74□□□□□ -1.97
UBC6YER100W YHR213WP0CI67 198 aa2.73□□□□□ -1.97
UBC6YER100W YHL037CP38733 133 aa2.73□□□□□ -1.97
UBC6YER100W YFR035CP43608 114 aa2.73□□□□□ -1.97
UBC6YER100W YHR212W-AP0CX91 67 aa2.72□□□□□ -1.97
UBC6YER100W AIM18P38884 321 aa2.72□□□□□ -1.97
UBC6YER100W HPA2Q06592 156 aa2.72□□□□□ -1.97
UBC6YER100W RTC6O14464 93 aa2.71□□□□□ -1.98
UBC6YER100W YMR122CQ03879 124 aa2.71□□□□□ -1.98
UBC6YER100W CYR1P08678 2026 aaKnown RBP2.71□□□□□ -1.98
UBC6YER100W GSP1P32835 219 aaKnown RBP2.7□□□□□ -1.98
UBC6YER100W LST8P41318 303 aa2.7□□□□□ -1.98
UBC6YER100W SNT2P53127 1403 aa2.69□□□□□ -1.98
UBC6YER100W PFY1P07274 126 aa2.69□□□□□ -1.98
UBC6YER100W YHR130CP38834 111 aa2.69□□□□□ -1.98
UBC6YER100W TRM732Q03496 1420 aa2.68□□□□□ -1.98
UBC6YER100W VAR1P02381 398 aa2.68□□□□□ -1.98
UBC6YER100W PRM3Q08931 133 aa2.67□□□□□ -1.98
UBC6YER100W YPL261CQ08976 102 aa2.67□□□□□ -1.98
UBC6YER100W MED11Q99278 115 aa2.67□□□□□ -1.98
UBC6YER100W GNA1P43577 159 aaPredicted RBP2.66□□□□□ -1.98
UBC6YER100W PAU12P53343 120 aa2.66□□□□□ -1.98
UBC6YER100W YIL014C-AQ02598 104 aa2.66□□□□□ -1.98
UBC6YER100W IRC21Q04772 201 aa2.66□□□□□ -1.98
UBC6YER100W YLR194CQ05777 254 aa2.66□□□□□ -1.98
UBC6YER100W YPL225WQ08971 146 aaKnown RBP2.66□□□□□ -1.98
UBC6YER100W DAD1Q12248 94 aa2.66□□□□□ -1.98
UBC6YER100W OCA6Q12454 224 aa2.66□□□□□ -1.98
UBC6YER100W YLR365WQ7LIF2 110 aa2.66□□□□□ -1.98
UBC6YER100W EMP24P32803 203 aaKnown RBP2.65□□□□□ -1.99
UBC6YER100W COA4Q05809 96 aa2.65□□□□□ -1.99
UBC6YER100W OST5Q92316 86 aa2.65□□□□□ -1.99
UBC6YER100W RIF1P29539 1916 aa2.65□□□□□ -1.99
UBC6YER100W AIM4P38305 123 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms