RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W YGR201CP42936 225 aa0.36□□□□□ -2.35
VPS52YDR484W SOM1Q05676 74 aa0.36□□□□□ -2.35
VPS52YDR484W FIT3Q08907 204 aa0.36□□□□□ -2.35
VPS52YDR484W GSC2P40989 1895 aa0.35□□□□□ -2.35
VPS52YDR484W DDP1Q99321 188 aaKnown RBP0.35□□□□□ -2.35
VPS52YDR484W URA2P07259 2214 aaKnown RBP0.35□□□□□ -2.35
VPS52YDR484W LSM1P47017 172 aaKnown RBP0.34□□□□□ -2.35
VPS52YDR484W LSM8P47093 109 aaKnown RBP0.34□□□□□ -2.35
VPS52YDR484W SFT2P38166 215 aa0.34□□□□□ -2.36
VPS52YDR484W AIM4P38305 123 aaPredicted RBP0.34□□□□□ -2.36
VPS52YDR484W MOG1P47123 218 aa0.34□□□□□ -2.36
VPS52YDR484W EMC4P53073 190 aa0.34□□□□□ -2.36
VPS52YDR484W YPL067CQ02754 198 aa0.34□□□□□ -2.36
VPS52YDR484W PFY1P07274 126 aa0.33□□□□□ -2.36
VPS52YDR484W RPL40AP0CH08 128 aaKnown RBP0.33□□□□□ -2.36
VPS52YDR484W RPL40BP0CH09 128 aaKnown RBP0.33□□□□□ -2.36
VPS52YDR484W SUI1P32911 108 aaKnown RBP0.33□□□□□ -2.36
VPS52YDR484W UTP11P34247 250 aaPredicted RBP0.33□□□□□ -2.36
VPS52YDR484W SPG1P50088 95 aa0.33□□□□□ -2.36
VPS52YDR484W PET54P10834 293 aa0.32□□□□□ -2.36
VPS52YDR484W MRPL44P19956 98 aa0.32□□□□□ -2.36
VPS52YDR484W EFM5P53200 248 aaKnown RBP0.32□□□□□ -2.36
VPS52YDR484W YDR366CP87287 132 aa0.32□□□□□ -2.36
VPS52YDR484W RPL14AP36105 138 aaKnown RBP0.32□□□□□ -2.36
VPS52YDR484W YBR013CP38215 129 aa0.32□□□□□ -2.36
VPS52YDR484W RPL14BP38754 138 aaKnown RBP0.32□□□□□ -2.36
VPS52YDR484W MIC27P50945 234 aa0.32□□□□□ -2.36
VPS52YDR484W YOR385WQ08909 290 aa0.32□□□□□ -2.36
VPS52YDR484W YOR1P53049 1477 aa0.31□□□□□ -2.36
VPS52YDR484W BLM10P43583 2143 aa0.31□□□□□ -2.36
VPS52YDR484W RTC6O14464 93 aa0.3□□□□□ -2.36
VPS52YDR484W RPS1AP33442 255 aaKnown RBP0.3□□□□□ -2.36
VPS52YDR484W YAL064WP39711 94 aa0.3□□□□□ -2.36
VPS52YDR484W HPM1P40481 377 aa0.3□□□□□ -2.36
VPS52YDR484W YGL149WP53116 101 aa0.3□□□□□ -2.36
VPS52YDR484W MED11Q99278 115 aa0.3□□□□□ -2.36
VPS52YDR484W ACP1P32463 125 aa0.3□□□□□ -2.36
VPS52YDR484W HYM1P32464 399 aa0.3□□□□□ -2.36
VPS52YDR484W MRPL11P36521 249 aaPredicted RBP0.3□□□□□ -2.36
VPS52YDR484W BRP1P53194 125 aa0.3□□□□□ -2.36
VPS52YDR484W TY4B-JP47024 1803 aa0.29□□□□□ -2.36
VPS52YDR484W YCR050CP25630 102 aa0.29□□□□□ -2.36
VPS52YDR484W RBL2P48606 106 aaKnown RBP0.29□□□□□ -2.36
VPS52YDR484W TVP18Q04767 167 aa0.29□□□□□ -2.36
VPS52YDR484W YLR296WQ05898 108 aa0.29□□□□□ -2.36
VPS52YDR484W YOR376W-AQ3E805 51 aa0.29□□□□□ -2.36
VPS52YDR484W COF1Q03048 143 aaKnown RBP0.28□□□□□ -2.36
VPS52YDR484W ATP14Q12349 124 aa0.28□□□□□ -2.36
VPS52YDR484W YSF3P0C074 85 aaPredicted RBP0.28□□□□□ -2.36
VPS52YDR484W HAP3P13434 144 aa0.28□□□□□ -2.36
VPS52YDR484W YGR039WP53225 103 aa0.28□□□□□ -2.36
VPS52YDR484W HHO1P53551 258 aa0.28□□□□□ -2.36
VPS52YDR484W TIM8P57744 87 aa0.28□□□□□ -2.36
VPS52YDR484W LDB18Q07887 179 aa0.28□□□□□ -2.36
VPS52YDR484W MRPL31P14063 131 aaPredicted RBP0.27□□□□□ -2.37
VPS52YDR484W RPC19P28000 142 aaKnown RBP0.27□□□□□ -2.37
VPS52YDR484W SPC3Q12133 184 aa0.27□□□□□ -2.37
VPS52YDR484W GTT2Q12390 233 aa0.27□□□□□ -2.37
VPS52YDR484W QCR10P37299 77 aa0.26□□□□□ -2.37
VPS52YDR484W AIM18P38884 321 aa0.26□□□□□ -2.37
VPS52YDR484W ELC1Q03071 99 aa0.26□□□□□ -2.37
VPS52YDR484W SNF2P22082 1703 aa0.26□□□□□ -2.37
VPS52YDR484W SNT2P53127 1403 aa0.26□□□□□ -2.37
VPS52YDR484W SUA7P29055 345 aaPredicted RBP0.26□□□□□ -2.37
VPS52YDR484W POR2P40478 281 aa0.26□□□□□ -2.37
VPS52YDR484W CSN9Q03981 162 aa0.26□□□□□ -2.37
VPS52YDR484W SDH7Q04401 133 aa0.26□□□□□ -2.37
VPS52YDR484W TY1B-HO13535 1793 aa0.26□□□□□ -2.37
VPS52YDR484W YRF1-3P0CX14 1859 aa0.25□□□□□ -2.37
VPS52YDR484W YRF1-7P0CX15 1859 aa0.25□□□□□ -2.37
VPS52YDR484W GSP1P32835 219 aaKnown RBP0.25□□□□□ -2.37
VPS52YDR484W CYC2P38909 366 aa0.25□□□□□ -2.37
VPS52YDR484W HSP10P38910 106 aa0.25□□□□□ -2.37
VPS52YDR484W YLR194CQ05777 254 aa0.25□□□□□ -2.37
VPS52YDR484W BNI1P41832 1953 aa0.25□□□□□ -2.37
VPS52YDR484W PRS3P38689 320 aaKnown RBP0.25□□□□□ -2.37
VPS52YDR484W SFT1P43682 97 aa0.25□□□□□ -2.37
VPS52YDR484W YIL014C-AQ02598 104 aa0.25□□□□□ -2.37
VPS52YDR484W YLR361C-AQ3E795 98 aa0.25□□□□□ -2.37
VPS52YDR484W PAU21P0CE86 164 aa0.24□□□□□ -2.37
VPS52YDR484W PAU22P0CE87 164 aa0.24□□□□□ -2.37
VPS52YDR484W YIL163CP40448 117 aa0.24□□□□□ -2.37
VPS52YDR484W RPS29BP41058 56 aaKnown RBP0.24□□□□□ -2.37
VPS52YDR484W PAU12P53343 120 aa0.24□□□□□ -2.37
VPS52YDR484W ADK1P07170 222 aaKnown RBP0.23□□□□□ -2.37
VPS52YDR484W YKL044WP36092 106 aa0.23□□□□□ -2.37
VPS52YDR484W YHR130CP38834 111 aa0.23□□□□□ -2.37
VPS52YDR484W GIM4P40005 111 aaKnown RBP0.23□□□□□ -2.37
VPS52YDR484W PHS1P40857 217 aa0.23□□□□□ -2.37
VPS52YDR484W FCF2Q12035 217 aaPredicted RBP0.23□□□□□ -2.37
VPS52YDR484W AUA1P32450 94 aa0.23□□□□□ -2.37
VPS52YDR484W SRX1P36077 127 aa0.23□□□□□ -2.37
VPS52YDR484W YAP3P38749 330 aa0.23□□□□□ -2.37
VPS52YDR484W GAT4P40569 121 aa0.23□□□□□ -2.37
VPS52YDR484W YJR128WP47162 119 aa0.23□□□□□ -2.37
VPS52YDR484W SEC16P48415 2195 aaKnown RBP0.23□□□□□ -2.37
VPS52YDR484W ERV14P53173 138 aa0.23□□□□□ -2.37
VPS52YDR484W LCL1Q02786 101 aa0.23□□□□□ -2.37
VPS52YDR484W URB1P34241 1764 aaKnown RBP0.22□□□□□ -2.37
VPS52YDR484W EMP24P32803 203 aaKnown RBP0.22□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms