RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	GPI11	Q06636	219 aa		1.56	□□□□□ -2.16
TFB1	YDR311W	LHP1	P33399	275 aa	Known RBP	1.55	□□□□□ -2.16
TFB1	YDR311W	YLR042C	Q07990	161 aa		1.55	□□□□□ -2.16
TFB1	YDR311W	CYR1	P08678	2026 aa	Known RBP	1.55	□□□□□ -2.16
TFB1	YDR311W	YGL010W	P25338	174 aa		1.54	□□□□□ -2.16
TFB1	YDR311W	RPB11	P38902	120 aa		1.54	□□□□□ -2.16
TFB1	YDR311W	YER137C	P40083	148 aa	Known RBP	1.54	□□□□□ -2.16
TFB1	YDR311W	DCV1	P43595	202 aa		1.54	□□□□□ -2.16
TFB1	YDR311W	COA3	Q3E7B2	85 aa		1.54	□□□□□ -2.16
TFB1	YDR311W	MYO2	P19524	1574 aa	Known RBP	1.54	□□□□□ -2.16
TFB1	YDR311W	BRP1	P53194	125 aa		1.54	□□□□□ -2.16
TFB1	YDR311W	KIN28	P06242	306 aa		1.53	□□□□□ -2.16
TFB1	YDR311W	YER039C-A	P0CD97	72 aa		1.53	□□□□□ -2.16
TFB1	YDR311W	ECM31	P38122	312 aa		1.53	□□□□□ -2.16
TFB1	YDR311W	BAT2	P47176	376 aa	Known RBP	1.53	□□□□□ -2.16
TFB1	YDR311W	FUN14	P18411	198 aa		1.52	□□□□□ -2.17
TFB1	YDR311W	MRPL44	P19956	98 aa		1.52	□□□□□ -2.17
TFB1	YDR311W	YKL044W	P36092	106 aa		1.52	□□□□□ -2.17
TFB1	YDR311W	YFL065C	P43539	102 aa		1.52	□□□□□ -2.17
TFB1	YDR311W	YFL051C	P43552	160 aa		1.52	□□□□□ -2.17
TFB1	YDR311W	IGO1	P53897	168 aa		1.52	□□□□□ -2.17
TFB1	YDR311W	NAT5	Q08689	176 aa		1.52	□□□□□ -2.17
TFB1	YDR311W	PAU21	P0CE86	164 aa		1.52	□□□□□ -2.17
TFB1	YDR311W	PAU22	P0CE87	164 aa		1.52	□□□□□ -2.17
TFB1	YDR311W	YAR029W	P39549	74 aa		1.52	□□□□□ -2.17
TFB1	YDR311W	YOR097C	Q12274	175 aa	Predicted RBP	1.52	□□□□□ -2.17
TFB1	YDR311W	GTT2	Q12390	233 aa		1.52	□□□□□ -2.17
TFB1	YDR311W	RTC6	O14464	93 aa		1.51	□□□□□ -2.17
TFB1	YDR311W	NMT1	P14743	455 aa		1.51	□□□□□ -2.17
TFB1	YDR311W	GSP1	P32835	219 aa	Known RBP	1.51	□□□□□ -2.17
TFB1	YDR311W	YBR242W	P38331	238 aa		1.51	□□□□□ -2.17
TFB1	YDR311W	YGL230C	P53074	147 aa		1.51	□□□□□ -2.17
TFB1	YDR311W	YGL149W	P53116	101 aa		1.51	□□□□□ -2.17
TFB1	YDR311W	MPC1	P53157	130 aa	Known RBP	1.51	□□□□□ -2.17
TFB1	YDR311W	YPL067C	Q02754	198 aa		1.51	□□□□□ -2.17
TFB1	YDR311W	KTI11	Q3E840	82 aa		1.51	□□□□□ -2.17
TFB1	YDR311W	YBR027C	P38220	110 aa		1.5	□□□□□ -2.17
TFB1	YDR311W	YFR035C	P43608	114 aa		1.5	□□□□□ -2.17
TFB1	YDR311W	ERV14	P53173	138 aa		1.5	□□□□□ -2.17
TFB1	YDR311W	FCF2	Q12035	217 aa	Predicted RBP	1.5	□□□□□ -2.17
TFB1	YDR311W	AQY2	P0CD90	149 aa		1.5	□□□□□ -2.17
TFB1	YDR311W	SEC59	P20048	519 aa		1.5	□□□□□ -2.17
TFB1	YDR311W	SNF11	P38956	169 aa		1.5	□□□□□ -2.17
TFB1	YDR311W	PAM16	P42949	149 aa		1.5	□□□□□ -2.17
TFB1	YDR311W	SNT2	P53127	1403 aa		1.49	□□□□□ -2.17
TFB1	YDR311W	ACC1	Q00955	2233 aa	Known RBP	1.49	□□□□□ -2.17
TFB1	YDR311W	RIF1	P29539	1916 aa		1.49	□□□□□ -2.17
TFB1	YDR311W	ANB1	P19211	157 aa		1.49	□□□□□ -2.17
TFB1	YDR311W	PRE1	P22141	198 aa	Known RBP	1.49	□□□□□ -2.17
TFB1	YDR311W	CDC39	P25655	2108 aa	Known RBP	1.49	□□□□□ -2.17
TFB1	YDR311W	HSP10	P38910	106 aa		1.49	□□□□□ -2.17
TFB1	YDR311W	FIT1	Q04433	528 aa		1.49	□□□□□ -2.17
TFB1	YDR311W	SPP41	P38904	1435 aa		1.49	□□□□□ -2.17
TFB1	YDR311W	ATG8	P38182	117 aa	RIP-Chip data	1.48	□□□□□ -2.17	not detected
TFB1	YDR311W	GPI19	Q04082	140 aa		1.48	□□□□□ -2.17
TFB1	YDR311W	YGL014C-A	P0C5N1	53 aa		1.48	□□□□□ -2.17
TFB1	YDR311W	RPL40A	P0CH08	128 aa	Known RBP	1.48	□□□□□ -2.17
TFB1	YDR311W	RPL40B	P0CH09	128 aa	Known RBP	1.48	□□□□□ -2.17
TFB1	YDR311W	YHR212W-A	P0CX91	67 aa		1.48	□□□□□ -2.17
TFB1	YDR311W	HYP2	P23301	157 aa	Known RBP	1.48	□□□□□ -2.17
TFB1	YDR311W	RGI1	P40043	161 aa	Predicted RBP	1.48	□□□□□ -2.17
TFB1	YDR311W	MHF1	Q3E835	90 aa		1.48	□□□□□ -2.17
TFB1	YDR311W	IRC20	Q06554	1556 aa		1.47	□□□□□ -2.17
TFB1	YDR311W	MDS3	P53094	1487 aa		1.47	□□□□□ -2.17
TFB1	YDR311W	YCR099C	P25657	155 aa		1.47	□□□□□ -2.17
TFB1	YDR311W	EMP24	P32803	203 aa	Known RBP	1.47	□□□□□ -2.17
TFB1	YDR311W	YHL037C	P38733	133 aa		1.47	□□□□□ -2.17
TFB1	YDR311W	RPS12	P48589	143 aa	Known RBP	1.47	□□□□□ -2.17
TFB1	YDR311W	SED1	Q01589	338 aa		1.47	□□□□□ -2.17
TFB1	YDR311W	YLR296W	Q05898	108 aa		1.47	□□□□□ -2.17
TFB1	YDR311W	VAM10	Q08474	114 aa		1.47	□□□□□ -2.17
TFB1	YDR311W	YPR203W	Q08994	102 aa		1.47	□□□□□ -2.17
TFB1	YDR311W	RPL33A	P05744	107 aa	Known RBP	1.46	□□□□□ -2.18
TFB1	YDR311W	YHR213W	P0CI67	198 aa		1.46	□□□□□ -2.18
TFB1	YDR311W	MRPL15	P36523	253 aa		1.46	□□□□□ -2.18
TFB1	YDR311W	AIM18	P38884	321 aa		1.46	□□□□□ -2.18
TFB1	YDR311W	REV3	P14284	1504 aa		1.46	□□□□□ -2.18
TFB1	YDR311W	DNF1	P32660	1571 aa		1.46	□□□□□ -2.18
TFB1	YDR311W	MRPL11	P36521	249 aa	Predicted RBP	1.46	□□□□□ -2.18
TFB1	YDR311W	RTR2	Q12378	196 aa		1.46	□□□□□ -2.18
TFB1	YDR311W	OCA6	Q12454	224 aa		1.46	□□□□□ -2.18
TFB1	YDR311W	HAP3	P13434	144 aa		1.45	□□□□□ -2.18
TFB1	YDR311W	YHR130C	P38834	111 aa		1.45	□□□□□ -2.18
TFB1	YDR311W	PAU12	P53343	120 aa		1.45	□□□□□ -2.18
TFB1	YDR311W	SEN15	Q04675	128 aa		1.45	□□□□□ -2.18
TFB1	YDR311W	UTP11	P34247	250 aa	Predicted RBP	1.44	□□□□□ -2.18
TFB1	YDR311W	TDA2	P40045	126 aa		1.44	□□□□□ -2.18
TFB1	YDR311W	LST8	P41318	303 aa		1.44	□□□□□ -2.18
TFB1	YDR311W	VAR1	P02381	398 aa		1.44	□□□□□ -2.18
TFB1	YDR311W	HAP2	P06774	265 aa		1.44	□□□□□ -2.18
TFB1	YDR311W	YIL014C-A	Q02598	104 aa		1.44	□□□□□ -2.18
TFB1	YDR311W	TSC11	P40061	1430 aa		1.43	□□□□□ -2.18
TFB1	YDR311W	UBR2	Q07963	1872 aa		1.43	□□□□□ -2.18
TFB1	YDR311W	YCR101C	P25607	182 aa		1.43	□□□□□ -2.18
TFB1	YDR311W	YMR122C	Q03879	124 aa		1.43	□□□□□ -2.18
TFB1	YDR311W	PRM3	Q08931	133 aa		1.43	□□□□□ -2.18
TFB1	YDR311W	YLR365W	Q7LIF2	110 aa		1.43	□□□□□ -2.18
TFB1	YDR311W	TRM732	Q03496	1420 aa		1.43	□□□□□ -2.18
TFB1	YDR311W	BNI1	P41832	1953 aa		1.43	□□□□□ -2.18
TFB1	YDR311W	AIM4	P38305	123 aa	Predicted RBP	1.42	□□□□□ -2.18

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms