RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeastyeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB1YDR311W GPI11Q06636 219 aa1.56□□□□□ -2.16
TFB1YDR311W LHP1P33399 275 aaKnown RBP1.55□□□□□ -2.16
TFB1YDR311W YLR042CQ07990 161 aa1.55□□□□□ -2.16
TFB1YDR311W CYR1P08678 2026 aaKnown RBP1.55□□□□□ -2.16
TFB1YDR311W YGL010WP25338 174 aa1.54□□□□□ -2.16
TFB1YDR311W RPB11P38902 120 aa1.54□□□□□ -2.16
TFB1YDR311W YER137CP40083 148 aaKnown RBP1.54□□□□□ -2.16
TFB1YDR311W DCV1P43595 202 aa1.54□□□□□ -2.16
TFB1YDR311W COA3Q3E7B2 85 aa1.54□□□□□ -2.16
TFB1YDR311W MYO2P19524 1574 aaKnown RBP1.54□□□□□ -2.16
TFB1YDR311W BRP1P53194 125 aa1.54□□□□□ -2.16
TFB1YDR311W KIN28P06242 306 aa1.53□□□□□ -2.16
TFB1YDR311W YER039C-AP0CD97 72 aa1.53□□□□□ -2.16
TFB1YDR311W ECM31P38122 312 aa1.53□□□□□ -2.16
TFB1YDR311W BAT2P47176 376 aaKnown RBP1.53□□□□□ -2.16
TFB1YDR311W FUN14P18411 198 aa1.52□□□□□ -2.17
TFB1YDR311W MRPL44P19956 98 aa1.52□□□□□ -2.17
TFB1YDR311W YKL044WP36092 106 aa1.52□□□□□ -2.17
TFB1YDR311W YFL065CP43539 102 aa1.52□□□□□ -2.17
TFB1YDR311W YFL051CP43552 160 aa1.52□□□□□ -2.17
TFB1YDR311W IGO1P53897 168 aa1.52□□□□□ -2.17
TFB1YDR311W NAT5Q08689 176 aa1.52□□□□□ -2.17
TFB1YDR311W PAU21P0CE86 164 aa1.52□□□□□ -2.17
TFB1YDR311W PAU22P0CE87 164 aa1.52□□□□□ -2.17
TFB1YDR311W YAR029WP39549 74 aa1.52□□□□□ -2.17
TFB1YDR311W YOR097CQ12274 175 aaPredicted RBP1.52□□□□□ -2.17
TFB1YDR311W GTT2Q12390 233 aa1.52□□□□□ -2.17
TFB1YDR311W RTC6O14464 93 aa1.51□□□□□ -2.17
TFB1YDR311W NMT1P14743 455 aa1.51□□□□□ -2.17
TFB1YDR311W GSP1P32835 219 aaKnown RBP1.51□□□□□ -2.17
TFB1YDR311W YBR242WP38331 238 aa1.51□□□□□ -2.17
TFB1YDR311W YGL230CP53074 147 aa1.51□□□□□ -2.17
TFB1YDR311W YGL149WP53116 101 aa1.51□□□□□ -2.17
TFB1YDR311W MPC1P53157 130 aaKnown RBP1.51□□□□□ -2.17
TFB1YDR311W YPL067CQ02754 198 aa1.51□□□□□ -2.17
TFB1YDR311W KTI11Q3E840 82 aa1.51□□□□□ -2.17
TFB1YDR311W YBR027CP38220 110 aa1.5□□□□□ -2.17
TFB1YDR311W YFR035CP43608 114 aa1.5□□□□□ -2.17
TFB1YDR311W ERV14P53173 138 aa1.5□□□□□ -2.17
TFB1YDR311W FCF2Q12035 217 aaPredicted RBP1.5□□□□□ -2.17
TFB1YDR311W AQY2P0CD90 149 aa1.5□□□□□ -2.17
TFB1YDR311W SEC59P20048 519 aa1.5□□□□□ -2.17
TFB1YDR311W SNF11P38956 169 aa1.5□□□□□ -2.17
TFB1YDR311W PAM16P42949 149 aa1.5□□□□□ -2.17
TFB1YDR311W SNT2P53127 1403 aa1.49□□□□□ -2.17
TFB1YDR311W ACC1Q00955 2233 aaKnown RBP1.49□□□□□ -2.17
TFB1YDR311W RIF1P29539 1916 aa1.49□□□□□ -2.17
TFB1YDR311W ANB1P19211 157 aa1.49□□□□□ -2.17
TFB1YDR311W PRE1P22141 198 aaKnown RBP1.49□□□□□ -2.17
TFB1YDR311W CDC39P25655 2108 aaKnown RBP1.49□□□□□ -2.17
TFB1YDR311W HSP10P38910 106 aa1.49□□□□□ -2.17
TFB1YDR311W FIT1Q04433 528 aa1.49□□□□□ -2.17
TFB1YDR311W SPP41P38904 1435 aa1.49□□□□□ -2.17
TFB1YDR311W ATG8P38182 117 aaRIP-Chip data1.48□□□□□ -2.17not detected
TFB1YDR311W GPI19Q04082 140 aa1.48□□□□□ -2.17
TFB1YDR311W YGL014C-AP0C5N1 53 aa1.48□□□□□ -2.17
TFB1YDR311W RPL40AP0CH08 128 aaKnown RBP1.48□□□□□ -2.17
TFB1YDR311W RPL40BP0CH09 128 aaKnown RBP1.48□□□□□ -2.17
TFB1YDR311W YHR212W-AP0CX91 67 aa1.48□□□□□ -2.17
TFB1YDR311W HYP2P23301 157 aaKnown RBP1.48□□□□□ -2.17
TFB1YDR311W RGI1P40043 161 aaPredicted RBP1.48□□□□□ -2.17
TFB1YDR311W MHF1Q3E835 90 aa1.48□□□□□ -2.17
TFB1YDR311W IRC20Q06554 1556 aa1.47□□□□□ -2.17
TFB1YDR311W MDS3P53094 1487 aa1.47□□□□□ -2.17
TFB1YDR311W YCR099CP25657 155 aa1.47□□□□□ -2.17
TFB1YDR311W EMP24P32803 203 aaKnown RBP1.47□□□□□ -2.17
TFB1YDR311W YHL037CP38733 133 aa1.47□□□□□ -2.17
TFB1YDR311W RPS12P48589 143 aaKnown RBP1.47□□□□□ -2.17
TFB1YDR311W SED1Q01589 338 aa1.47□□□□□ -2.17
TFB1YDR311W YLR296WQ05898 108 aa1.47□□□□□ -2.17
TFB1YDR311W VAM10Q08474 114 aa1.47□□□□□ -2.17
TFB1YDR311W YPR203WQ08994 102 aa1.47□□□□□ -2.17
TFB1YDR311W RPL33AP05744 107 aaKnown RBP1.46□□□□□ -2.18
TFB1YDR311W YHR213WP0CI67 198 aa1.46□□□□□ -2.18
TFB1YDR311W MRPL15P36523 253 aa1.46□□□□□ -2.18
TFB1YDR311W AIM18P38884 321 aa1.46□□□□□ -2.18
TFB1YDR311W REV3P14284 1504 aa1.46□□□□□ -2.18
TFB1YDR311W DNF1P32660 1571 aa1.46□□□□□ -2.18
TFB1YDR311W MRPL11P36521 249 aaPredicted RBP1.46□□□□□ -2.18
TFB1YDR311W RTR2Q12378 196 aa1.46□□□□□ -2.18
TFB1YDR311W OCA6Q12454 224 aa1.46□□□□□ -2.18
TFB1YDR311W HAP3P13434 144 aa1.45□□□□□ -2.18
TFB1YDR311W YHR130CP38834 111 aa1.45□□□□□ -2.18
TFB1YDR311W PAU12P53343 120 aa1.45□□□□□ -2.18
TFB1YDR311W SEN15Q04675 128 aa1.45□□□□□ -2.18
TFB1YDR311W UTP11P34247 250 aaPredicted RBP1.44□□□□□ -2.18
TFB1YDR311W TDA2P40045 126 aa1.44□□□□□ -2.18
TFB1YDR311W LST8P41318 303 aa1.44□□□□□ -2.18
TFB1YDR311W VAR1P02381 398 aa1.44□□□□□ -2.18
TFB1YDR311W HAP2P06774 265 aa1.44□□□□□ -2.18
TFB1YDR311W YIL014C-AQ02598 104 aa1.44□□□□□ -2.18
TFB1YDR311W TSC11P40061 1430 aa1.43□□□□□ -2.18
TFB1YDR311W UBR2Q07963 1872 aa1.43□□□□□ -2.18
TFB1YDR311W YCR101CP25607 182 aa1.43□□□□□ -2.18
TFB1YDR311W YMR122CQ03879 124 aa1.43□□□□□ -2.18
TFB1YDR311W PRM3Q08931 133 aa1.43□□□□□ -2.18
TFB1YDR311W YLR365WQ7LIF2 110 aa1.43□□□□□ -2.18
TFB1YDR311W TRM732Q03496 1420 aa1.43□□□□□ -2.18
TFB1YDR311W BNI1P41832 1953 aa1.43□□□□□ -2.18
TFB1YDR311W AIM4P38305 123 aaPredicted RBP1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms