RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C DFR1P07807 211 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SSD1YDR293C AQY1P0CD91 305 aa1.82□□□□□ -2.12
SSD1YDR293C HMRA2P0CY13 119 aa1.82□□□□□ -2.12
SSD1YDR293C RPL14AP36105 138 aaKnown RBP1.82□□□□□ -2.12
SSD1YDR293C RPL14BP38754 138 aaKnown RBP1.82□□□□□ -2.12
SSD1YDR293C FLO5P38894 1075 aa1.82□□□□□ -2.12
SSD1YDR293C SPI1P40092 148 aa1.82□□□□□ -2.12
SSD1YDR293C URM1P40554 99 aaPredicted RBP1.82□□□□□ -2.12
SSD1YDR293C SDS23P53172 527 aa1.82□□□□□ -2.12
SSD1YDR293C YGR018CP53211 109 aa1.82□□□□□ -2.12
SSD1YDR293C WSC2P53832 503 aa1.82□□□□□ -2.12
SSD1YDR293C YCR075W-AQ3E830 75 aa1.82□□□□□ -2.12
SSD1YDR293C MRPL31P14063 131 aaPredicted RBP1.82□□□□□ -2.12
SSD1YDR293C RPI1P23250 407 aaKnown RBP1.82□□□□□ -2.12
SSD1YDR293C RPS2P25443 254 aaKnown RBP1.82□□□□□ -2.12
SSD1YDR293C TIR2P33890 251 aa1.82□□□□□ -2.12
SSD1YDR293C YGR017WP53210 297 aa1.82□□□□□ -2.12
SSD1YDR293C YDR042CQ03205 200 aa1.82□□□□□ -2.12
SSD1YDR293C SCW10Q04951 389 aa1.82□□□□□ -2.12
SSD1YDR293C YLR296WQ05898 108 aa1.82□□□□□ -2.12
SSD1YDR293C ATG39Q06159 398 aa1.82□□□□□ -2.12
SSD1YDR293C MSA1Q08471 629 aa1.82□□□□□ -2.12
SSD1YDR293C CCW12Q12127 133 aa1.82□□□□□ -2.12
SSD1YDR293C TIM22Q12328 207 aa1.82□□□□□ -2.12
SSD1YDR293C YLL053CP0CD98 152 aa1.82□□□□□ -2.12
SSD1YDR293C MTR2P34232 184 aaKnown RBP1.82□□□□□ -2.12
SSD1YDR293C SRP14P38985 146 aa1.82□□□□□ -2.12
SSD1YDR293C KEG1P43614 200 aa1.82□□□□□ -2.12
SSD1YDR293C NCA3P46955 337 aa1.82□□□□□ -2.12
SSD1YDR293C ERI1P62651 68 aaKnown RBP1.82□□□□□ -2.12
SSD1YDR293C SKO1Q02100 647 aa1.82□□□□□ -2.12
SSD1YDR293C MGR2Q02889 113 aa1.82□□□□□ -2.12
SSD1YDR293C RRG8Q06109 277 aa1.82□□□□□ -2.12
SSD1YDR293C PRM3Q08931 133 aa1.82□□□□□ -2.12
SSD1YDR293C YOS1Q3E834 85 aa1.82□□□□□ -2.12
SSD1YDR293C POR1P04840 283 aaKnown RBP1.81□□□□□ -2.12
SSD1YDR293C PRE1P22141 198 aaKnown RBP1.81□□□□□ -2.12
SSD1YDR293C MST28P39552 234 aa1.81□□□□□ -2.12
SSD1YDR293C PEX17P40155 199 aa1.81□□□□□ -2.12
SSD1YDR293C AGE2P40529 298 aa1.81□□□□□ -2.12
SSD1YDR293C PIR5P46999 287 aa1.81□□□□□ -2.12
SSD1YDR293C MST27P53176 234 aa1.81□□□□□ -2.12
SSD1YDR293C THG1P53215 237 aaKnown RBP1.81□□□□□ -2.12
SSD1YDR293C DPP1Q05521 289 aa1.81□□□□□ -2.12
SSD1YDR293C YDR034W-BQ6Q5X2 51 aa1.81□□□□□ -2.12
SSD1YDR293C YCR022CP25620 114 aa1.81□□□□□ -2.12
SSD1YDR293C UTR5P32630 166 aa1.81□□□□□ -2.12
SSD1YDR293C YNL234WP53857 426 aa1.81□□□□□ -2.12
SSD1YDR293C IZH1Q03419 316 aa1.81□□□□□ -2.12
SSD1YDR293C YIL134C-AQ45U18 67 aa1.81□□□□□ -2.12
SSD1YDR293C Q0255P03881 472 aa1.81□□□□□ -2.12
SSD1YDR293C QCR8P08525 94 aa1.81□□□□□ -2.12
SSD1YDR293C YCR023CP25351 611 aa1.81□□□□□ -2.12
SSD1YDR293C ZRT1P32804 376 aa1.81□□□□□ -2.12
SSD1YDR293C GSP1P32835 219 aaKnown RBP1.81□□□□□ -2.12
SSD1YDR293C GSP2P32836 220 aaKnown RBP1.81□□□□□ -2.12
SSD1YDR293C MRPL49P40858 161 aaPredicted RBP1.81□□□□□ -2.12
SSD1YDR293C SWT21P53873 357 aaPredicted RBP1.81□□□□□ -2.12
SSD1YDR293C DYN2Q02647 92 aa1.81□□□□□ -2.12
SSD1YDR293C POS5Q06892 414 aa1.81□□□□□ -2.12
SSD1YDR293C PPT2Q12036 173 aa1.81□□□□□ -2.12
SSD1YDR293C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
SSD1YDR293C AYT1Q12226 474 aa1.81□□□□□ -2.12
SSD1YDR293C TPT1Q12272 230 aaKnown RBP1.81□□□□□ -2.12
SSD1YDR293C YNL146C-AQ3E7Z1 64 aa1.81□□□□□ -2.12
SSD1YDR293C TRP1P00912 224 aa1.8□□□□□ -2.12
SSD1YDR293C PAI3P01094 68 aa1.8□□□□□ -2.12
SSD1YDR293C YCR085WP25650 117 aa1.8□□□□□ -2.12
SSD1YDR293C AGA2P32781 87 aa1.8□□□□□ -2.12
SSD1YDR293C MRPL38P35996 138 aaPredicted RBP1.8□□□□□ -2.12
SSD1YDR293C YKR070WP36151 352 aaKnown RBP1.8□□□□□ -2.12
SSD1YDR293C YPL073CP40323 161 aa1.8□□□□□ -2.12
SSD1YDR293C TDA4P47153 279 aa1.8□□□□□ -2.12
SSD1YDR293C MIC26P50087 233 aa1.8□□□□□ -2.12
SSD1YDR293C UBC11P52492 156 aa1.8□□□□□ -2.12
SSD1YDR293C YIP3P53633 176 aa1.8□□□□□ -2.12
SSD1YDR293C DAD4P69851 72 aa1.8□□□□□ -2.12
SSD1YDR293C AIM34Q03673 198 aa1.8□□□□□ -2.12
SSD1YDR293C WIP1Q2V2P8 89 aa1.8□□□□□ -2.12
SSD1YDR293C RPF1P38805 295 aaKnown RBP1.8□□□□□ -2.12
SSD1YDR293C YNL208WP40159 199 aaKnown RBP1.8□□□□□ -2.12
SSD1YDR293C CDC40P40968 455 aaPredicted RBP1.8□□□□□ -2.12
SSD1YDR293C SED1Q01589 338 aa1.8□□□□□ -2.12
SSD1YDR293C API2Q04413 109 aa1.8□□□□□ -2.12
SSD1YDR293C FCF1Q05498 189 aaPredicted RBP1.8□□□□□ -2.12
SSD1YDR293C GAT3Q07928 141 aa1.8□□□□□ -2.12
SSD1YDR293C YIL102C-AQ2V2P5 75 aa1.8□□□□□ -2.12
SSD1YDR293C YMR105W-AQ8TGS8 64 aa1.8□□□□□ -2.12
SSD1YDR293C IGO2Q9P305 131 aa1.8□□□□□ -2.12
SSD1YDR293C CCH1P50077 2039 aa1.8□□□□□ -2.12
SSD1YDR293C INO2P26798 304 aa1.8□□□□□ -2.12
SSD1YDR293C DSK2P48510 373 aa1.8□□□□□ -2.12
SSD1YDR293C VPS71Q03433 280 aa1.8□□□□□ -2.12
SSD1YDR293C POC4Q12245 148 aaPredicted RBP1.8□□□□□ -2.12
SSD1YDR293C YOR008C-AQ3E7B9 74 aa1.8□□□□□ -2.12
SSD1YDR293C YOR020W-AQ3E824 90 aa1.8□□□□□ -2.12
SSD1YDR293C TAO3P40468 2376 aa1.8□□□□□ -2.12
SSD1YDR293C RAD6P06104 172 aa1.79□□□□□ -2.12
SSD1YDR293C YHR213WP0CI67 198 aa1.79□□□□□ -2.12
SSD1YDR293C MBB1P39534 108 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 51.9 ms