RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W YLR296WQ05898 108 aa3.38□□□□□ -1.87
HSP42YDR171W YFH1Q07540 174 aa3.38□□□□□ -1.87
HSP42YDR171W FIT3Q08907 204 aa3.38□□□□□ -1.87
HSP42YDR171W WIP1Q2V2P8 89 aa3.38□□□□□ -1.87
HSP42YDR171W BOL1Q3E793 110 aa3.38□□□□□ -1.87
HSP42YDR171W SCS22Q6Q595 175 aa3.38□□□□□ -1.87
HSP42YDR171W HTL1Q9URQ5 78 aa3.38□□□□□ -1.87
HSP42YDR171W SAG1P20840 650 aa3.37□□□□□ -1.87
HSP42YDR171W YKL044WP36092 106 aa3.37□□□□□ -1.87
HSP42YDR171W YMR181CQ03231 154 aa3.37□□□□□ -1.87
HSP42YDR171W YDR102CQ03864 110 aa3.37□□□□□ -1.87
HSP42YDR171W YDR391CQ04170 232 aa3.37□□□□□ -1.87
HSP42YDR171W ARC18Q05933 178 aaKnown RBP3.37□□□□□ -1.87
HSP42YDR171W RDL2Q08742 149 aaKnown RBP3.37□□□□□ -1.87
HSP42YDR171W POC4Q12245 148 aaPredicted RBP3.37□□□□□ -1.87
HSP42YDR171W YDL180WQ12301 547 aa3.37□□□□□ -1.87
HSP42YDR171W PRP46Q12417 451 aaPredicted RBP3.37□□□□□ -1.87
HSP42YDR171W NAG1Q8TGN9 163 aa3.37□□□□□ -1.87
HSP42YDR171W VPS63O13549 108 aa3.36□□□□□ -1.87
HSP42YDR171W RPL23AP0CX41 137 aaKnown RBP3.36□□□□□ -1.87
HSP42YDR171W RPL23BP0CX42 137 aaKnown RBP3.36□□□□□ -1.87
HSP42YDR171W HSP12P22943 109 aaKnown RBP3.36□□□□□ -1.87
HSP42YDR171W PCL1P24867 279 aa3.36□□□□□ -1.87
HSP42YDR171W HSP150P32478 413 aa3.36□□□□□ -1.87
HSP42YDR171W RPS27AP35997 82 aaKnown RBP3.36□□□□□ -1.87
HSP42YDR171W RPS27BP38711 82 aa3.36□□□□□ -1.87
HSP42YDR171W PAU7P39545 55 aa3.36□□□□□ -1.87
HSP42YDR171W YNL200CP40165 246 aaKnown RBP3.36□□□□□ -1.87
HSP42YDR171W YIL029CP40538 142 aa3.36□□□□□ -1.87
HSP42YDR171W UBC13P52490 153 aa3.36□□□□□ -1.87
HSP42YDR171W SDS23P53172 527 aa3.36□□□□□ -1.87
HSP42YDR171W SWT21P53873 357 aaPredicted RBP3.36□□□□□ -1.87
HSP42YDR171W UPS1Q05776 175 aa3.36□□□□□ -1.87
HSP42YDR171W PRM3Q08931 133 aa3.36□□□□□ -1.87
HSP42YDR171W GRE1Q08969 168 aa3.36□□□□□ -1.87
HSP42YDR171W YGL258W-AQ3E740 77 aa3.36□□□□□ -1.87
HSP42YDR171W YCR075W-AQ3E830 75 aa3.36□□□□□ -1.87
HSP42YDR171W TRP1P00912 224 aa3.35□□□□□ -1.87
HSP42YDR171W YMR31P19955 123 aa3.35□□□□□ -1.87
HSP42YDR171W TOM40P23644 387 aaKnown RBP3.35□□□□□ -1.87
HSP42YDR171W ROX3P25046 220 aa3.35□□□□□ -1.87
HSP42YDR171W FPR2P32472 135 aa3.35□□□□□ -1.87
HSP42YDR171W MCH2P36032 473 aa3.35□□□□□ -1.87
HSP42YDR171W YBR090CP38253 122 aa3.35□□□□□ -1.87
HSP42YDR171W MED6P38782 295 aa3.35□□□□□ -1.87
HSP42YDR171W ECM14P38836 430 aa3.35□□□□□ -1.87
HSP42YDR171W YNL184CP53876 108 aa3.35□□□□□ -1.87
HSP42YDR171W YPL080CQ02826 108 aa3.35□□□□□ -1.87
HSP42YDR171W ECM18Q04623 453 aa3.35□□□□□ -1.87
HSP42YDR171W YOL118CQ08259 102 aa3.35□□□□□ -1.87
HSP42YDR171W UTP23Q12339 254 aaKnown RBP3.35□□□□□ -1.87
HSP42YDR171W MPD1Q12404 318 aaKnown RBP3.35□□□□□ -1.87
HSP42YDR171W YOR192C-CQ3E736 78 aa3.35□□□□□ -1.87
HSP42YDR171W TOM1Q03280 3268 aa3.34□□□□□ -1.87
HSP42YDR171W RPS8AP0CX39 200 aaKnown RBP3.34□□□□□ -1.87
HSP42YDR171W RPS8BP0CX40 200 aaKnown RBP3.34□□□□□ -1.87
HSP42YDR171W INO4P13902 151 aa3.34□□□□□ -1.87
HSP42YDR171W MXR2P25566 168 aa3.34□□□□□ -1.87
HSP42YDR171W IMP1P28627 190 aa3.34□□□□□ -1.87
HSP42YDR171W APS1P35181 156 aa3.34□□□□□ -1.87
HSP42YDR171W ATX1P38636 73 aa3.34□□□□□ -1.87
HSP42YDR171W YER079WP40052 210 aaKnown RBP3.34□□□□□ -1.87
HSP42YDR171W FOL3Q12676 427 aaPredicted RBP3.34□□□□□ -1.87
HSP42YDR171W RPL27BP0C2H7 136 aaKnown RBP3.33□□□□□ -1.88
HSP42YDR171W MRPL31P14063 131 aaPredicted RBP3.33□□□□□ -1.88
HSP42YDR171W YCR023CP25351 611 aa3.33□□□□□ -1.88
HSP42YDR171W VHS2P40463 436 aa3.33□□□□□ -1.88
HSP42YDR171W DYN2Q02647 92 aa3.33□□□□□ -1.88
HSP42YDR171W MRX11Q03079 207 aa3.33□□□□□ -1.88
HSP42YDR171W YDR042CQ03205 200 aa3.33□□□□□ -1.88
HSP42YDR171W MIX17Q03667 156 aa3.33□□□□□ -1.88
HSP42YDR171W RAV2Q03956 351 aa3.33□□□□□ -1.88
HSP42YDR171W YIR021W-AQ3E739 70 aa3.33□□□□□ -1.88
HSP42YDR171W YOS1Q3E834 85 aa3.33□□□□□ -1.88
HSP42YDR171W YMR316C-AI2HB70 103 aa3.32□□□□□ -1.88
HSP42YDR171W CPT1P17898 393 aa3.32□□□□□ -1.88
HSP42YDR171W COX10P21592 462 aa3.32□□□□□ -1.88
HSP42YDR171W YPS1P32329 569 aa3.32□□□□□ -1.88
HSP42YDR171W NHP2P32495 156 aaPredicted RBP3.32□□□□□ -1.88
HSP42YDR171W YKR041WP36134 250 aa3.32□□□□□ -1.88
HSP42YDR171W YER181CP40097 107 aa3.32□□□□□ -1.88
HSP42YDR171W YPL073CP40323 161 aa3.32□□□□□ -1.88
HSP42YDR171W REE1P40893 198 aa3.32□□□□□ -1.88
HSP42YDR171W YFL065CP43539 102 aa3.32□□□□□ -1.88
HSP42YDR171W OST2P46964 130 aa3.32□□□□□ -1.88
HSP42YDR171W YIP3P53633 176 aa3.32□□□□□ -1.88
HSP42YDR171W SUR7P54003 302 aa3.32□□□□□ -1.88
HSP42YDR171W FIT2Q08906 153 aa3.32□□□□□ -1.88
HSP42YDR171W YPR203WQ08994 102 aa3.32□□□□□ -1.88
HSP42YDR171W ISD11Q6Q560 94 aa3.32□□□□□ -1.88
HSP42YDR171W TAO3P40468 2376 aa3.32□□□□□ -1.88
HSP42YDR171W PIS1P06197 220 aaKnown RBP3.31□□□□□ -1.88
HSP42YDR171W RPS16AP0CX51 143 aaKnown RBP3.31□□□□□ -1.88
HSP42YDR171W RPS16BP0CX52 143 aaKnown RBP3.31□□□□□ -1.88
HSP42YDR171W YHR214C-DP0CX93 97 aa3.31□□□□□ -1.88
HSP42YDR171W YEL045CP32616 141 aa3.31□□□□□ -1.88
HSP42YDR171W FZF1P32805 299 aa3.31□□□□□ -1.88
HSP42YDR171W YHR130CP38834 111 aa3.31□□□□□ -1.88
HSP42YDR171W SNF11P38956 169 aa3.31□□□□□ -1.88
HSP42YDR171W EGT2P42835 1041 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms