RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C LSM1P47017 172 aaKnown RBP0.35□□□□□ -2.35
SWI5YDR146C YJL009WP47078 108 aa0.35□□□□□ -2.35
SWI5YDR146C HUG1Q6Q5K6 68 aa0.35□□□□□ -2.35
SWI5YDR146C QCR6P00127 147 aa0.35□□□□□ -2.35
SWI5YDR146C YHR213WP0CI67 198 aa0.35□□□□□ -2.35
SWI5YDR146C PET54P10834 293 aa0.35□□□□□ -2.35
SWI5YDR146C EMC4P53073 190 aa0.35□□□□□ -2.35
SWI5YDR146C NAT5Q08689 176 aa0.35□□□□□ -2.35
SWI5YDR146C SUI1P32911 108 aaKnown RBP0.34□□□□□ -2.35
SWI5YDR146C SFT2P38166 215 aa0.34□□□□□ -2.35
SWI5YDR146C YBR013CP38215 129 aa0.34□□□□□ -2.35
SWI5YDR146C LSM8P47093 109 aaKnown RBP0.34□□□□□ -2.35
SWI5YDR146C YOR034C-AQ3E735 80 aa0.34□□□□□ -2.35
SWI5YDR146C URA2P07259 2214 aaKnown RBP0.34□□□□□ -2.36
SWI5YDR146C SRL3P36167 246 aa0.34□□□□□ -2.36
SWI5YDR146C MIC27P50945 234 aa0.34□□□□□ -2.36
SWI5YDR146C YMR321CQ04898 105 aa0.34□□□□□ -2.36
SWI5YDR146C DDP1Q99321 188 aaKnown RBP0.34□□□□□ -2.36
SWI5YDR146C YOR1P53049 1477 aa0.33□□□□□ -2.36
SWI5YDR146C YDR366CP87287 132 aa0.33□□□□□ -2.36
SWI5YDR146C FIT3Q08907 204 aa0.33□□□□□ -2.36
SWI5YDR146C COA6Q3E846 104 aa0.33□□□□□ -2.36
SWI5YDR146C TY4B-JP47024 1803 aa0.33□□□□□ -2.36
SWI5YDR146C ANB1P19211 157 aa0.32□□□□□ -2.36
SWI5YDR146C TRS20P38334 175 aa0.32□□□□□ -2.36
SWI5YDR146C RBL2P48606 106 aaKnown RBP0.32□□□□□ -2.36
SWI5YDR146C EFM5P53200 248 aaKnown RBP0.32□□□□□ -2.36
SWI5YDR146C COF1Q03048 143 aaKnown RBP0.32□□□□□ -2.36
SWI5YDR146C RAF1Q06891 181 aa0.32□□□□□ -2.36
SWI5YDR146C GTT2Q12390 233 aa0.32□□□□□ -2.36
SWI5YDR146C SNT2P53127 1403 aa0.32□□□□□ -2.36
SWI5YDR146C RTC6O14464 93 aa0.31□□□□□ -2.36
SWI5YDR146C RPL14AP36105 138 aaKnown RBP0.31□□□□□ -2.36
SWI5YDR146C RPL14BP38754 138 aaKnown RBP0.31□□□□□ -2.36
SWI5YDR146C YAL064WP39711 94 aa0.31□□□□□ -2.36
SWI5YDR146C BRP1P53194 125 aa0.31□□□□□ -2.36
SWI5YDR146C YLR296WQ05898 108 aa0.31□□□□□ -2.36
SWI5YDR146C YSF3P0C074 85 aaPredicted RBP0.31□□□□□ -2.36
SWI5YDR146C YCR050CP25630 102 aa0.31□□□□□ -2.36
SWI5YDR146C QCR10P37299 77 aa0.31□□□□□ -2.36
SWI5YDR146C HPM1P40481 377 aa0.31□□□□□ -2.36
SWI5YDR146C BLM10P43583 2143 aa0.31□□□□□ -2.36
SWI5YDR146C MRPL44P19956 98 aa0.3□□□□□ -2.36
SWI5YDR146C RPC19P28000 142 aaKnown RBP0.3□□□□□ -2.36
SWI5YDR146C MRPL11P36521 249 aaPredicted RBP0.3□□□□□ -2.36
SWI5YDR146C SPG1P50088 95 aa0.3□□□□□ -2.36
SWI5YDR146C YGR039WP53225 103 aa0.3□□□□□ -2.36
SWI5YDR146C YRF1-3P0CX14 1859 aa0.3□□□□□ -2.36
SWI5YDR146C YRF1-7P0CX15 1859 aa0.3□□□□□ -2.36
SWI5YDR146C TY1B-HO13535 1793 aa0.3□□□□□ -2.36
SWI5YDR146C SNF2P22082 1703 aa0.3□□□□□ -2.36
SWI5YDR146C AIM18P38884 321 aa0.29□□□□□ -2.36
SWI5YDR146C LDB18Q07887 179 aa0.29□□□□□ -2.36
SWI5YDR146C SPC3Q12133 184 aa0.29□□□□□ -2.36
SWI5YDR146C HAP3P13434 144 aa0.28□□□□□ -2.36
SWI5YDR146C HSP10P38910 106 aa0.28□□□□□ -2.36
SWI5YDR146C POR2P40478 281 aa0.28□□□□□ -2.36
SWI5YDR146C ELC1Q03071 99 aa0.28□□□□□ -2.36
SWI5YDR146C TVP18Q04767 167 aa0.28□□□□□ -2.36
SWI5YDR146C FCF2Q12035 217 aaPredicted RBP0.28□□□□□ -2.36
SWI5YDR146C MED11Q99278 115 aa0.28□□□□□ -2.36
SWI5YDR146C BNI1P41832 1953 aa0.28□□□□□ -2.36
SWI5YDR146C PFY1P07274 126 aa0.28□□□□□ -2.37
SWI5YDR146C SUA7P29055 345 aaPredicted RBP0.28□□□□□ -2.37
SWI5YDR146C PRS3P38689 320 aaKnown RBP0.28□□□□□ -2.37
SWI5YDR146C HHO1P53551 258 aa0.28□□□□□ -2.37
SWI5YDR146C SDH7Q04401 133 aa0.28□□□□□ -2.37
SWI5YDR146C PAU21P0CE86 164 aa0.27□□□□□ -2.37
SWI5YDR146C PAU22P0CE87 164 aa0.27□□□□□ -2.37
SWI5YDR146C MRPL31P14063 131 aaPredicted RBP0.26□□□□□ -2.37
SWI5YDR146C HYM1P32464 399 aa0.26□□□□□ -2.37
SWI5YDR146C SRX1P36077 127 aa0.26□□□□□ -2.37
SWI5YDR146C YLR194CQ05777 254 aa0.26□□□□□ -2.37
SWI5YDR146C ATP14Q12349 124 aa0.26□□□□□ -2.37
SWI5YDR146C GSP1P32835 219 aaKnown RBP0.25□□□□□ -2.37
SWI5YDR146C YIL163CP40448 117 aa0.25□□□□□ -2.37
SWI5YDR146C CSN9Q03981 162 aa0.25□□□□□ -2.37
SWI5YDR146C ENV10Q99382 181 aa0.25□□□□□ -2.37
SWI5YDR146C YJR128WP47162 119 aa0.24□□□□□ -2.37
SWI5YDR146C RPL36BO14455 100 aaKnown RBP0.23□□□□□ -2.37
SWI5YDR146C RPL36AP05745 100 aaPredicted RBP0.23□□□□□ -2.37
SWI5YDR146C AUA1P32450 94 aa0.23□□□□□ -2.37
SWI5YDR146C EMP24P32803 203 aaKnown RBP0.23□□□□□ -2.37
SWI5YDR146C YFR035CP43608 114 aa0.23□□□□□ -2.37
SWI5YDR146C YGR017WP53210 297 aa0.23□□□□□ -2.37
SWI5YDR146C ARL3Q02804 198 aa0.23□□□□□ -2.37
SWI5YDR146C HPA2Q06592 156 aa0.23□□□□□ -2.37
SWI5YDR146C SEC16P48415 2195 aaKnown RBP0.23□□□□□ -2.37
SWI5YDR146C PHS1P40857 217 aa0.23□□□□□ -2.37
SWI5YDR146C BRR2P32639 2163 aaKnown RBP0.23□□□□□ -2.37
SWI5YDR146C GIM4P40005 111 aaKnown RBP0.22□□□□□ -2.37
SWI5YDR146C ERV14P53173 138 aa0.22□□□□□ -2.37
SWI5YDR146C FAS2P19097 1887 aaKnown RBP0.22□□□□□ -2.37
SWI5YDR146C YAP3P38749 330 aa0.22□□□□□ -2.37
SWI5YDR146C MYO1P08964 1928 aa0.21□□□□□ -2.38
SWI5YDR146C YIL014C-AQ02598 104 aa0.21□□□□□ -2.38
SWI5YDR146C LCL1Q02786 101 aa0.21□□□□□ -2.38
SWI5YDR146C YOR376W-AQ3E805 51 aa0.21□□□□□ -2.38
SWI5YDR146C SEC59P20048 519 aa0.2□□□□□ -2.38
SWI5YDR146C TRM732Q03496 1420 aa0.2□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms