RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	QCR10	P37299	77 aa		2.51	□□□□□ -2.01
RPN5	YDL147W	YAR064W	P39563	99 aa		2.51	□□□□□ -2.01
RPN5	YDL147W	SFT1	P43682	97 aa		2.51	□□□□□ -2.01
RPN5	YDL147W	TVP18	Q04767	167 aa		2.51	□□□□□ -2.01
RPN5	YDL147W	MHF1	Q3E835	90 aa		2.51	□□□□□ -2.01
RPN5	YDL147W	SFT2	P38166	215 aa		2.5	□□□□□ -2.01
RPN5	YDL147W	ATG8	P38182	117 aa	RIP-Chip data	2.5	□□□□□ -2.01	not detected
RPN5	YDL147W	HYM1	P32464	399 aa		2.49	□□□□□ -2.01
RPN5	YDL147W	YAL064W	P39711	94 aa		2.49	□□□□□ -2.01
RPN5	YDL147W	SDH7	Q04401	133 aa		2.49	□□□□□ -2.01
RPN5	YDL147W	TRS20	P38334	175 aa		2.48	□□□□□ -2.01
RPN5	YDL147W	RPL33A	P05744	107 aa	Known RBP	2.47	□□□□□ -2.01
RPN5	YDL147W	HUA1	P40325	198 aa		2.47	□□□□□ -2.01
RPN5	YDL147W	BRP1	P53194	125 aa		2.47	□□□□□ -2.01
RPN5	YDL147W	SLH1	P53327	1967 aa	Known RBP	2.47	□□□□□ -2.01
RPN5	YDL147W	YPL067C	Q02754	198 aa		2.46	□□□□□ -2.02
RPN5	YDL147W	FUN14	P18411	198 aa		2.45	□□□□□ -2.02
RPN5	YDL147W	ANB1	P19211	157 aa		2.45	□□□□□ -2.02
RPN5	YDL147W	YIL102C	P40488	101 aa		2.45	□□□□□ -2.02
RPN5	YDL147W	MRP49	P32388	137 aa		2.44	□□□□□ -2.02
RPN5	YDL147W	VMA7	P39111	118 aa		2.44	□□□□□ -2.02
RPN5	YDL147W	YGL014C-A	P0C5N1	53 aa		2.43	□□□□□ -2.02
RPN5	YDL147W	NMT1	P14743	455 aa		2.43	□□□□□ -2.02
RPN5	YDL147W	HSP10	P38910	106 aa		2.43	□□□□□ -2.02
RPN5	YDL147W	YGL149W	P53116	101 aa		2.43	□□□□□ -2.02
RPN5	YDL147W	CCW12	Q12127	133 aa		2.43	□□□□□ -2.02
RPN5	YDL147W	YHR213W	P0CI67	198 aa		2.42	□□□□□ -2.02
RPN5	YDL147W	HAP3	P13434	144 aa		2.42	□□□□□ -2.02
RPN5	YDL147W	LST8	P41318	303 aa		2.42	□□□□□ -2.02
RPN5	YDL147W	YNL122C	P53921	115 aa	Predicted RBP	2.42	□□□□□ -2.02
RPN5	YDL147W	YMR122C	Q03879	124 aa		2.42	□□□□□ -2.02
RPN5	YDL147W	SEN15	Q04675	128 aa		2.42	□□□□□ -2.02
RPN5	YDL147W	IRC21	Q04772	201 aa		2.42	□□□□□ -2.02
RPN5	YDL147W	PAU21	P0CE86	164 aa		2.41	□□□□□ -2.02
RPN5	YDL147W	PAU22	P0CE87	164 aa		2.41	□□□□□ -2.02
RPN5	YDL147W	GAT4	P40569	121 aa		2.41	□□□□□ -2.02
RPN5	YDL147W	HSL1	P34244	1518 aa		2.41	□□□□□ -2.02
RPN5	YDL147W	YCR001W	P25347	104 aa		2.4	□□□□□ -2.03
RPN5	YDL147W	MRPL11	P36521	249 aa	Predicted RBP	2.4	□□□□□ -2.03
RPN5	YDL147W	AIM11	P87275	137 aa		2.4	□□□□□ -2.03
RPN5	YDL147W	SAE3	P89114	91 aa		2.4	□□□□□ -2.03
RPN5	YDL147W	PFY1	P07274	126 aa		2.39	□□□□□ -2.03
RPN5	YDL147W	RPL37A	P49166	88 aa	Known RBP	2.38	□□□□□ -2.03
RPN5	YDL147W	FRQ1	Q06389	190 aa		2.38	□□□□□ -2.03
RPN5	YDL147W	LCL2	Q08045	131 aa		2.38	□□□□□ -2.03
RPN5	YDL147W	HAP2	P06774	265 aa		2.37	□□□□□ -2.03
RPN5	YDL147W	YLR296W	Q05898	108 aa		2.37	□□□□□ -2.03
RPN5	YDL147W	YOR072W	Q08486	104 aa		2.37	□□□□□ -2.03
RPN5	YDL147W	YLR118C	Q12354	227 aa		2.37	□□□□□ -2.03
RPN5	YDL147W	YJL009W	P47078	108 aa		2.36	□□□□□ -2.03
RPN5	YDL147W	KTI11	Q3E840	82 aa		2.36	□□□□□ -2.03
RPN5	YDL147W	MYO2	P19524	1574 aa	Known RBP	2.35	□□□□□ -2.03
RPN5	YDL147W	ERV14	P53173	138 aa		2.35	□□□□□ -2.03
RPN5	YDL147W	YLR099W-A	Q3E798	87 aa		2.35	□□□□□ -2.03
RPN5	YDL147W	RPL40A	P0CH08	128 aa	Known RBP	2.34	□□□□□ -2.04
RPN5	YDL147W	RPL40B	P0CH09	128 aa	Known RBP	2.34	□□□□□ -2.04
RPN5	YDL147W	SEC59	P20048	519 aa		2.34	□□□□□ -2.04
RPN5	YDL147W	UTP11	P34247	250 aa	Predicted RBP	2.34	□□□□□ -2.04
RPN5	YDL147W	YOL013W-A	P0C272	63 aa	Predicted RBP	2.33	□□□□□ -2.04
RPN5	YDL147W	APS2	Q00381	147 aa		2.33	□□□□□ -2.04
RPN5	YDL147W	COA4	Q05809	96 aa		2.33	□□□□□ -2.04
RPN5	YDL147W	GTT2	Q12390	233 aa		2.33	□□□□□ -2.04
RPN5	YDL147W	WIP1	Q2V2P8	89 aa		2.33	□□□□□ -2.04
RPN5	YDL147W	RPL36B	O14455	100 aa	Known RBP	2.32	□□□□□ -2.04
RPN5	YDL147W	RPL36A	P05745	100 aa	Predicted RBP	2.32	□□□□□ -2.04
RPN5	YDL147W	UGX2	P32772	223 aa		2.32	□□□□□ -2.04
RPN5	YDL147W	AIM36	Q03798	255 aa		2.32	□□□□□ -2.04
RPN5	YDL147W	PRM3	Q08931	133 aa		2.32	□□□□□ -2.04
RPN5	YDL147W	RTC6	O14464	93 aa		2.31	□□□□□ -2.04
RPN5	YDL147W	RPS22A	P0C0W1	130 aa	Known RBP	2.3	□□□□□ -2.04
RPN5	YDL147W	AIM18	P38884	321 aa		2.3	□□□□□ -2.04
RPN5	YDL147W	MGR2	Q02889	113 aa		2.3	□□□□□ -2.04
RPN5	YDL147W	RPS22B	Q3E7Y3	130 aa	Known RBP	2.3	□□□□□ -2.04
RPN5	YDL147W	GSP1	P32835	219 aa	Known RBP	2.29	□□□□□ -2.04
RPN5	YDL147W	YKL044W	P36092	106 aa		2.28	□□□□□ -2.04
RPN5	YDL147W	RPB11	P38902	120 aa		2.28	□□□□□ -2.04
RPN5	YDL147W	LDB18	Q07887	179 aa		2.28	□□□□□ -2.04
RPN5	YDL147W	GSC2	P40989	1895 aa		2.28	□□□□□ -2.04
RPN5	YDL147W	ROM2	P51862	1356 aa	Known RBP	2.28	□□□□□ -2.05
RPN5	YDL147W	RPO41	P13433	1351 aa	Known RBP	2.27	□□□□□ -2.05
RPN5	YDL147W	YIR021W-A	Q3E739	70 aa		2.26	□□□□□ -2.05
RPN5	YDL147W	SPC24	Q04477	213 aa		2.25	□□□□□ -2.05
RPN5	YDL147W	SNT2	P53127	1403 aa		2.25	□□□□□ -2.05
RPN5	YDL147W	YOR376W-A	Q3E805	51 aa		2.24	□□□□□ -2.05
RPN5	YDL147W	MED11	Q99278	115 aa		2.24	□□□□□ -2.05
RPN5	YDL147W	SNF11	P38956	169 aa		2.23	□□□□□ -2.05
RPN5	YDL147W	GPI19	Q04082	140 aa		2.23	□□□□□ -2.05
RPN5	YDL147W	COA6	Q3E846	104 aa		2.23	□□□□□ -2.05
RPN5	YDL147W	ECM5	Q03214	1411 aa		2.23	□□□□□ -2.05
RPN5	YDL147W	TRM732	Q03496	1420 aa		2.23	□□□□□ -2.05
RPN5	YDL147W	AIM4	P38305	123 aa	Predicted RBP	2.22	□□□□□ -2.05
RPN5	YDL147W	HPA2	Q06592	156 aa		2.22	□□□□□ -2.05
RPN5	YDL147W	FCF2	Q12035	217 aa	Predicted RBP	2.22	□□□□□ -2.05
RPN5	YDL147W	YSF3	P0C074	85 aa	Predicted RBP	2.21	□□□□□ -2.06
RPN5	YDL147W	YCR099C	P25657	155 aa		2.21	□□□□□ -2.06
RPN5	YDL147W	YOR097C	Q12274	175 aa	Predicted RBP	2.21	□□□□□ -2.06
RPN5	YDL147W	YHR213W-B	Q8TGK1	99 aa		2.21	□□□□□ -2.06
RPN5	YDL147W	YFR035C	P43608	114 aa		2.2	□□□□□ -2.06
RPN5	YDL147W	RPL37B	P51402	88 aa	Known RBP	2.2	□□□□□ -2.06
RPN5	YDL147W	YJL197C-A	P0C5P0	93 aa		2.18	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 101.9 ms