RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W VMA9Q3E7B6 73 aa3.33□□□□□ -1.88
PTC1YDL006W YMR316C-AI2HB70 103 aa3.32□□□□□ -1.88
PTC1YDL006W CUP2P15315 225 aa3.32□□□□□ -1.88
PTC1YDL006W ALK2P32789 676 aaPredicted RBP3.32□□□□□ -1.88
PTC1YDL006W YKL070WP36087 169 aa3.32□□□□□ -1.88
PTC1YDL006W RPL14AP36105 138 aaKnown RBP3.32□□□□□ -1.88
PTC1YDL006W RPL14BP38754 138 aaKnown RBP3.32□□□□□ -1.88
PTC1YDL006W DOG2P38773 246 aa3.32□□□□□ -1.88
PTC1YDL006W DOG1P38774 246 aa3.32□□□□□ -1.88
PTC1YDL006W YAR068WP39564 161 aa3.32□□□□□ -1.88
PTC1YDL006W YIA6P40556 373 aa3.32□□□□□ -1.88
PTC1YDL006W PAU4P53427 120 aa3.32□□□□□ -1.88
PTC1YDL006W ATC1Q04005 294 aa3.32□□□□□ -1.88
PTC1YDL006W PAU1P0CE88 120 aa3.31□□□□□ -1.88
PTC1YDL006W PAU14P0CE89 120 aa3.31□□□□□ -1.88
PTC1YDL006W PAU6P0CE90 120 aa3.31□□□□□ -1.88
PTC1YDL006W PAU18P0CE91 120 aa3.31□□□□□ -1.88
PTC1YDL006W PAU8P0CE92 120 aa3.31□□□□□ -1.88
PTC1YDL006W PAU11P0CE93 120 aa3.31□□□□□ -1.88
PTC1YDL006W CPT1P17898 393 aa3.31□□□□□ -1.88
PTC1YDL006W CSH1P38287 376 aa3.31□□□□□ -1.88
PTC1YDL006W PAU13P38725 120 aa3.31□□□□□ -1.88
PTC1YDL006W PET100P38958 111 aa3.31□□□□□ -1.88
PTC1YDL006W EDC2P40023 145 aaPredicted RBP3.31□□□□□ -1.88
PTC1YDL006W SWT21P53873 357 aaPredicted RBP3.31□□□□□ -1.88
PTC1YDL006W PAU10Q03050 120 aa3.31□□□□□ -1.88
PTC1YDL006W SPG4Q04438 115 aa3.31□□□□□ -1.88
PTC1YDL006W AVO2Q04749 426 aa3.31□□□□□ -1.88
PTC1YDL006W PAU20Q08322 120 aa3.31□□□□□ -1.88
PTC1YDL006W PAU9Q3E770 120 aa3.31□□□□□ -1.88
PTC1YDL006W PCC1Q3E833 88 aa3.31□□□□□ -1.88
PTC1YDL006W CDC7P06243 507 aa3.3□□□□□ -1.88
PTC1YDL006W SEC59P20048 519 aa3.3□□□□□ -1.88
PTC1YDL006W HSP12P22943 109 aaKnown RBP3.3□□□□□ -1.88
PTC1YDL006W POG1P40473 351 aa3.3□□□□□ -1.88
PTC1YDL006W CPD1P53314 239 aa3.3□□□□□ -1.88
PTC1YDL006W IRC23Q08416 157 aa3.3□□□□□ -1.88
PTC1YDL006W TDH1P00360 332 aaKnown RBP3.29□□□□□ -1.88
PTC1YDL006W PET494P07390 489 aaPredicted RBP3.29□□□□□ -1.88
PTC1YDL006W SFT2P38166 215 aa3.29□□□□□ -1.88
PTC1YDL006W TRS20P38334 175 aa3.29□□□□□ -1.88
PTC1YDL006W VPS55P47111 140 aa3.29□□□□□ -1.88
PTC1YDL006W DSK2P48510 373 aa3.29□□□□□ -1.88
PTC1YDL006W TOS8P53147 276 aa3.29□□□□□ -1.88
PTC1YDL006W CAX4P53223 239 aa3.29□□□□□ -1.88
PTC1YDL006W CAB4P53332 305 aa3.29□□□□□ -1.88
PTC1YDL006W HOR7Q05827 59 aa3.29□□□□□ -1.88
PTC1YDL006W ARC18Q05933 178 aaKnown RBP3.29□□□□□ -1.88
PTC1YDL006W LOA1Q06508 300 aa3.29□□□□□ -1.88
PTC1YDL006W RPS22AP0C0W1 130 aaKnown RBP3.28□□□□□ -1.88
PTC1YDL006W CNB1P25296 175 aa3.28□□□□□ -1.88
PTC1YDL006W SNU13P39990 126 aaKnown RBP3.28□□□□□ -1.88
PTC1YDL006W POR2P40478 281 aa3.28□□□□□ -1.88
PTC1YDL006W YGR219WP53307 113 aa3.28□□□□□ -1.88
PTC1YDL006W UBC7Q02159 165 aa3.28□□□□□ -1.88
PTC1YDL006W SNO1Q03144 224 aa3.28□□□□□ -1.88
PTC1YDL006W YMR253CQ04835 414 aa3.28□□□□□ -1.88
PTC1YDL006W ZEO1Q08245 113 aa3.28□□□□□ -1.88
PTC1YDL006W POM33Q12164 279 aa3.28□□□□□ -1.88
PTC1YDL006W COX2P00410 251 aa3.27□□□□□ -1.89
PTC1YDL006W ADH3P07246 375 aaKnown RBP3.27□□□□□ -1.89
PTC1YDL006W SPT4P32914 102 aaPredicted RBP3.27□□□□□ -1.89
PTC1YDL006W MIC12P38341 106 aa3.27□□□□□ -1.89
PTC1YDL006W CYB5P40312 120 aa3.27□□□□□ -1.89
PTC1YDL006W PGD1P40356 397 aa3.27□□□□□ -1.89
PTC1YDL006W PHS1P40857 217 aa3.27□□□□□ -1.89
PTC1YDL006W TIM21P53220 239 aa3.27□□□□□ -1.89
PTC1YDL006W DAD3P69850 94 aa3.27□□□□□ -1.89
PTC1YDL006W YML108WQ03759 105 aa3.27□□□□□ -1.89
PTC1YDL006W DPP1Q05521 289 aa3.27□□□□□ -1.89
PTC1YDL006W FIT2Q08906 153 aa3.27□□□□□ -1.89
PTC1YDL006W DDI2P0CH63 225 aa3.26□□□□□ -1.89
PTC1YDL006W DDI3P0CH64 225 aa3.26□□□□□ -1.89
PTC1YDL006W YHR213WP0CI67 198 aa3.26□□□□□ -1.89
PTC1YDL006W RPB3P16370 318 aaKnown RBP3.26□□□□□ -1.89
PTC1YDL006W RNA15P25299 296 aaPredicted RBP3.26□□□□□ -1.89
PTC1YDL006W PRY2P36110 329 aa3.26□□□□□ -1.89
PTC1YDL006W ATG8P38182 117 aaRIP-Chip data3.26□□□□□ -1.89not detected
PTC1YDL006W LSM2P38203 95 aaKnown RBP3.26□□□□□ -1.89
PTC1YDL006W YHR173CP38864 112 aa3.26□□□□□ -1.89
PTC1YDL006W SNF11P38956 169 aa3.26□□□□□ -1.89
PTC1YDL006W YNL194CP40169 301 aa3.26□□□□□ -1.89
PTC1YDL006W VMA21P41806 77 aa3.26□□□□□ -1.89
PTC1YDL006W MOG1P47123 218 aa3.26□□□□□ -1.89
PTC1YDL006W TIM11P81449 96 aaPredicted RBP3.26□□□□□ -1.89
PTC1YDL006W NAT3Q06504 195 aa3.26□□□□□ -1.89
PTC1YDL006W MSA1Q08471 629 aa3.26□□□□□ -1.89
PTC1YDL006W PRM3Q08931 133 aa3.26□□□□□ -1.89
PTC1YDL006W YAL063C-AQ3E791 96 aa3.26□□□□□ -1.89
PTC1YDL006W YGR035W-AQ45U48 73 aa3.26□□□□□ -1.89
PTC1YDL006W MRS1P07266 363 aa3.25□□□□□ -1.89
PTC1YDL006W NTF2P33331 125 aaKnown RBP3.25□□□□□ -1.89
PTC1YDL006W HSP10P38910 106 aa3.25□□□□□ -1.89
PTC1YDL006W YIL163CP40448 117 aa3.25□□□□□ -1.89
PTC1YDL006W YJL027CP47063 138 aaPredicted RBP3.25□□□□□ -1.89
PTC1YDL006W MGA1P53050 456 aa3.25□□□□□ -1.89
PTC1YDL006W SMT3Q12306 101 aaKnown RBP3.25□□□□□ -1.89
PTC1YDL006W FMP49A0A023PZB3 126 aa3.24□□□□□ -1.89
PTC1YDL006W YKL102CP34249 101 aa3.24□□□□□ -1.89
PTC1YDL006W RPA43P46669 326 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms