RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeast

Gene RPB5, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB5	YBR154C	SEN15	Q04675	128 aa		0.99	□□□□□ -2.25
RPB5	YBR154C	Q0144	Q9ZZW2	109 aa		0.99	□□□□□ -2.25
RPB5	YBR154C	RPL33A	P05744	107 aa	Known RBP	0.98	□□□□□ -2.25
RPB5	YBR154C	MRP49	P32388	137 aa		0.98	□□□□□ -2.25
RPB5	YBR154C	SFT2	P38166	215 aa		0.98	□□□□□ -2.25
RPB5	YBR154C	SFT1	P43682	97 aa		0.98	□□□□□ -2.25
RPB5	YBR154C	YGL149W	P53116	101 aa		0.98	□□□□□ -2.25
RPB5	YBR154C	MPC1	P53157	130 aa	Known RBP	0.98	□□□□□ -2.25
RPB5	YBR154C	SED1	Q01589	338 aa		0.98	□□□□□ -2.25
RPB5	YBR154C	YPL067C	Q02754	198 aa		0.98	□□□□□ -2.25
RPB5	YBR154C	SDH7	Q04401	133 aa		0.98	□□□□□ -2.25
RPB5	YBR154C	CCW12	Q12127	133 aa		0.98	□□□□□ -2.25
RPB5	YBR154C	RIF1	P29539	1916 aa		0.97	□□□□□ -2.25
RPB5	YBR154C	YGL014C-A	P0C5N1	53 aa		0.97	□□□□□ -2.25
RPB5	YBR154C	HSP10	P38910	106 aa		0.97	□□□□□ -2.25
RPB5	YBR154C	VMA7	P39111	118 aa		0.97	□□□□□ -2.25
RPB5	YBR154C	YAR064W	P39563	99 aa		0.97	□□□□□ -2.25
RPB5	YBR154C	HUA1	P40325	198 aa		0.97	□□□□□ -2.25
RPB5	YBR154C	LCL2	Q08045	131 aa		0.97	□□□□□ -2.25
RPB5	YBR154C	SLO1	Q3E784	85 aa		0.97	□□□□□ -2.25
RPB5	YBR154C	NMT1	P14743	455 aa		0.96	□□□□□ -2.26
RPB5	YBR154C	SRL3	P36167	246 aa		0.96	□□□□□ -2.26
RPB5	YBR154C	YIL102C	P40488	101 aa		0.96	□□□□□ -2.26
RPB5	YBR154C	BRP1	P53194	125 aa		0.96	□□□□□ -2.26
RPB5	YBR154C	SAE3	P89114	91 aa		0.96	□□□□□ -2.26
RPB5	YBR154C	PAU21	P0CE86	164 aa		0.95	□□□□□ -2.26
RPB5	YBR154C	PAU22	P0CE87	164 aa		0.95	□□□□□ -2.26
RPB5	YBR154C	RPL40A	P0CH08	128 aa	Known RBP	0.95	□□□□□ -2.26
RPB5	YBR154C	RPL40B	P0CH09	128 aa	Known RBP	0.95	□□□□□ -2.26
RPB5	YBR154C	HAP3	P13434	144 aa		0.95	□□□□□ -2.26
RPB5	YBR154C	ANB1	P19211	157 aa		0.95	□□□□□ -2.26
RPB5	YBR154C	YCR001W	P25347	104 aa		0.95	□□□□□ -2.26
RPB5	YBR154C	UTP11	P34247	250 aa	Predicted RBP	0.95	□□□□□ -2.26
RPB5	YBR154C	MRPL11	P36521	249 aa	Predicted RBP	0.95	□□□□□ -2.26
RPB5	YBR154C	YMR122C	Q03879	124 aa		0.95	□□□□□ -2.26
RPB5	YBR154C	YLR099W-A	Q3E798	87 aa		0.95	□□□□□ -2.26
RPB5	YBR154C	KTI11	Q3E840	82 aa		0.95	□□□□□ -2.26
RPB5	YBR154C	HSL1	P34244	1518 aa		0.94	□□□□□ -2.26
RPB5	YBR154C	HAP2	P06774	265 aa		0.94	□□□□□ -2.26
RPB5	YBR154C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.94	□□□□□ -2.26
RPB5	YBR154C	YHR213W	P0CI67	198 aa		0.94	□□□□□ -2.26
RPB5	YBR154C	GAT4	P40569	121 aa		0.94	□□□□□ -2.26
RPB5	YBR154C	LST8	P41318	303 aa		0.94	□□□□□ -2.26
RPB5	YBR154C	YNL122C	P53921	115 aa	Predicted RBP	0.94	□□□□□ -2.26
RPB5	YBR154C	IRC21	Q04772	201 aa		0.94	□□□□□ -2.26
RPB5	YBR154C	FRQ1	Q06389	190 aa		0.94	□□□□□ -2.26
RPB5	YBR154C	YLR118C	Q12354	227 aa		0.94	□□□□□ -2.26
RPB5	YBR154C	GTT2	Q12390	233 aa		0.94	□□□□□ -2.26
RPB5	YBR154C	WIP1	Q2V2P8	89 aa		0.94	□□□□□ -2.26
RPB5	YBR154C	SEC59	P20048	519 aa		0.93	□□□□□ -2.26
RPB5	YBR154C	UGX2	P32772	223 aa		0.93	□□□□□ -2.26
RPB5	YBR154C	ERV14	P53173	138 aa		0.93	□□□□□ -2.26
RPB5	YBR154C	AIM11	P87275	137 aa		0.93	□□□□□ -2.26
RPB5	YBR154C	YLR296W	Q05898	108 aa		0.93	□□□□□ -2.26
RPB5	YBR154C	YOR072W	Q08486	104 aa		0.93	□□□□□ -2.26
RPB5	YBR154C	PRM3	Q08931	133 aa		0.93	□□□□□ -2.26
RPB5	YBR154C	MYO2	P19524	1574 aa	Known RBP	0.92	□□□□□ -2.26
RPB5	YBR154C	PFY1	P07274	126 aa		0.92	□□□□□ -2.26
RPB5	YBR154C	RPL37A	P49166	88 aa	Known RBP	0.92	□□□□□ -2.26
RPB5	YBR154C	APS2	Q00381	147 aa		0.92	□□□□□ -2.26
RPB5	YBR154C	AIM36	Q03798	255 aa		0.92	□□□□□ -2.26
RPB5	YBR154C	COA4	Q05809	96 aa		0.92	□□□□□ -2.26
RPB5	YBR154C	RPL36B	O14455	100 aa	Known RBP	0.91	□□□□□ -2.26
RPB5	YBR154C	RTC6	O14464	93 aa		0.91	□□□□□ -2.26
RPB5	YBR154C	RPL36A	P05745	100 aa	Predicted RBP	0.91	□□□□□ -2.26
RPB5	YBR154C	RPS22A	P0C0W1	130 aa	Known RBP	0.91	□□□□□ -2.26
RPB5	YBR154C	YKL044W	P36092	106 aa		0.91	□□□□□ -2.26
RPB5	YBR154C	AIM18	P38884	321 aa		0.91	□□□□□ -2.26
RPB5	YBR154C	RPB11	P38902	120 aa		0.91	□□□□□ -2.26
RPB5	YBR154C	YJL009W	P47078	108 aa		0.91	□□□□□ -2.26
RPB5	YBR154C	SPC24	Q04477	213 aa		0.91	□□□□□ -2.26
RPB5	YBR154C	LDB18	Q07887	179 aa		0.91	□□□□□ -2.26
RPB5	YBR154C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.91	□□□□□ -2.26
RPB5	YBR154C	YOR376W-A	Q3E805	51 aa		0.91	□□□□□ -2.26
RPB5	YBR154C	ROM2	P51862	1356 aa	Known RBP	0.91	□□□□□ -2.26
RPB5	YBR154C	SLH1	P53327	1967 aa	Known RBP	0.9	□□□□□ -2.26
RPB5	YBR154C	SNT2	P53127	1403 aa		0.9	□□□□□ -2.26
RPB5	YBR154C	GSP1	P32835	219 aa	Known RBP	0.9	□□□□□ -2.27
RPB5	YBR154C	AIM4	P38305	123 aa	Predicted RBP	0.9	□□□□□ -2.27
RPB5	YBR154C	SNF11	P38956	169 aa		0.9	□□□□□ -2.27
RPB5	YBR154C	MGR2	Q02889	113 aa		0.9	□□□□□ -2.27
RPB5	YBR154C	GPI19	Q04082	140 aa		0.9	□□□□□ -2.27
RPB5	YBR154C	FCF2	Q12035	217 aa	Predicted RBP	0.9	□□□□□ -2.27
RPB5	YBR154C	MED11	Q99278	115 aa		0.9	□□□□□ -2.27
RPB5	YBR154C	CDC39	P25655	2108 aa	Known RBP	0.89	□□□□□ -2.27
RPB5	YBR154C	RPO41	P13433	1351 aa	Known RBP	0.89	□□□□□ -2.27
RPB5	YBR154C	HPA2	Q06592	156 aa		0.89	□□□□□ -2.27
RPB5	YBR154C	TRM732	Q03496	1420 aa		0.89	□□□□□ -2.27
RPB5	YBR154C	ADK1	P07170	222 aa	Known RBP	0.88	□□□□□ -2.27
RPB5	YBR154C	YSF3	P0C074	85 aa	Predicted RBP	0.88	□□□□□ -2.27
RPB5	YBR154C	HHY1	P39982	102 aa		0.88	□□□□□ -2.27
RPB5	YBR154C	TDA2	P40045	126 aa		0.88	□□□□□ -2.27
RPB5	YBR154C	YIR021W-A	Q3E739	70 aa		0.88	□□□□□ -2.27
RPB5	YBR154C	YHR213W-B	Q8TGK1	99 aa		0.88	□□□□□ -2.27
RPB5	YBR154C	YOR304C-A	O14468	76 aa		0.87	□□□□□ -2.27
RPB5	YBR154C	YBR013C	P38215	129 aa		0.87	□□□□□ -2.27
RPB5	YBR154C	YFR035C	P43608	114 aa		0.87	□□□□□ -2.27
RPB5	YBR154C	MIC27	P50945	234 aa		0.87	□□□□□ -2.27
RPB5	YBR154C	YLR194C	Q05777	254 aa		0.87	□□□□□ -2.27
RPB5	YBR154C	YLR042C	Q07990	161 aa		0.87	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 140 ms