RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PUF60Q9UHX1 559 aaKnown RBP18.3■□□□□ 0.52
PHGDH-234ENST00000642041 GINS2Q9Y248 185 aa18.3■□□□□ 0.52
PHGDH-234ENST00000642041 FNDC1Q4ZHG4 1894 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-234ENST00000642041 FANCMQ8IYD8 2048 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 MACROD2A1Z1Q3 448 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 CTAGE15A4D2H0 777 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 DDX3XO00571 662 aaKnown RBP eCLIP18.29■□□□□ 0.527e-18■■■□□ 16.8
PHGDH-234ENST00000642041 MED7O43513 233 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 CTAGE8P0CG41 777 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 HARSP12081 509 aaKnown RBP18.29■□□□□ 0.52
PHGDH-234ENST00000642041 PAFAH1B1P43034 410 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 RBP5P82980 135 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 PLCB3Q01970 1234 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 MYO1EQ12965 1108 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 ENOX2Q16206 610 aaKnown RBP18.29■□□□□ 0.52
PHGDH-234ENST00000642041 KIAA0319Q5VV43 1072 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 GJB7Q6PEY0 223 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 CTAGE6Q86UF2 777 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 CTAGE4Q8IX94 777 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 ZSWIM2Q8NEG5 633 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 EPS8L1Q8TE68 723 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 ZNF668Q96K58 619 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-234ENST00000642041 KREMEN1Q96MU8 473 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 TCF25Q9BQ70 676 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 SELENOOQ9BVL4 669 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 ENTPD7Q9NQZ7 604 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 UVRAGQ9P2Y5 699 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 PADI3Q9ULW8 664 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 HYOU1Q9Y4L1 999 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 CEP83Q9Y592 693 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 PCDHB7Q9Y5E2 793 aa18.29■□□□□ 0.52
PHGDH-234ENST00000642041 PKD1L2Q7Z442 2459 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 TULP1O00294 542 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-234ENST00000642041 GPR182O15218 404 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 SKIP12755 728 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 KRT5P13647 590 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 PNPLA4P41247 253 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 NOP2P46087 812 aaKnown RBP18.28■□□□□ 0.52
PHGDH-234ENST00000642041 TFAMQ00059 246 aaKnown RBP18.28■□□□□ 0.52
PHGDH-234ENST00000642041 TMEM132DQ14C87 1099 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 STILQ15468 1287 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 ZNF667Q5HYK9 610 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 GLYCTKQ8IVS8 523 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 SIX5Q8N196 739 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 PDCL2Q8N4E4 241 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 MSANTD4Q8NCY6 345 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 GOLGA1Q92805 767 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 MIS12Q9H081 205 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 PDCL3Q9H2J4 239 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 MINDY3Q9H8M7 445 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 ARGLU1Q9NWB6 273 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-234ENST00000642041 HCFC2Q9Y5Z7 792 aa18.28■□□□□ 0.52
PHGDH-234ENST00000642041 NCANO14594 1321 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 FAM208BQ5VWN6 2430 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 TBKBP1A7MCY6 615 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 LRRN2O75325 713 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 LSM8O95777 96 aaKnown RBP18.27■□□□□ 0.52
PHGDH-234ENST00000642041 CYP3A5P20815 502 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 ATXN1P54253 815 aaKnown RBP18.27■□□□□ 0.52
PHGDH-234ENST00000642041 SNX16P57768 344 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 APBA1Q02410 837 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 TDGQ13569 410 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 ZNF699Q32M78 642 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 KIAA1841Q6NSI8 718 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 BEST2Q8NFU1 509 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 RABGGTAQ92696 567 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 FAM212AQ96EL1 285 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 PBKQ96KB5 322 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 MRPL47Q9HD33 250 aaKnown RBP18.27■□□□□ 0.52
PHGDH-234ENST00000642041 SEPT11Q9NVA2 429 aaKnown RBP18.27■□□□□ 0.52
PHGDH-234ENST00000642041 NOCTQ9UK39 431 aaKnown RBP18.27■□□□□ 0.52
PHGDH-234ENST00000642041 FBXL21Q9UKT6 434 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 SNX12Q9UMY4 172 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 DUSP12Q9UNI6 340 aa18.27■□□□□ 0.52
PHGDH-234ENST00000642041 CYP26A1O43174 497 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 MTA2O94776 668 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 VNN1O95497 513 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 EOMESO95936 686 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 PAEPP09466 180 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 WEE2P0C1S8 567 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 LAG3P18627 525 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 GALCP54803 685 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 PAK2Q13177 524 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 PPP2R5EQ16537 467 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 ATAT1Q5SQI0 421 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 LIN9Q5TKA1 542 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 EEF1DP3Q658K8 133 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 ACAD10Q6JQN1 1059 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 GPR161Q8N6U8 529 aaKnown RBP18.26■□□□□ 0.51
PHGDH-234ENST00000642041 RIN2Q8WYP3 895 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-234ENST00000642041 TATDN2Q93075 761 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 CWH43Q9H720 699 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 AVENQ9NQS1 362 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-234ENST00000642041 GTF3C4Q9UKN8 822 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 UBQLN1Q9UMX0 589 aaKnown RBP18.26■□□□□ 0.51
PHGDH-234ENST00000642041 PCDHB4Q9Y5E5 795 aa18.26■□□□□ 0.51
PHGDH-234ENST00000642041 GRID2IPA4D2P6 1211 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 RCCD1A6NED2 376 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 LACTBL1A8MY62 500 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 MIF4GDA9UHW6 222 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms