RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 LMNB2Q03252 620 aa17.93■□□□□ 0.46
PHGDH-213ENST00000641272 MAMSTRQ6ZN01 415 aa17.93■□□□□ 0.46
PHGDH-213ENST00000641272 SPATA2LQ8IUW3 424 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-213ENST00000641272 CHFRQ96EP1 664 aa17.93■□□□□ 0.46
PHGDH-213ENST00000641272 ANKRD36BP1Q96IX9 119 aa17.93■□□□□ 0.46
PHGDH-213ENST00000641272 ACBD6Q9BR61 282 aa17.93■□□□□ 0.46
PHGDH-213ENST00000641272 POLR3BQ9NW08 1133 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-213ENST00000641272 EML5Q05BV3 1969 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 ATP2C2O75185 946 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 WEE1P30291 646 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 ASIC1P78348 528 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 RBP5P82980 135 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 RUNX3Q13761 415 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 SOWAHAQ2M3V2 549 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 FOXD4L6Q3SYB3 417 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-213ENST00000641272 FSTL4Q6MZW2 842 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 FOXD4L3Q6VB84 417 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-213ENST00000641272 CEP68Q76N32 757 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 LONP2Q86WA8 852 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 TMEM86AQ8N2M4 240 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 MYLPFQ96A32 169 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 DHX58Q96C10 678 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 SLC22A12Q96S37 553 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 FAM83CQ9BQN1 747 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 SYT15Q9BQS2 421 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 TMEM206Q9H813 350 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 KIF9Q9HAQ2 790 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 TDP1Q9NUW8 608 aa17.92■□□□□ 0.46
PHGDH-213ENST00000641272 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-213ENST00000641272 DCDC2BA2VCK2 349 aa17.91■□□□□ 0.46
PHGDH-213ENST00000641272 K7ELQ4 463 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-213ENST00000641272 NOL4O94818 638 aa17.91■□□□□ 0.46
PHGDH-213ENST00000641272 PAPSS2O95340 614 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-213ENST00000641272 EGFP01133 1207 aa17.91■□□□□ 0.46
PHGDH-213ENST00000641272 TNNC2P02585 160 aa17.91■□□□□ 0.46
PHGDH-213ENST00000641272 CKMP06732 381 aa17.91■□□□□ 0.46
PHGDH-213ENST00000641272 DDX6P26196 483 aaKnown RBP eCLIP17.91■□□□□ 0.46
PHGDH-213ENST00000641272 ATXN1P54253 815 aaKnown RBP17.91■□□□□ 0.46
PHGDH-213ENST00000641272 RPL10AP62906 217 aaKnown RBP17.91■□□□□ 0.46
PHGDH-213ENST00000641272 TOP6BLQ8N6T0 577 aa17.91■□□□□ 0.46
PHGDH-213ENST00000641272 GPR161Q8N6U8 529 aaKnown RBP17.91■□□□□ 0.46
PHGDH-213ENST00000641272 LINC00301Q8NCQ3 95 aa17.91■□□□□ 0.46
PHGDH-213ENST00000641272 KBTBD7Q8WVZ9 684 aa17.91■□□□□ 0.46
PHGDH-213ENST00000641272 TNMDQ9H2S6 317 aa17.91■□□□□ 0.46
PHGDH-213ENST00000641272 ABCB6Q9NP58 842 aa17.91■□□□□ 0.46
PHGDH-213ENST00000641272 INTS13Q9NVM9 706 aa17.91■□□□□ 0.46
PHGDH-213ENST00000641272 GDAP2Q9NXN4 497 aa17.91■□□□□ 0.46
PHGDH-213ENST00000641272 HSPBP1Q9NZL4 362 aa17.91■□□□□ 0.46
PHGDH-213ENST00000641272 TFIP11Q9UBB9 837 aaKnown RBP17.91■□□□□ 0.46
PHGDH-213ENST00000641272 R3HCC1Q9Y3T6 440 aaKnown RBP17.91■□□□□ 0.46
PHGDH-213ENST00000641272 WNT6Q9Y6F9 365 aa17.91■□□□□ 0.46
PHGDH-213ENST00000641272 SPTLC2O15270 562 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 RNF40O75150 1001 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 PCSK1P29120 753 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 CASP1P29466 404 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 HOXD13P35453 343 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 CYP2J2P51589 502 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 USP4Q13107 963 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 MTF1Q14872 753 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 E2F4Q16254 413 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 CC2D1AQ6P1N0 951 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-213ENST00000641272 MON1AQ86VX9 555 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 NELFCDQ8IXH7 590 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 RDH13Q8NBN7 331 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 INTS4Q96HW7 963 aaKnown RBP17.9■□□□□ 0.46
PHGDH-213ENST00000641272 HPDLQ96IR7 371 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 CYP2S1Q96SQ9 504 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 TRIM9Q9C026 710 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 ZSCAN16Q9H4T2 348 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-213ENST00000641272 SPTBN2O15020 2390 aa17.9■□□□□ 0.46
PHGDH-213ENST00000641272 C2orf78A6NCI8 922 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 ZNF233A6NK53 670 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 RETP07949 1114 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 PDGFRBP09619 1106 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 LMO2P25791 158 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 LHX1P48742 406 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 GRSF1Q12849 480 aaKnown RBP eCLIP17.89■□□□□ 0.45
PHGDH-213ENST00000641272 MYO1EQ12965 1108 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 ZNF77Q15935 545 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 CCDC6Q16204 474 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 TMEM196Q5HYL7 178 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 FAM26FQ5R3K3 315 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 STXBP4Q6ZWJ1 553 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 FAM160A2Q8N612 972 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-213ENST00000641272 ARL14EPQ8N8R7 260 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-213ENST00000641272 TRMT2BQ96GJ1 504 aaKnown RBP17.89■□□□□ 0.45
PHGDH-213ENST00000641272 HHIPQ96QV1 700 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 FBRSL1Q9HCM7 1045 aaKnown RBP17.89■□□□□ 0.45
PHGDH-213ENST00000641272 CRTAC1Q9NQ79 661 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 SEMA4GQ9NTN9 838 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 UXTQ9UBK9 157 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-213ENST00000641272 ZMYM5Q9UJ78 669 aa17.89■□□□□ 0.45
PHGDH-213ENST00000641272 MORC2Q9Y6X9 1032 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-213ENST00000641272 TRAV19A0A0A6YYK7 116 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.88■□□□□ 0.45
PHGDH-213ENST00000641272 PRR5-ARHGAP8B1AHC4 643 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 GABRDO14764 452 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 CLIC2O15247 247 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 DLATP10515 647 aaKnown RBP17.88■□□□□ 0.45
PHGDH-213ENST00000641272 KCNA4P22459 653 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms