RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 PPP1R10Q96QC0 940 aaKnown RBP10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 PLIN2Q99541 437 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 TTPALQ9BTX7 342 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 TARS2Q9BW92 718 aaKnown RBP10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 SPATA9Q9BWV2 254 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 CCSER1Q9C0I3 900 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 CDT1Q9H211 546 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 CXCL16Q9H2A7 254 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 CBX8Q9HC52 389 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 MAN1C1Q9NR34 630 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 SLC38A7Q9NVC3 462 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 TMEM221A6NGB7 291 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 C2CD4DB7Z1M9 353 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 M0R296 226 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 ABLIM1O14639 778 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 TGM5O43548 720 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 B3GAT3O94766 335 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 WEE2P0C1S8 567 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 MYCLP1P12525 358 aaPredicted RBP10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 KCNE1P15382 129 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 SYT1P21579 422 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 ABCD1P33897 745 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 DDIT3P35638 169 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 NCKAP1LP55160 1127 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 TBX4P57082 545 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 GPLD1P80108 840 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 UPP1Q16831 310 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 HGSNATQ68CP4 663 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 OTOP3Q7RTS5 596 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 DDX42Q86XP3 938 aaKnown RBP eCLIP10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 PALB2Q86YC2 1186 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 UBALD2Q8IYN6 164 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 TDRD5Q8NAT2 981 aaKnown RBP10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 LNX1Q8TBB1 728 aaPredicted RBP10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 ZSCAN16Q9H4T2 348 aaPredicted RBP10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 ZDHHC7Q9NXF8 308 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 CDH22Q9UJ99 828 aa10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 MTCL1Q9Y4B5 1905 aaKnown RBP10.7□□□□□ -0.7
HNRNPC-228ENST00000557033 MYH11P35749 1972 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 A0A087X0B3 334 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 CLDN3O15551 220 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 FGFR3P22607 806 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 RPL9P32969 192 aaKnown RBP10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 PLA2G5P39877 138 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 CLCNKBP51801 687 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 ZNF131P52739 623 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 PTPAQ15257 358 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 KYAT1Q16773 422 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 ZC3H12BQ5HYM0 836 aaKnown RBP10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 RTP2Q5QGT7 225 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 CCDC149Q6ZUS6 474 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 HFE2Q6ZVN8 426 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 RTL10Q7L3V2 364 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 HAUS6Q7Z4H7 955 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 CEP57Q86XR8 500 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 RASSF8Q8NHQ8 419 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 RAD54LQ92698 747 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 STAMQ92783 540 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 RNF166Q96A37 237 aaPredicted RBP10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 FAM122AQ96E09 287 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 B3GALT6Q96L58 329 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 C8orf48Q96LL4 319 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 CLSTN3Q9BQT9 956 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 CAAP1Q9H8G2 361 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 PLEKHA5Q9HAU0 1116 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 WDR6Q9NNW5 1121 aaKnown RBP10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 BLOC1S4Q9NUP1 217 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 CACNG4Q9UBN1 327 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 CCDC39Q9UFE4 941 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 SORCS3Q9UPU3 1222 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 SRPRBQ9Y5M8 271 aaKnown RBP10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 CLIC4Q9Y696 253 aa10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 MORC2Q9Y6X9 1032 aaPredicted RBP10.69□□□□□ -0.7
HNRNPC-228ENST00000557033 PLXNA3P51805 1871 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 NPHP3-ACAD11A0A0J9YXS1 232 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 RFPL3O75679 317 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 SPATA31D3P0C874 917 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 PLCG1P19174 1290 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 SP100P23497 879 aaPredicted RBP10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 OSTNP61366 133 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 GRIN1Q05586 938 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 MCL1Q07820 350 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 RESTQ13127 1097 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 NOLC1Q14978 699 aaKnown RBP eCLIP10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 KARSQ15046 597 aaKnown RBP10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 PSMD5Q16401 504 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 GLRA4Q5JXX5 417 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 PERM1Q5SV97 790 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 PRSS55Q6UWB4 352 aaPredicted RBP10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 CD300LGQ6UXG3 332 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 SPATA31D4Q6ZUB0 917 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 RAB44Q7Z6P3 723 aaPredicted RBP10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 GPBP1Q86WP2 473 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 TAB3Q8N5C8 712 aaPredicted RBP10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 MYCT1Q8N699 235 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 KREMEN2Q8NCW0 462 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 HASPINQ8TF76 798 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 LARP4BQ92615 738 aaKnown RBP10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 ASIC4Q96FT7 647 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms