RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 GALK1P51570 392 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 ZXDBP98169 803 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 TSPY1Q01534 308 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 TMEM196Q5HYL7 178 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 MON1AQ86VX9 555 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 LONP2Q86WA8 852 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 NT5DC4Q86YG4 428 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 CBWD2Q8IUF1 395 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 SYCP3Q8IZU3 236 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 TTC16Q8NEE8 873 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 KBTBD7Q8WVZ9 684 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 SECISBP2LQ93073 1101 aaKnown RBP12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 MSANTD3Q96H12 275 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 CNTNAP3BQ96NU0 1288 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 ACBD6Q9BR61 282 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 CNTNAP3Q9BZ76 1288 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 UPF2Q9HAU5 1272 aaKnown RBP12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 RXFP3Q9NSD7 469 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 SEMA4GQ9NTN9 838 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 INTS13Q9NVM9 706 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 GDAP2Q9NXN4 497 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 TFIP11Q9UBB9 837 aaKnown RBP12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 CDV3Q9UKY7 258 aaKnown RBP12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 PCDHB13Q9Y5F0 798 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 PI4KAP42356 2102 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 C2orf78A6NCI8 922 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 HUS1O60921 280 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 NOL4O94818 638 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 RETP07949 1114 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 CSH1P0DML2 217 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 CSH2P0DML3 217 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 CASP1P29466 404 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 AVPR1AP37288 418 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 USP46P62068 366 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 PSMC1P62191 440 aaKnown RBP12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 PLCB2Q00722 1185 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 LMNB2Q03252 620 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 SMARCB1Q12824 385 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 PPP2R5DQ14738 602 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 CCDC73Q6ZRK6 1079 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 LIMS2Q7Z4I7 341 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 ADGRF2Q8IZF7 708 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 GPR161Q8N6U8 529 aaKnown RBP12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 LEO1Q8WVC0 666 aaPredicted RBP12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 GCNAQ96QF7 691 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 LINC00597Q9H2U6 94 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 SMOC1Q9H4F8 434 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 TRPC7Q9HCX4 862 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 CRTAC1Q9NQ79 661 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 TMEM30AQ9NV96 361 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 GCNT4Q9P109 453 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 RAB23Q9ULC3 237 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 EXOC7Q9UPT5 735 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 WNT6Q9Y6F9 365 aa12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 KMT2BQ9UMN6 2715 aaPredicted RBP12.4□□□□□ -0.42
PRPF40B-212ENST00000551111 PRR5-ARHGAP8B1AHC4 643 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 TRDMT1O14717 391 aaKnown RBP12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 AXIN1O15169 862 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 RNF40O75150 1001 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 LDHAP00338 332 aaKnown RBP12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 CST3P01034 146 aaPredicted RBP12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 CENPBP07199 599 aaPredicted RBP12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 PDGFRBP09619 1106 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 PDCP20941 246 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 GJA4P35212 333 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 PNPLA4P41247 253 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 RBP5P82980 135 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 ARHGAP8P85298 464 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 SF3A2Q15428 464 aaKnown RBP12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 ZNF77Q15935 545 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 E2F4Q16254 413 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 NFE2Q16621 373 aaPredicted RBP12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 FOXD4L5Q5VV16 416 aaPredicted RBP12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 FAM171BQ6P995 826 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 C1orf228Q6PIY5 440 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 PRR23CQ6ZRP0 262 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 KBTBD6Q86V97 674 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 WDR5BQ86VZ2 330 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 SCN4BQ8IWT1 228 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 GPD1LQ8N335 351 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 LRRC52Q8N7C0 313 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 ARL14EPQ8N8R7 260 aaPredicted RBP12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 RDH13Q8NBN7 331 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 CACTINQ8WUQ7 758 aaKnown RBP12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 FOXD4L4Q8WXT5 416 aaPredicted RBP12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 MRPS31Q92665 395 aaKnown RBP12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 ELMO3Q96BJ8 720 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 MYRFLQ96LU7 910 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 GZF1Q9H116 711 aaPredicted RBP12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 THG1LQ9NWX6 298 aaKnown RBP12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 ITGA11Q9UKX5 1188 aa12.39□□□□□ -0.43
PRPF40B-212ENST00000551111 SCAMP3O14828 347 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 CLIC2O15247 247 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 TGFB1I1O43294 461 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 TMEM191BP0C7N4 346 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 BDNFP23560 247 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 HOXA6P31267 233 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 TXLNAP40222 546 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms