RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 FAM214AQ32MH5 1076 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 EDRF1Q3B7T1 1238 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 BBS9Q3SYG4 887 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 MSS51Q4VC12 460 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 TRIM72Q6ZMU5 477 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 C3orf62Q6ZUJ4 267 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 PASD1Q8IV76 773 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 ARHGEF19Q8IW93 802 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 CTAGE3PQ8IX95 158 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 DNAJC10Q8IXB1 793 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 IFNL2Q8IZJ0 200 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 PARP8Q8N3A8 854 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 CPA5Q8WXQ8 436 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 SERAC1Q96JX3 654 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 OSBPL10Q9BXB5 764 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 IFT122Q9HBG6 1241 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 RABL2BQ9UNT1 228 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 HBS1LQ9Y450 684 aaKnown RBP7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 AP4B1Q9Y6B7 739 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 CHD1O14646 1710 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 ZMYM2Q9UBW7 1377 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 GNPATO15228 680 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 EDIL3O43854 480 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 LPXNO60711 386 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 KRT38O76015 456 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 CAMTA2O94983 1202 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 MX2P20592 715 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 SULT2A1Q06520 285 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 HIC1Q14526 733 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 PUM3Q15397 648 aaKnown RBP7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 PGS1Q32NB8 556 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 FAM219BQ5XKK7 198 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 NANOGP8Q6NSW7 305 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 C16orf46Q6P387 395 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 KCNT2Q6UVM3 1135 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 PRR23CQ6ZRP0 262 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 BTLAQ7Z6A9 289 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 ZNF410Q86VK4 478 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 HEATR4Q86WZ0 1026 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 HACE1Q8IYU2 909 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 CENPSQ8N2Z9 138 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 VGLL2Q8N8G2 317 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 ZNF564Q8TBZ8 553 aaPredicted RBP7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 DIS3LQ8TF46 1054 aaKnown RBP7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 DCUN1D1Q96GG9 259 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 NEURL2Q9BR09 285 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 EDEM3Q9BZQ6 932 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 TMEM117Q9H0C3 514 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 SAR1AQ9NR31 198 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 POLE4Q9NR33 117 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 ANAPC7Q9UJX3 599 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 PCDHA12Q9UN75 941 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 GNEQ9Y223 722 aaKnown RBP7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 CEPT1Q9Y6K0 416 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 ADGRA3Q8IWK6 1321 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 PVALEFA0A1B0GWK0 134 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 TESPA1A2RU30 521 aaPredicted RBP7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 TRIM64CA6NLI5 447 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 M0R2N6 131 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 PLOD2O00469 737 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 MED24O75448 989 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 TM7SF2O76062 418 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 MAP3K6O95382 1288 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 CYP2C9P11712 490 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 SLC5A1P13866 664 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 ITIH2P19823 946 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 PRDX5P30044 214 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 FDFT1P37268 417 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 EIF3EP60228 445 aaKnown RBP7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 CTBSQ01459 385 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 NME3Q13232 169 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 KRT81Q14533 505 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 ABCB5Q2M3G0 1257 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 EFHC1Q5JVL4 640 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 RHBDF2Q6PJF5 856 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 POTEHQ6S545 545 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 REXO1Q8N1G1 1221 aaKnown RBP7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 DTX3Q8N9I9 347 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 SNX27Q96L92 541 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 AGPAT1Q99943 283 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 TMEM121Q9BTD3 319 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 POLR3CQ9BUI4 534 aaPredicted RBP7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 KLHL25Q9H0H3 589 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 BARHL2Q9NY43 387 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 ITM2BQ9Y287 266 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 CORINQ9Y5Q5 1042 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 MRC1P22897 1456 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 C3P01024 1663 aa7.59□□□□□ -1.19
LIMCH1-207ENST00000508466 SYNGAP1Q96PV0 1343 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 C1orf232A0A0U1RR37 186 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 SMIM31A0A1B0GVY4 71 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 A0A1W2PPW3 197 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 PSMD11O00231 422 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 AIM2O14862 343 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 TYROBPO43914 113 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 FKBP6O75344 327 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 RFC1P35251 1148 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 ARSEP51690 589 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 NDST2P52849 883 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 GPC5P78333 572 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms