RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 DNM1LO00429 736 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 EFSO43281 561 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 CPNE3O75131 537 aaKnown RBP8.17□□□□□ -1.1
CDC42-205ENST00000498236 TACC1O75410 805 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 TNFRSF21O75509 655 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 RECQL4O94761 1208 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 SGPL1O95470 568 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 THBS1P07996 1170 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 H2AFZP0C0S5 128 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 TMEM253P0C7T8 217 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 P4HA1P13674 534 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 CYP3A5P20815 502 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 GTF2F1P35269 517 aaKnown RBP eCLIP8.17□□□□□ -1.12e-7■■■■■ 32
CDC42-205ENST00000498236 THPOP40225 353 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 USP8P40818 1118 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 ASPAP45381 313 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 CDK7P50613 346 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 RBP5P82980 135 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 FMO1Q01740 532 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 IFI16Q16666 785 aaKnown RBP8.17□□□□□ -1.1
CDC42-205ENST00000498236 FBXO47Q5MNV8 452 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 SPOPLQ6IQ16 392 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 PPP1R2P3Q6NXS1 205 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 H2AFVQ71UI9 128 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 MRPL10Q7Z7H8 261 aaKnown RBP8.17□□□□□ -1.1
CDC42-205ENST00000498236 SLC35F6Q8N357 371 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 LRRC52Q8N7C0 313 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 SMG8Q8ND04 991 aaKnown RBP8.17□□□□□ -1.1
CDC42-205ENST00000498236 FBF1Q8TES7 1133 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 U2AF1L4Q8WU68 220 aaKnown RBP8.17□□□□□ -1.1
CDC42-205ENST00000498236 SLC20A1Q8WUM9 679 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 UBE2Q2Q8WVN8 375 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 NOX5Q96PH1 765 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 NAPGQ99747 312 aaPredicted RBP8.17□□□□□ -1.1
CDC42-205ENST00000498236 NXF3Q9H4D5 531 aaKnown RBP8.17□□□□□ -1.1
CDC42-205ENST00000498236 CYP3A43Q9HB55 503 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 ERVK-5Q9HDB9 667 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 DPP3Q9NY33 737 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 SNTG2Q9NY99 539 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 TRIM10Q9UDY6 481 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 PARP2Q9UGN5 583 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 ST3GAL5Q9UNP4 418 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 R3HCC1Q9Y3T6 440 aaKnown RBP8.17□□□□□ -1.1
CDC42-205ENST00000498236 IPPQ9Y573 584 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 PCDHGC5Q9Y5F6 944 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 DUSP10Q9Y6W6 482 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 NCANO14594 1321 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 SMIM28A0A1B0GU29 152 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 MACROD2A1Z1Q3 448 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 ARVCFO00192 962 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 KHNYNO15037 678 aaKnown RBP8.16□□□□□ -1.1
CDC42-205ENST00000498236 XPOTO43592 962 aaKnown RBP8.16□□□□□ -1.1
CDC42-205ENST00000498236 ZNF623O75123 536 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 RTN2O75298 545 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 CD4P01730 458 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 ITGB3P05106 788 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 KRT5P13647 590 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 RAB27AP51159 221 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 GALCP54803 685 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 HADHBP55084 474 aaKnown RBP8.16□□□□□ -1.1
CDC42-205ENST00000498236 AMPD2Q01433 879 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 TNP2Q05952 138 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 UBAP2LQ14157 1087 aaKnown RBP8.16□□□□□ -1.1
CDC42-205ENST00000498236 DBN1Q16643 649 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 UMODL1Q5DID0 1318 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 ZNF667Q5HYK9 610 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 PAPD7Q5XG87 772 aaKnown RBP8.16□□□□□ -1.1
CDC42-205ENST00000498236 SCARA3Q6AZY7 606 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 TWF2Q6IBS0 349 aaKnown RBP8.16□□□□□ -1.1
CDC42-205ENST00000498236 TMEM270Q6UE05 265 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 TRIM72Q6ZMU5 477 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 HACE1Q8IYU2 909 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 RPUSD2Q8IZ73 545 aaKnown RBP8.16□□□□□ -1.1
CDC42-205ENST00000498236 RBBP8NLQ8NC74 664 aaPredicted RBP8.16□□□□□ -1.1
CDC42-205ENST00000498236 BEST2Q8NFU1 509 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 MYRIPQ8NFW9 859 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 CAGE1Q8TC20 777 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 HPDLQ96IR7 371 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 ZMAT2Q96NC0 199 aaKnown RBP8.16□□□□□ -1.1
CDC42-205ENST00000498236 ALS2CR12Q96Q35 445 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 PCDHB18PQ96TA0 734 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 PACSIN1Q9BY11 444 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 STARD7Q9NQZ5 370 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 CISHQ9NSE2 258 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 TRMT13Q9NUP7 481 aaKnown RBP8.16□□□□□ -1.1
CDC42-205ENST00000498236 SALL4Q9UJQ4 1053 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 FOXD3Q9UJU5 478 aaPredicted RBP8.16□□□□□ -1.1
CDC42-205ENST00000498236 OGDHLQ9ULD0 1010 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 UBQLN1Q9UMX0 589 aaKnown RBP8.16□□□□□ -1.1
CDC42-205ENST00000498236 TFR2Q9UP52 801 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 JRKLQ9Y4A0 524 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 PCDHB4Q9Y5E5 795 aa8.16□□□□□ -1.1
CDC42-205ENST00000498236 CITO14578 2027 aa8.15□□□□□ -1.1
CDC42-205ENST00000498236 DCDC2BA2VCK2 349 aa8.15□□□□□ -1.1
CDC42-205ENST00000498236 PIRO00625 290 aa8.15□□□□□ -1.1
CDC42-205ENST00000498236 INPPL1O15357 1258 aa8.15□□□□□ -1.1
CDC42-205ENST00000498236 MTA2O94776 668 aa8.15□□□□□ -1.1
CDC42-205ENST00000498236 LSM8O95777 96 aaKnown RBP8.15□□□□□ -1.1
CDC42-205ENST00000498236 CYP1A1P04798 512 aaPredicted RBP8.15□□□□□ -1.1
CDC42-205ENST00000498236 MMEP08473 750 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms