RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 POSTNQ15063 836 aa15.33■□□□□ 0.04
VARS-228ENST00000495010 DDR2Q16832 855 aa15.33■□□□□ 0.04
VARS-228ENST00000495010 ZC2HC1CQ53FD0 456 aaPredicted RBP15.33■□□□□ 0.04
VARS-228ENST00000495010 NT5DC4Q86YG4 428 aa15.33■□□□□ 0.04
VARS-228ENST00000495010 TMEM206Q9H813 350 aa15.33■□□□□ 0.04
VARS-228ENST00000495010 TMLHEQ9NVH6 421 aa15.33■□□□□ 0.04
VARS-228ENST00000495010 DDX43Q9NXZ2 648 aaKnown RBP15.33■□□□□ 0.04
VARS-228ENST00000495010 INVSQ9Y283 1065 aa15.33■□□□□ 0.04
VARS-228ENST00000495010 WNT6Q9Y6F9 365 aa15.33■□□□□ 0.04
VARS-228ENST00000495010 SCN1AP35498 2009 aa15.33■□□□□ 0.04
VARS-228ENST00000495010 CYP2F1P24903 491 aa15.32■□□□□ 0.04
VARS-228ENST00000495010 TFAMQ00059 246 aaKnown RBP15.32■□□□□ 0.04
VARS-228ENST00000495010 SH3PXD2AQ5TCZ1 1133 aa15.32■□□□□ 0.04
VARS-228ENST00000495010 NAIF1Q69YI7 327 aaPredicted RBP15.32■□□□□ 0.04
VARS-228ENST00000495010 UNQ6494/PRO21346Q6UXR6 183 aa15.32■□□□□ 0.04
VARS-228ENST00000495010 CYP2U1Q7Z449 544 aa15.32■□□□□ 0.04
VARS-228ENST00000495010 TTC30AQ86WT1 665 aa15.32■□□□□ 0.04
VARS-228ENST00000495010 KRI1Q8N9T8 703 aaKnown RBP15.32■□□□□ 0.04
VARS-228ENST00000495010 RIN3Q8TB24 985 aa15.32■□□□□ 0.04
VARS-228ENST00000495010 CACTINQ8WUQ7 758 aaKnown RBP15.32■□□□□ 0.04
VARS-228ENST00000495010 LEO1Q8WVC0 666 aaPredicted RBP15.32■□□□□ 0.04
VARS-228ENST00000495010 RAD54LQ92698 747 aa15.32■□□□□ 0.04
VARS-228ENST00000495010 TRMT2BQ96GJ1 504 aaKnown RBP15.32■□□□□ 0.04
VARS-228ENST00000495010 CYP2S1Q96SQ9 504 aa15.32■□□□□ 0.04
VARS-228ENST00000495010 ACBD6Q9BR61 282 aa15.32■□□□□ 0.04
VARS-228ENST00000495010 ABCB6Q9NP58 842 aa15.32■□□□□ 0.04
VARS-228ENST00000495010 TMEM9BQ9NQ34 198 aa15.32■□□□□ 0.04
VARS-228ENST00000495010 RALYQ9UKM9 306 aaKnown RBP15.32■□□□□ 0.04
VARS-228ENST00000495010 AGAP1Q9UPQ3 857 aa15.32■□□□□ 0.04
VARS-228ENST00000495010 USP24Q9UPU5 2620 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 EML5Q05BV3 1969 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 C1QTNF9BB2RNN3 333 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 TISP43B9A030 160 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 NOL4O94818 638 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 C1QTNF9P0C862 333 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 PLCG1P19174 1290 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 POLR2BP30876 1174 aaKnown RBP15.31■□□□□ 0.04
VARS-228ENST00000495010 SEC13P55735 322 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 KCNB1Q14721 858 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 ZNF77Q15935 545 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 SPATA2LQ8IUW3 424 aaPredicted RBP15.31■□□□□ 0.04
VARS-228ENST00000495010 SCN4BQ8IWT1 228 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 EFCAB13Q8IY85 973 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 TMEM86AQ8N2M4 240 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 PDCL2Q8N4E4 241 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 LARP4BQ92615 738 aaKnown RBP15.31■□□□□ 0.04
VARS-228ENST00000495010 TPSD1Q9BZJ3 242 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 BLOC1S4Q9NUP1 217 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 EXOC7Q9UPT5 735 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 R3HCC1Q9Y3T6 440 aaKnown RBP15.31■□□□□ 0.04
VARS-228ENST00000495010 STYXL1Q9Y6J8 313 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 DENND4CQ5VZ89 1909 aa15.31■□□□□ 0.04
VARS-228ENST00000495010 LNP1A1A4G5 178 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 GIPC1O14908 333 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 NFATC1O95644 943 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 ITGB3P05106 788 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 ACAT1P24752 427 aaKnown RBP15.3■□□□□ 0.04
VARS-228ENST00000495010 DHPSP49366 369 aaPredicted RBP15.3■□□□□ 0.04
VARS-228ENST00000495010 PDE6CP51160 858 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 USP4Q13107 963 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 EML3Q32P44 896 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 UAP1L1Q3KQV9 507 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 C2orf27AQ580R0 203 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 INTS6LQ5JSJ4 861 aaKnown RBP15.3■□□□□ 0.04
VARS-228ENST00000495010 PMS2CLQ68D20 193 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 ANO7Q6IWH7 933 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 ARL14EPQ8N8R7 260 aaPredicted RBP15.3■□□□□ 0.04
VARS-228ENST00000495010 SH3RF2Q8TEC5 729 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 HVCN1Q96D96 273 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 MYRFLQ96LU7 910 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 FIZ1Q96SL8 496 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 FAM213AQ9BRX8 229 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 ST6GALNAC4Q9H4F1 302 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 GTF3C4Q9UKN8 822 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 ZMIZ1Q9ULJ6 1067 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 CIZ1Q9ULV3 898 aaPredicted RBP15.3■□□□□ 0.04
VARS-228ENST00000495010 L1RE1Q9UN81 338 aa15.3■□□□□ 0.04
VARS-228ENST00000495010 TADA3O75528 432 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 ALDH1A2O94788 518 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 BMP15O95972 392 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 KRT19P08727 400 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 CEACAM1P13688 526 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 HDCP19113 662 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 PCSK1P29120 753 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 LONP1P36776 959 aaKnown RBP15.29■□□□□ 0.04
VARS-228ENST00000495010 LHX1P48742 406 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 CRELD2Q6UXH1 353 aaPredicted RBP15.29■□□□□ 0.04
VARS-228ENST00000495010 ZNF720Q7Z2F6 126 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 CSGALNACT2Q8N6G5 542 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 NOC3LQ8WTT2 800 aaKnown RBP15.29■□□□□ 0.04
VARS-228ENST00000495010 PIGKQ92643 395 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 EZH1Q92800 747 aaPredicted RBP15.29■□□□□ 0.04
VARS-228ENST00000495010 SLC22A12Q96S37 553 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 LINC00597Q9H2U6 94 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 PPP4R2Q9NY27 417 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 SNX9Q9Y5X1 595 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 OBSL1O75147 1896 aa15.29■□□□□ 0.04
VARS-228ENST00000495010 C2orf78A6NCI8 922 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 MAP3K13O43283 966 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 LDHAP00338 332 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms