RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, human

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-204	ENST00000478061	TPM4	P67936	248 aa		13.62	□□□□□ -0.23
RBM28-204	ENST00000478061	CYP27A1	Q02318	531 aa		13.62	□□□□□ -0.23
RBM28-204	ENST00000478061	TWF1	Q12792	350 aa		13.62	□□□□□ -0.23
RBM28-204	ENST00000478061	PUS10	Q3MIT2	529 aa	Known RBP	13.62	□□□□□ -0.23
RBM28-204	ENST00000478061	MGAT5B	Q3V5L5	792 aa		13.62	□□□□□ -0.23
RBM28-204	ENST00000478061	FKBP15	Q5T1M5	1219 aa		13.62	□□□□□ -0.23
RBM28-204	ENST00000478061	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM28-204	ENST00000478061	CYP26C1	Q6V0L0	522 aa		13.62	□□□□□ -0.23
RBM28-204	ENST00000478061	C12orf29	Q8N999	325 aa		13.62	□□□□□ -0.23
RBM28-204	ENST00000478061	SLC4A11	Q8NBS3	891 aa		13.62	□□□□□ -0.23
RBM28-204	ENST00000478061	ASB2	Q96Q27	587 aa		13.62	□□□□□ -0.23
RBM28-204	ENST00000478061	SEPT5	Q99719	369 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM28-204	ENST00000478061	LSM14B	Q9BX40	385 aa	Known RBP	13.62	□□□□□ -0.23
RBM28-204	ENST00000478061	ZNF518B	Q9C0D4	1074 aa		13.62	□□□□□ -0.23
RBM28-204	ENST00000478061	APEX2	Q9UBZ4	518 aa		13.62	□□□□□ -0.23
RBM28-204	ENST00000478061	CCDC130	P13994	396 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	ATF6	P18850	670 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	BDNF	P23560	247 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	MTHFR	P42898	656 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	GPR15	P49685	360 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	MFAP3	P55082	362 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	UBXN1	Q04323	297 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	PLD1	Q13393	1074 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	ATAT1	Q5SQI0	421 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	KLHDC7A	Q5VTJ3	777 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	TMEM270	Q6UE05	265 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	PAQR9	Q6ZVX9	377 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	ENOSF1	Q7L5Y1	443 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	FUK	Q8N0W3	1084 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	JAKMIP2	Q96AA8	810 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	TMEM176A	Q96HP8	235 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	HEXIM2	Q96MH2	286 aa	Known RBP	13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	RIPOR3	Q96MK2	946 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	PIDD1	Q9HB75	910 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	RTN4	Q9NQC3	1192 aa	Known RBP	13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	FAM49B	Q9NUQ9	324 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	CEP72	Q9P209	647 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	DNAJC12	Q9UKB3	198 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	SIK3	Q9Y2K2	1263 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	PCDHB4	Q9Y5E5	795 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061	XIRP2	A4UGR9	3374 aa		13.61	□□□□□ -0.23
RBM28-204	ENST00000478061		A0A1B0GTH6	734 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	RNF225	M0QZC1	329 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	TEX33	O43247	280 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	TRIM21	P19474	475 aa	Known RBP	13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	KLK7	P49862	253 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	ZNF132	P52740	706 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	EPHB3	P54753	998 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	RPL10A	P62906	217 aa	Known RBP	13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	FANCC	Q00597	558 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	CBX2	Q14781	532 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	SYCP1	Q15431	976 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	SMAD2	Q15796	467 aa	Known RBP	13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	DDR2	Q16832	855 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	SDHAF4	Q5VUM1	108 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	VSTM1	Q6UX27	236 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	FAM35A	Q86V20	835 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	SCN4B	Q8IWT1	228 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	RNF214	Q8ND24	703 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	SLC2A14	Q8TDB8	520 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	GIPC2	Q8TF65	315 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	FAM81B	Q96LP2	452 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	NECTIN4	Q96NY8	510 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	ERGIC2	Q96RQ1	377 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	HNRNPAB	Q99729	332 aa	Known RBP	13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	DNAI2	Q9GZS0	605 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	POMK	Q9H5K3	350 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	WDR6	Q9NNW5	1121 aa	Known RBP	13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	PLCB1	Q9NQ66	1216 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	TMEM30A	Q9NV96	361 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	HCFC1R1	Q9NWW0	138 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	DNMT3B	Q9UBC3	853 aa	Known RBP	13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	CNTN6	Q9UQ52	1028 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	FAM50B	Q9Y247	325 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	ATP8B3	O60423	1300 aa		13.6	□□□□□ -0.23
RBM28-204	ENST00000478061	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	EPHB6	O15197	1021 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	NOL4	O94818	638 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	SERPINC1	P01008	464 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	RHO	P08100	348 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	BMP1	P13497	986 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	KRT5	P13647	590 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	IL9	P15248	144 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	UCHL3	P15374	230 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	CACNA2D1	P54289	1103 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	NTHL1	P78549	312 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	ARHGAP44	Q17R89	818 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	FILIP1L	Q4L180	1135 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	IQCE	Q6IPM2	695 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	ELMOD1	Q8N336	334 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	GPR152	Q8TDT2	470 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	SHC3	Q92529	594 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	CYFIP2	Q96F07	1278 aa		13.59	□□□□□ -0.23
RBM28-204	ENST00000478061	ZNF512	Q96ME7	567 aa	Predicted RBP	13.59	□□□□□ -0.23

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