RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	SPATA31A3	Q5VYP0	1347 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334		A0A087X1B8	175 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	MBD3L4	A6NDZ8	208 aa	Predicted RBP	5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	MBD3L3	A6NE82	208 aa	Predicted RBP	5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	POM121B	A6NF01	834 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	hCG_1984214	I3L0E3	225 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	IL18RAP	O95256	599 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	PARP1	P09874	1014 aa	Known RBP	5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	IFIT2	P09913	472 aa	Known RBP	5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	XRCC6	P12956	609 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	KLRC1	P26715	233 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	CASP5	P51878	434 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	WNT3	P56703	355 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	SATB1	Q01826	763 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	DAG1	Q14118	895 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	UBE4A	Q14139	1066 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	ZIK1	Q3SY52	487 aa	Predicted RBP	5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	ARHGAP40	Q5TG30	622 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	ABHD17B	Q5VST6	288 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	KLHDC7A	Q5VTJ3	777 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	UNC13D	Q70J99	1090 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	GAS2L3	Q86XJ1	694 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	B3GALNT2	Q8NCR0	500 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	TOR1AIP2	Q8NFQ8	470 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	SVIP	Q8NHG7	77 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	TNIP3	Q96KP6	325 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	SNX22	Q96L94	193 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	BRIP1	Q9BX63	1249 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	TPSD1	Q9BZJ3	242 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	ZSCAN32	Q9NX65	697 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	HDAC9	Q9UKV0	1011 aa		5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	MRPS17	Q9Y2R5	130 aa	Known RBP	5.18	□□□□□ -1.58
RBM39-231	ENST00000477334	FOXN3	O00409	490 aa	Predicted RBP	5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	MT-ND5	P03915	603 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	IL1R1	P14778	569 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	STT3A	P46977	705 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	ALDH5A1	P51649	535 aa	Predicted RBP	5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	HNRNPM	P52272	730 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	AK2	P54819	239 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	HDAC1	Q13547	482 aa	Predicted RBP	5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	MGAT5B	Q3V5L5	792 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	ZNF627	Q7L945	461 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	MRGPRG	Q86SM5	289 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	SLC44A3	Q8N4M1	653 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	MYCBPAP	Q8TBZ2	947 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	OSBPL9	Q96SU4	736 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	PRRX2	Q99811	253 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	AIFM2	Q9BRQ8	373 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	PTDSS2	Q9BVG9	487 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	ACTRT3	Q9BYD9	372 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	AMBRA1	Q9C0C7	1298 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	CHST8	Q9H2A9	424 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	CYP4F11	Q9HBI6	524 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	FNIP2	Q9P278	1114 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	MID2	Q9UJV3	735 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	SERTAD3	Q9UJW9	196 aa		5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	NDRG4	Q9ULP0	352 aa	Known RBP	5.17	□□□□□ -1.58
RBM39-231	ENST00000477334	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
RBM39-231	ENST00000477334		H7C4K7	107 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	NCK2	O43639	380 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	PDHA1	P08559	390 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	SRGN	P10124	158 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	TSHR	P16473	764 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	TNFSF4	P23510	183 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	LRPAP1	P30533	357 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	TM4SF4	P48230	202 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	CARS	P49589	748 aa	Known RBP	5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	HTRA4	P83105	476 aa	Predicted RBP	5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	MYO1E	Q12965	1108 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	RGS7BP	Q6MZT1	257 aa	Predicted RBP	5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	VWA1	Q6PCB0	445 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	PCSK4	Q6UW60	755 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	SRL	Q86TD4	932 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	ULK2	Q8IYT8	1036 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	LNX2	Q8N448	690 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	CAVIN3	Q969G5	261 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	FAM136A	Q96C01	138 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	CCDC138	Q96M89	665 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	RIPOR3	Q96MK2	946 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	PPP1R9B	Q96SB3	815 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	MYD88	Q99836	296 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	TBC1D23	Q9NUY8	699 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	KCTD5	Q9NXV2	234 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	DMTF1	Q9Y222	760 aa		5.16	□□□□□ -1.58
RBM39-231	ENST00000477334	LOC102723971	A0A1B0GUV8	181 aa		5.15	□□□□□ -1.59
RBM39-231	ENST00000477334	RAB27B	O00194	218 aa		5.15	□□□□□ -1.59
RBM39-231	ENST00000477334	PPM1D	O15297	605 aa		5.15	□□□□□ -1.59
RBM39-231	ENST00000477334	YY2	O15391	372 aa		5.15	□□□□□ -1.59
RBM39-231	ENST00000477334	ANXA2	P07355	339 aa	Known RBP	5.15	□□□□□ -1.59
RBM39-231	ENST00000477334	RHO	P08100	348 aa		5.15	□□□□□ -1.59
RBM39-231	ENST00000477334	HKR1	P10072	659 aa		5.15	□□□□□ -1.59
RBM39-231	ENST00000477334	TXN	P10599	105 aa	Known RBP	5.15	□□□□□ -1.59
RBM39-231	ENST00000477334	DGKE	P52429	567 aa		5.15	□□□□□ -1.59
RBM39-231	ENST00000477334	ITGA8	P53708	1063 aa		5.15	□□□□□ -1.59
RBM39-231	ENST00000477334	PRKAG1	P54619	331 aa		5.15	□□□□□ -1.59
RBM39-231	ENST00000477334	SP2	Q02086	613 aa		5.15	□□□□□ -1.59
RBM39-231	ENST00000477334	EIF2B5	Q13144	721 aa	Known RBP	5.15	□□□□□ -1.59
RBM39-231	ENST00000477334	E2F2	Q14209	437 aa		5.15	□□□□□ -1.59
RBM39-231	ENST00000477334	BRD3	Q15059	726 aa		5.15	□□□□□ -1.59
RBM39-231	ENST00000477334	RRAGB	Q5VZM2	374 aa		5.15	□□□□□ -1.59

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